| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008227
Identifier: 150008227
GI number: 150008227
Start: 1865921
End: 1866367
Strand: Direct
Name: 150008227
Synonym: BDI_1593
Alternate gene names: NA
Gene position: 1865921-1866367 (Clockwise)
Preceding gene: 150008226
Following gene: 150008237
Centisome position: 38.78
GC content: 52.8
Gene sequence:
>447_bases ATGGGTAAGGCTTATTGTTTCTACCAGAATTACAGGGAGGTTCGCCTCCTTGTAATTCATTGCTCGGCTACACGATATGA CAGGGATTTTCCTGTGGAGGCGCTCCGTTCATCGCACAAGGCACGGGGATTCGCCGATATCGGCTATCATTTCTATATCA CACGGGACGGGGAATTACACCGCTGCCGGCCGGTCAATCAGATCGGGGCGCACGCAGCCGGATGGAACGACAAAAGTATC GGTATATGTTACGAGGGAGGACTCGACGAACAAGGCCGTCCAGCTGATACCCGGACCTACGCCCAGCGGTGTACCTTGAT GGATCTGCTACGGCAATTACGAAGGGACTATCCGGAGGCACGCATCCTAGGACATTACCAATTAAGCCCTTACATACGCA AGGCTTGCCCTTGCTTTGACGCAAGGGAGGAGTATCTCGTCTTATAA
Upstream 100 bases:
>100_bases TGGAGTACCATTATCAAAGTGATCATCGCCGTAGCTACCGCCATCGCGGGAGCACTTGGCATCCAATAATGTATTCTCTA ATTTTCAATTTTCAATTATC
Downstream 100 bases:
>100_bases AATAGATACCGGCTCGTCATTCACTCGCTAGATTGTCCGGTTTCACGACTTACTTTGTAAAAATACCCCCTATCTCTTTC AGCTCTTGCTCTTTATGATG
Product: putative N-acetylmuramoyl-L-alanine amidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MGKAYCFYQNYREVRLLVIHCSATRYDRDFPVEALRSSHKARGFADIGYHFYITRDGELHRCRPVNQIGAHAAGWNDKSI GICYEGGLDEQGRPADTRTYAQRCTLMDLLRQLRRDYPEARILGHYQLSPYIRKACPCFDAREEYLVL
Sequences:
>Translated_148_residues MGKAYCFYQNYREVRLLVIHCSATRYDRDFPVEALRSSHKARGFADIGYHFYITRDGELHRCRPVNQIGAHAAGWNDKSI GICYEGGLDEQGRPADTRTYAQRCTLMDLLRQLRRDYPEARILGHYQLSPYIRKACPCFDAREEYLVL >Mature_147_residues GKAYCFYQNYREVRLLVIHCSATRYDRDFPVEALRSSHKARGFADIGYHFYITRDGELHRCRPVNQIGAHAAGWNDKSIG ICYEGGLDEQGRPADTRTYAQRCTLMDLLRQLRRDYPEARILGHYQLSPYIRKACPCFDAREEYLVL
Specific function: Unknown
COG id: COG3023
COG function: function code V; Negative regulator of beta-lactamase expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage T3 and T7 N-acetylmuramoyl-L-alanine amidases [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002502 - InterPro: IPR018247 - InterPro: IPR015510 [H]
Pfam domain/function: PF01510 Amidase_2 [H]
EC number: NA
Molecular weight: Translated: 17272; Mature: 17141
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKAYCFYQNYREVRLLVIHCSATRYDRDFPVEALRSSHKARGFADIGYHFYITRDGELH CCCEEEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEECCEEEEEECCCCCC RCRPVNQIGAHAAGWNDKSIGICYEGGLDEQGRPADTRTYAQRCTLMDLLRQLRRDYPEA CCCCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC RILGHYQLSPYIRKACPCFDAREEYLVL EEEEEEECCHHHHHHCCCCCCCCCEECC >Mature Secondary Structure GKAYCFYQNYREVRLLVIHCSATRYDRDFPVEALRSSHKARGFADIGYHFYITRDGELH CCEEEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEECCEEEEEECCCCCC RCRPVNQIGAHAAGWNDKSIGICYEGGLDEQGRPADTRTYAQRCTLMDLLRQLRRDYPEA CCCCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC RILGHYQLSPYIRKACPCFDAREEYLVL EEEEEEECCHHHHHHCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]