| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008314
Identifier: 150008314
GI number: 150008314
Start: 1994762
End: 1996408
Strand: Direct
Name: 150008314
Synonym: BDI_1683
Alternate gene names: NA
Gene position: 1994762-1996408 (Clockwise)
Preceding gene: 150008313
Following gene: 150008315
Centisome position: 41.46
GC content: 49.61
Gene sequence:
>1647_bases ATGAAACGATTCAATATAATTATCACGTTATCCGCCACCTTAGGACTATTCAGTTGTGAGCTGGATAAAATGCCAATGGA TCAAGTGTCGGACGCTGTATTCTGGCAAAAGCCGGCCGACTTTGAATTGGCCGCCAACGATTTCTATTTTGGGCTCCAAG AGGTCTCCCAATATATAGACATGAACTCGGATATCGCCTTTGGTTCCGGCACGAACGATGTCAGCGACGGTTCCTATCTG GCCCCGGTCAACTCGGATGATTGGGACAACCCATGGAAATTTGTCCAATCTACCTCTTATTTGCTTAAGAAAGCGGAGGA ATCCGGTTTGTCGGACGAAGAGATCGGACGTTGGAAAGCAGAAGCGCATTTCTTCCGTGCCTACAACTATTGGAAATTGG TGAAAACTTATGGAGGAGTGCCTAAGATAGACATCCCGTTAAATACCTCCTCGGAGGAACTTTACACACCTCGTTCCAGC CAACAGGAGATCATCGATTTTATTATCGAGGACTTGGATAAGGCCATTCCTCTCCTTCCGAAGCAAAGCGGACTGACCGC TGAGGAATTAGGACGTACCACGCAAGGGGCGGCATTAGCTCTCAAGGCCCGTGCGGCCTTGTTCGAAGGAACTTGGCAAA AATACCACGGGATGGCGGACGCAGGCAAATACCTCGACCTAGCTATCCAAGCGGCCCAAGCCATTGTCGATTCCAAGGAG TATGAACTATATCGCGAGAAAGGAGAACTCAGTTACAAATATCTTCATATCCTAGAAGGCGACGACAGCAAGGAAGTCTT GTTGGCAAGACGGTATTACAAATTGAGAGCGACTCATAACTGGACCCGGGAACTATTATTAGGTGCCATGGTACCGACAA AGAACCTTGCGGACGTATACCTTTGTACCGATGGTTTACCTATCGATAAATCCAAGTTGTTCAAAGGATTCCAAACCCAG ACAAGCGAATTTGAGAACCGGGATTCCCGGATGGCGCAAACGTTTGTCGTACCCGGTAGCGAGATATTCTCGGAAGGGGG CGGATGGGCAACCGTAGAGCCGGGATTCATCGGTAACAATTCCACCCGGACCGGATACATGATCCGCAAGTTTATGGATG AAACGCTGGATGCCGTACAATTCATTGGGGAATACGATTTCAAGGAATTCCGTTACGGAGAGGTCCTATTAATCTTGGCC GAGGCTTTATACGAGAAGAACGGACAGATCACGGACGAGCAATTAGACCTGACCATTAATGACCTGCGAAACCGGGCGAA TATGCCTCGCTTGACCAATGCGTTTGTAGCGACGAACGGACTGAATATGCAGGAAGAGATCCGGCGTGAGAGAACCGTGG AACTGGCATTCGAAGGATACCGTCGGGACGACCTACGTCGTTGGGGCACGGCAGAAACAGTTCTTCCCCTTGCGATCCGT GGCGTGAAATTCGTGGGTACGGAGTATCAACAGAAATTCCCGGAGTTGGTGATCGGACAGGATATACAGGTGGATAGCGA AGGCTTTATCATCGCCCAACCTGCGTCCGCCCGCAAGTTCCAGACACCGAAGCATTGGCTATCCCCGATCCCTTTGCAAC AGGTACAATTGTCGAAAGGAACCTTGGAACAGAACCCGGGTTGGTAA
Upstream 100 bases:
>100_bases AGAGTCTGACACTGGAGGTTTCAACTATCCGTTCCAACGTTACTACTCATTTGGTATCGACTTGACTTTCTAAGGTTTTC TATTTAATAAAACGAATATT
Downstream 100 bases:
>100_bases GGGTTTTTCCAAGAATAAGCGACTATATACATGAGGGTAGGCCCAACCTATACGAGAAGGGAGGGCCTACCTATCTGGGA GGGGAATCCCATTTAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 548; Mature: 548
Protein sequence:
>548_residues MKRFNIIITLSATLGLFSCELDKMPMDQVSDAVFWQKPADFELAANDFYFGLQEVSQYIDMNSDIAFGSGTNDVSDGSYL APVNSDDWDNPWKFVQSTSYLLKKAEESGLSDEEIGRWKAEAHFFRAYNYWKLVKTYGGVPKIDIPLNTSSEELYTPRSS QQEIIDFIIEDLDKAIPLLPKQSGLTAEELGRTTQGAALALKARAALFEGTWQKYHGMADAGKYLDLAIQAAQAIVDSKE YELYREKGELSYKYLHILEGDDSKEVLLARRYYKLRATHNWTRELLLGAMVPTKNLADVYLCTDGLPIDKSKLFKGFQTQ TSEFENRDSRMAQTFVVPGSEIFSEGGGWATVEPGFIGNNSTRTGYMIRKFMDETLDAVQFIGEYDFKEFRYGEVLLILA EALYEKNGQITDEQLDLTINDLRNRANMPRLTNAFVATNGLNMQEEIRRERTVELAFEGYRRDDLRRWGTAETVLPLAIR GVKFVGTEYQQKFPELVIGQDIQVDSEGFIIAQPASARKFQTPKHWLSPIPLQQVQLSKGTLEQNPGW
Sequences:
>Translated_548_residues MKRFNIIITLSATLGLFSCELDKMPMDQVSDAVFWQKPADFELAANDFYFGLQEVSQYIDMNSDIAFGSGTNDVSDGSYL APVNSDDWDNPWKFVQSTSYLLKKAEESGLSDEEIGRWKAEAHFFRAYNYWKLVKTYGGVPKIDIPLNTSSEELYTPRSS QQEIIDFIIEDLDKAIPLLPKQSGLTAEELGRTTQGAALALKARAALFEGTWQKYHGMADAGKYLDLAIQAAQAIVDSKE YELYREKGELSYKYLHILEGDDSKEVLLARRYYKLRATHNWTRELLLGAMVPTKNLADVYLCTDGLPIDKSKLFKGFQTQ TSEFENRDSRMAQTFVVPGSEIFSEGGGWATVEPGFIGNNSTRTGYMIRKFMDETLDAVQFIGEYDFKEFRYGEVLLILA EALYEKNGQITDEQLDLTINDLRNRANMPRLTNAFVATNGLNMQEEIRRERTVELAFEGYRRDDLRRWGTAETVLPLAIR GVKFVGTEYQQKFPELVIGQDIQVDSEGFIIAQPASARKFQTPKHWLSPIPLQQVQLSKGTLEQNPGW >Mature_548_residues MKRFNIIITLSATLGLFSCELDKMPMDQVSDAVFWQKPADFELAANDFYFGLQEVSQYIDMNSDIAFGSGTNDVSDGSYL APVNSDDWDNPWKFVQSTSYLLKKAEESGLSDEEIGRWKAEAHFFRAYNYWKLVKTYGGVPKIDIPLNTSSEELYTPRSS QQEIIDFIIEDLDKAIPLLPKQSGLTAEELGRTTQGAALALKARAALFEGTWQKYHGMADAGKYLDLAIQAAQAIVDSKE YELYREKGELSYKYLHILEGDDSKEVLLARRYYKLRATHNWTRELLLGAMVPTKNLADVYLCTDGLPIDKSKLFKGFQTQ TSEFENRDSRMAQTFVVPGSEIFSEGGGWATVEPGFIGNNSTRTGYMIRKFMDETLDAVQFIGEYDFKEFRYGEVLLILA EALYEKNGQITDEQLDLTINDLRNRANMPRLTNAFVATNGLNMQEEIRRERTVELAFEGYRRDDLRRWGTAETVLPLAIR GVKFVGTEYQQKFPELVIGQDIQVDSEGFIIAQPASARKFQTPKHWLSPIPLQQVQLSKGTLEQNPGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62266; Mature: 62266
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFNIIITLSATLGLFSCELDKMPMDQVSDAVFWQKPADFELAANDFYFGLQEVSQYID CCEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHC MNSDIAFGSGTNDVSDGSYLAPVNSDDWDNPWKFVQSTSYLLKKAEESGLSDEEIGRWKA CCCCEEECCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH EAHFFRAYNYWKLVKTYGGVPKIDIPLNTSSEELYTPRSSQQEIIDFIIEDLDKAIPLLP HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCC KQSGLTAEELGRTTQGAALALKARAALFEGTWQKYHGMADAGKYLDLAIQAAQAIVDSKE CCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHH YELYREKGELSYKYLHILEGDDSKEVLLARRYYKLRATHNWTRELLLGAMVPTKNLADVY HHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEE LCTDGLPIDKSKLFKGFQTQTSEFENRDSRMAQTFVVPGSEIFSEGGGWATVEPGFIGNN EECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHEEECCCHHHHHCCCCEEEECCCCCCCC STRTGYMIRKFMDETLDAVQFIGEYDFKEFRYGEVLLILAEALYEKNGQITDEQLDLTIN CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCCCCHHHCEEHH DLRNRANMPRLTNAFVATNGLNMQEEIRRERTVELAFEGYRRDDLRRWGTAETVLPLAIR HHHHHCCCCCHHHHEEEECCCCHHHHHHHHHHHEEHHCCCCHHHHHHCCCHHHHHHHHHC GVKFVGTEYQQKFPELVIGQDIQVDSEGFIIAQPASARKFQTPKHWLSPIPLQQVQLSKG CCCEECCHHHHHCCHHCCCCCEEECCCCEEEECCCCCCCCCCCHHHCCCCCHHHHHCCCC TLEQNPGW CCCCCCCC >Mature Secondary Structure MKRFNIIITLSATLGLFSCELDKMPMDQVSDAVFWQKPADFELAANDFYFGLQEVSQYID CCEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHC MNSDIAFGSGTNDVSDGSYLAPVNSDDWDNPWKFVQSTSYLLKKAEESGLSDEEIGRWKA CCCCEEECCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH EAHFFRAYNYWKLVKTYGGVPKIDIPLNTSSEELYTPRSSQQEIIDFIIEDLDKAIPLLP HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCC KQSGLTAEELGRTTQGAALALKARAALFEGTWQKYHGMADAGKYLDLAIQAAQAIVDSKE CCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHH YELYREKGELSYKYLHILEGDDSKEVLLARRYYKLRATHNWTRELLLGAMVPTKNLADVY HHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEE LCTDGLPIDKSKLFKGFQTQTSEFENRDSRMAQTFVVPGSEIFSEGGGWATVEPGFIGNN EECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHEEECCCHHHHHCCCCEEEECCCCCCCC STRTGYMIRKFMDETLDAVQFIGEYDFKEFRYGEVLLILAEALYEKNGQITDEQLDLTIN CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCCCCHHHCEEHH DLRNRANMPRLTNAFVATNGLNMQEEIRRERTVELAFEGYRRDDLRRWGTAETVLPLAIR HHHHHCCCCCHHHHEEEECCCCHHHHHHHHHHHEEHHCCCCHHHHHHCCCHHHHHHHHHC GVKFVGTEYQQKFPELVIGQDIQVDSEGFIIAQPASARKFQTPKHWLSPIPLQQVQLSKG CCCEECCHHHHHCCHHCCCCCEEECCCCEEEECCCCCCCCCCCHHHCCCCCHHHHHCCCC TLEQNPGW CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA