Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is 150008227

Identifier: 150008227

GI number: 150008227

Start: 1865921

End: 1866367

Strand: Direct

Name: 150008227

Synonym: BDI_1593

Alternate gene names: NA

Gene position: 1865921-1866367 (Clockwise)

Preceding gene: 150008226

Following gene: 150008237

Centisome position: 38.78

GC content: 52.8

Gene sequence:

>447_bases
ATGGGTAAGGCTTATTGTTTCTACCAGAATTACAGGGAGGTTCGCCTCCTTGTAATTCATTGCTCGGCTACACGATATGA
CAGGGATTTTCCTGTGGAGGCGCTCCGTTCATCGCACAAGGCACGGGGATTCGCCGATATCGGCTATCATTTCTATATCA
CACGGGACGGGGAATTACACCGCTGCCGGCCGGTCAATCAGATCGGGGCGCACGCAGCCGGATGGAACGACAAAAGTATC
GGTATATGTTACGAGGGAGGACTCGACGAACAAGGCCGTCCAGCTGATACCCGGACCTACGCCCAGCGGTGTACCTTGAT
GGATCTGCTACGGCAATTACGAAGGGACTATCCGGAGGCACGCATCCTAGGACATTACCAATTAAGCCCTTACATACGCA
AGGCTTGCCCTTGCTTTGACGCAAGGGAGGAGTATCTCGTCTTATAA

Upstream 100 bases:

>100_bases
TGGAGTACCATTATCAAAGTGATCATCGCCGTAGCTACCGCCATCGCGGGAGCACTTGGCATCCAATAATGTATTCTCTA
ATTTTCAATTTTCAATTATC

Downstream 100 bases:

>100_bases
AATAGATACCGGCTCGTCATTCACTCGCTAGATTGTCCGGTTTCACGACTTACTTTGTAAAAATACCCCCTATCTCTTTC
AGCTCTTGCTCTTTATGATG

Product: putative N-acetylmuramoyl-L-alanine amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MGKAYCFYQNYREVRLLVIHCSATRYDRDFPVEALRSSHKARGFADIGYHFYITRDGELHRCRPVNQIGAHAAGWNDKSI
GICYEGGLDEQGRPADTRTYAQRCTLMDLLRQLRRDYPEARILGHYQLSPYIRKACPCFDAREEYLVL

Sequences:

>Translated_148_residues
MGKAYCFYQNYREVRLLVIHCSATRYDRDFPVEALRSSHKARGFADIGYHFYITRDGELHRCRPVNQIGAHAAGWNDKSI
GICYEGGLDEQGRPADTRTYAQRCTLMDLLRQLRRDYPEARILGHYQLSPYIRKACPCFDAREEYLVL
>Mature_147_residues
GKAYCFYQNYREVRLLVIHCSATRYDRDFPVEALRSSHKARGFADIGYHFYITRDGELHRCRPVNQIGAHAAGWNDKSIG
ICYEGGLDEQGRPADTRTYAQRCTLMDLLRQLRRDYPEARILGHYQLSPYIRKACPCFDAREEYLVL

Specific function: Unknown

COG id: COG3023

COG function: function code V; Negative regulator of beta-lactamase expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phage T3 and T7 N-acetylmuramoyl-L-alanine amidases [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002502
- InterPro:   IPR018247
- InterPro:   IPR015510 [H]

Pfam domain/function: PF01510 Amidase_2 [H]

EC number: NA

Molecular weight: Translated: 17272; Mature: 17141

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKAYCFYQNYREVRLLVIHCSATRYDRDFPVEALRSSHKARGFADIGYHFYITRDGELH
CCCEEEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEECCEEEEEECCCCCC
RCRPVNQIGAHAAGWNDKSIGICYEGGLDEQGRPADTRTYAQRCTLMDLLRQLRRDYPEA
CCCCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
RILGHYQLSPYIRKACPCFDAREEYLVL
EEEEEEECCHHHHHHCCCCCCCCCEECC
>Mature Secondary Structure 
GKAYCFYQNYREVRLLVIHCSATRYDRDFPVEALRSSHKARGFADIGYHFYITRDGELH
CCEEEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEECCEEEEEECCCCCC
RCRPVNQIGAHAAGWNDKSIGICYEGGLDEQGRPADTRTYAQRCTLMDLLRQLRRDYPEA
CCCCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
RILGHYQLSPYIRKACPCFDAREEYLVL
EEEEEEECCHHHHHHCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]