Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is fecR [C]

Identifier: 150008312

GI number: 150008312

Start: 1990122

End: 1991135

Strand: Direct

Name: fecR [C]

Synonym: BDI_1681

Alternate gene names: 150008312

Gene position: 1990122-1991135 (Clockwise)

Preceding gene: 150008310

Following gene: 150008313

Centisome position: 41.36

GC content: 45.66

Gene sequence:

>1014_bases
ATGGAAGAAGAAAACAAATATATAAGCGATTTATTAATCCGATATGTAAATGGACTCTATACACGGAACGATATAGAGAC
CTTGCGGAAGCTAGCCGCATCCATAACCGAGCGAGCAGAATTAGAAAGCGAAATGGACCGGGTCTGGAACGAGGCGCAAG
ACTTACCTCAATCCGATTCCCATAATCATCTGCTTTATAAGAAGGAGGCGCAAGACCTGTTGGATAAGACACGTAAAAGA
GAAAGAAGAATCTCCCTATCCACTTTCATCAAGTACGCGGCGAGCATAGCGATTATCGTTTCCATCGGATTCGGAGCGAA
ACTATACCTAAATCATTCAGCAAAGCAGCATACATCTGCCAGCGACCATCTCCTAACGGAAATAAGCGTCAATCATGGCG
AACATAAGCAAGTCACCCTTCCCGATGGCACGGTCGTTCATCTAAACGCCGGTACCGTCATGCGATACCCAACGGAATTT
ACCTCTGACATCCGTTTGGTAGAAATGGAAGGAGAAGCTTTTTTCAATGTCATGAGAGACGAGGGCAAGCCCTTCATCGT
CCGTACCCGGCAAGCCGACGTAAAAGTACTCGGAACCTCTTTCAACGTAAAAGCCTATCAAGAGGATGAGTTGATGGCCG
TCAGCGTTCGGACCGGAAAAGTTGAGGTGGATATGCCCGAAAGCGTAATGCGCCTATTACCGAACGAGCAGATAATCGTG
AATAACACAAATGGAGAGATTCTTAAAAAGAACGAGGACGCCCAAAAAGTAACGGCTTGGCTGCAAGGCGGCCTTTATTT
CAACCGGACACCTATCAGTAGCGTTATACACGATTTGGAGCGGATGTATAATCAAGAGATCGTACTCGATCCGAATGTCG
TATTCGACGATTACATCTATGGCGAGCACGACAATAAAAGTCTGGAAGCCGTACTGAACGCAATTCAATATTCAACCGGC
ATCCGATACCGGAAAGAAGAAAGTCGGATCGTGTTATATAAAACGAGTCATTAA

Upstream 100 bases:

>100_bases
ATATCGTTTCGCGAAGATAATAAAATCATATACTAATAAAAGTTAATGATATCCCAGTTCTCCCGGACTTCTTTGTACTA
TTAATATAGCACGAGAAATA

Downstream 100 bases:

>100_bases
CCTTAAAATCGATTTGCCCATGAAAGATACGACATAAGCTTAGCCACATAAAAAAGGGAAACCGACCTCTGACCTTCGAT
CTCCCTTTATCTTTCCCGAT

Product: putative anti-sigma factor

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MEEENKYISDLLIRYVNGLYTRNDIETLRKLAASITERAELESEMDRVWNEAQDLPQSDSHNHLLYKKEAQDLLDKTRKR
ERRISLSTFIKYAASIAIIVSIGFGAKLYLNHSAKQHTSASDHLLTEISVNHGEHKQVTLPDGTVVHLNAGTVMRYPTEF
TSDIRLVEMEGEAFFNVMRDEGKPFIVRTRQADVKVLGTSFNVKAYQEDELMAVSVRTGKVEVDMPESVMRLLPNEQIIV
NNTNGEILKKNEDAQKVTAWLQGGLYFNRTPISSVIHDLERMYNQEIVLDPNVVFDDYIYGEHDNKSLEAVLNAIQYSTG
IRYRKEESRIVLYKTSH

Sequences:

>Translated_337_residues
MEEENKYISDLLIRYVNGLYTRNDIETLRKLAASITERAELESEMDRVWNEAQDLPQSDSHNHLLYKKEAQDLLDKTRKR
ERRISLSTFIKYAASIAIIVSIGFGAKLYLNHSAKQHTSASDHLLTEISVNHGEHKQVTLPDGTVVHLNAGTVMRYPTEF
TSDIRLVEMEGEAFFNVMRDEGKPFIVRTRQADVKVLGTSFNVKAYQEDELMAVSVRTGKVEVDMPESVMRLLPNEQIIV
NNTNGEILKKNEDAQKVTAWLQGGLYFNRTPISSVIHDLERMYNQEIVLDPNVVFDDYIYGEHDNKSLEAVLNAIQYSTG
IRYRKEESRIVLYKTSH
>Mature_337_residues
MEEENKYISDLLIRYVNGLYTRNDIETLRKLAASITERAELESEMDRVWNEAQDLPQSDSHNHLLYKKEAQDLLDKTRKR
ERRISLSTFIKYAASIAIIVSIGFGAKLYLNHSAKQHTSASDHLLTEISVNHGEHKQVTLPDGTVVHLNAGTVMRYPTEF
TSDIRLVEMEGEAFFNVMRDEGKPFIVRTRQADVKVLGTSFNVKAYQEDELMAVSVRTGKVEVDMPESVMRLLPNEQIIV
NNTNGEILKKNEDAQKVTAWLQGGLYFNRTPISSVIHDLERMYNQEIVLDPNVVFDDYIYGEHDNKSLEAVLNAIQYSTG
IRYRKEESRIVLYKTSH

Specific function: Regulation Of Iron Dicitrate Transport. In The Absence Of Citrate Fecr Inactivates Feci. Fecr Is Probably A Sensor That Recognizes Iron Dicitrate In The Periplasm. [C]

COG id: COG3712

COG function: function code PT; Fe2+-dicitrate sensor, membrane component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38686; Mature: 38686

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEENKYISDLLIRYVNGLYTRNDIETLRKLAASITERAELESEMDRVWNEAQDLPQSDS
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
HNHLLYKKEAQDLLDKTRKRERRISLSTFIKYAASIAIIVSIGFGAKLYLNHSAKQHTSA
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEECCCHHCCCC
SDHLLTEISVNHGEHKQVTLPDGTVVHLNAGTVMRYPTEFTSDIRLVEMEGEAFFNVMRD
CCCEEEEEECCCCCCCEEECCCCEEEEEECCEEEECCCCCCCCEEEEEECCHHHHHHHHC
EGKPFIVRTRQADVKVLGTSFNVKAYQEDELMAVSVRTGKVEVDMPESVMRLLPNEQIIV
CCCEEEEEECCCCEEEEECEEEEEEECCCCEEEEEEECCEEEECCHHHHHHHCCCCEEEE
NNTNGEILKKNEDAQKVTAWLQGGLYFNRTPISSVIHDLERMYNQEIVLDPNVVFDDYIY
ECCCCCEEECCCHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHCCEEEECCCEEEECEEE
GEHDNKSLEAVLNAIQYSTGIRYRKEESRIVLYKTSH
CCCCCHHHHHHHHHHHHHCCCCEEECCCEEEEEEECC
>Mature Secondary Structure
MEEENKYISDLLIRYVNGLYTRNDIETLRKLAASITERAELESEMDRVWNEAQDLPQSDS
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
HNHLLYKKEAQDLLDKTRKRERRISLSTFIKYAASIAIIVSIGFGAKLYLNHSAKQHTSA
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEECCCHHCCCC
SDHLLTEISVNHGEHKQVTLPDGTVVHLNAGTVMRYPTEFTSDIRLVEMEGEAFFNVMRD
CCCEEEEEECCCCCCCEEECCCCEEEEEECCEEEECCCCCCCCEEEEEECCHHHHHHHHC
EGKPFIVRTRQADVKVLGTSFNVKAYQEDELMAVSVRTGKVEVDMPESVMRLLPNEQIIV
CCCEEEEEECCCCEEEEECEEEEEEECCCCEEEEEEECCEEEECCHHHHHHHCCCCEEEE
NNTNGEILKKNEDAQKVTAWLQGGLYFNRTPISSVIHDLERMYNQEIVLDPNVVFDDYIY
ECCCCCEEECCCHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHCCEEEECCCEEEECEEE
GEHDNKSLEAVLNAIQYSTGIRYRKEESRIVLYKTSH
CCCCCHHHHHHHHHHHHHCCCCEEECCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA