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The map label for this gene is ydiF [H]

Identifier: 150008162

GI number: 150008162

Start: 1790627

End: 1792246

Strand: Direct

Name: ydiF [H]

Synonym: BDI_1528

Alternate gene names: 150008162

Gene position: 1790627-1792246 (Clockwise)

Preceding gene: 150008161

Following gene: 150008163

Centisome position: 37.22

GC content: 51.91

Gene sequence:

>1620_bases
ATGAGTATCGTAGCGCAAAAAATCACGTATATACATCCGGACAATCAAGTCTTATTCAAGGGGATCGACTTGACGATCAA
CAAGGGGCAAAAGGTAGCCTTAGTCGGGAACAACGGATCGGGAAAATCCACCTTCCTCCGTATCTTGGCTGGAACCTTGC
AAGCGCAGGAAGGGGAGATTATCTATCCGACCCCACCCTATTACGTACCCCAGCATTTCGGGCAATATGATAACCTGACG
GTGGCCCAGGCCCTACGTATCGACGGGAAACTAGAAGCCTTGCGGGCGATTACCGAGGGCGACGCCTCCCTCTCTAATTT
CAATACGCTGGCGGATGACTGGACGATCGAGGAACGGAGCCTCGCCGCCCTGCACGCTTGGGGTTTGGAGCATATCCTCC
TCTCCCAACCGATGCGCACATTAAGTGGCGGCGAGAAAACCAAGGTTTTCCTCTCCGGAATCGAGATCCACCAACCCTCG
ATCCTGCTATTGGATGAGCCGACTAACCATCTGGATAGGCGCAGCCGGGAGAAGTTATACGATTTCATCACGTCTTGCCG
TATCACCTTGTTGGTCGTCAGCCACGATCGTACCTTATTGAACCTATTAGCTTCCATAGCGGAATTATCCGTCGGGGGGA
TCACCCTTTACGGGGGTAATTATGATTTCTACAAGGAACAAAAAGAACAGGAACAGGCTTCCATGCAAGAGAAACTGGAA
GCGAAGGAGAAAGAGCTTCGCAGGGTCAGGAAAACCGCCCGTGAGGTAGCCGAGCGAAAACAAAAGCATGAATCCCGGGG
AGAGAAGCAAAGCGTCCGGAAAGGAATCCCCCGGATCATGATGGGCGGATTGAAGGAGAACGCCGAGAAAAGCGCCTCCA
AACTAAAAGAGGTTCACGAGGACAAGATGGAGAACCTTGCCAACGAGCTAAAGCAAATGCTCTCCTCCCTACCCGACCTT
CAAGGCATGAAACTGGATTTCAGCGCATCCGGCTTACACGAAGGCAAGATATTGGTTACCGCCAAGGAGATCAATTTCGG
TTACGCCGAGGCCGGCGATCTATGGCCCTCCCCGATGAGCTTCCAGATCAAGAGTGGGGAACGGTGGCTGATACAAGGCG
ATAACGGTTCCGGCAAGACGACTTTGCTGAAGTTGATTACCGGCCAGTTACCGCCTCGTAGCGGTTCCTTGATCCGTGCG
GATTTCTCCTCTATCTATATCGACCAAGAATACTCGATCGTCCGGAACGGCCGGACGGTGTACGAGCAAGCGCAAGCCTT
CAACGAGCGTCATTTCCAAGAGCACGAGATCAAGACTTTGCTAAACCGTTTCCTCTTCCCGCACGACACGTGGGAGAAGA
GCTGCGGGAAGCTGAGCGGAGGCGAGAAAATGAGGTTGGCATTCTGTTGCTTGATGATCAGTAACCAGACTCCGGACCTA
TTTATCCTAGATGAGCCGACCAATAATCTCGACATCCAAAGCATCGAGATTATCACCTCCATGGTCCGTGCGTACAGGGG
CACGATCTTGCTGATCTCGCACGACGCTTATTTTATCCGGGAATTGGGTATCCACCAAATAATAACTACCTTCGCGGGTA
GGTTAAAGACGAATTTATGA

Upstream 100 bases:

>100_bases
GGCTGATTTCGTGACGACAGATTCGAGGCTATAGTGAAACCGATCATCATCGGTATTTCTTATCCATTTTAGTATCTCAC
ATTTTAAATCAGTTCACACT

Downstream 100 bases:

>100_bases
AGACGTTACTTGACGTGCATACCCATACGGTAGCCAGTGGGCATGCCTTTAGCACCCTGCAAGAAATGGCAGTGGCCGCC
TCCGAGAAAGGATTGAAGTT

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MSIVAQKITYIHPDNQVLFKGIDLTINKGQKVALVGNNGSGKSTFLRILAGTLQAQEGEIIYPTPPYYVPQHFGQYDNLT
VAQALRIDGKLEALRAITEGDASLSNFNTLADDWTIEERSLAALHAWGLEHILLSQPMRTLSGGEKTKVFLSGIEIHQPS
ILLLDEPTNHLDRRSREKLYDFITSCRITLLVVSHDRTLLNLLASIAELSVGGITLYGGNYDFYKEQKEQEQASMQEKLE
AKEKELRRVRKTAREVAERKQKHESRGEKQSVRKGIPRIMMGGLKENAEKSASKLKEVHEDKMENLANELKQMLSSLPDL
QGMKLDFSASGLHEGKILVTAKEINFGYAEAGDLWPSPMSFQIKSGERWLIQGDNGSGKTTLLKLITGQLPPRSGSLIRA
DFSSIYIDQEYSIVRNGRTVYEQAQAFNERHFQEHEIKTLLNRFLFPHDTWEKSCGKLSGGEKMRLAFCCLMISNQTPDL
FILDEPTNNLDIQSIEIITSMVRAYRGTILLISHDAYFIRELGIHQIITTFAGRLKTNL

Sequences:

>Translated_539_residues
MSIVAQKITYIHPDNQVLFKGIDLTINKGQKVALVGNNGSGKSTFLRILAGTLQAQEGEIIYPTPPYYVPQHFGQYDNLT
VAQALRIDGKLEALRAITEGDASLSNFNTLADDWTIEERSLAALHAWGLEHILLSQPMRTLSGGEKTKVFLSGIEIHQPS
ILLLDEPTNHLDRRSREKLYDFITSCRITLLVVSHDRTLLNLLASIAELSVGGITLYGGNYDFYKEQKEQEQASMQEKLE
AKEKELRRVRKTAREVAERKQKHESRGEKQSVRKGIPRIMMGGLKENAEKSASKLKEVHEDKMENLANELKQMLSSLPDL
QGMKLDFSASGLHEGKILVTAKEINFGYAEAGDLWPSPMSFQIKSGERWLIQGDNGSGKTTLLKLITGQLPPRSGSLIRA
DFSSIYIDQEYSIVRNGRTVYEQAQAFNERHFQEHEIKTLLNRFLFPHDTWEKSCGKLSGGEKMRLAFCCLMISNQTPDL
FILDEPTNNLDIQSIEIITSMVRAYRGTILLISHDAYFIRELGIHQIITTFAGRLKTNL
>Mature_538_residues
SIVAQKITYIHPDNQVLFKGIDLTINKGQKVALVGNNGSGKSTFLRILAGTLQAQEGEIIYPTPPYYVPQHFGQYDNLTV
AQALRIDGKLEALRAITEGDASLSNFNTLADDWTIEERSLAALHAWGLEHILLSQPMRTLSGGEKTKVFLSGIEIHQPSI
LLLDEPTNHLDRRSREKLYDFITSCRITLLVVSHDRTLLNLLASIAELSVGGITLYGGNYDFYKEQKEQEQASMQEKLEA
KEKELRRVRKTAREVAERKQKHESRGEKQSVRKGIPRIMMGGLKENAEKSASKLKEVHEDKMENLANELKQMLSSLPDLQ
GMKLDFSASGLHEGKILVTAKEINFGYAEAGDLWPSPMSFQIKSGERWLIQGDNGSGKTTLLKLITGQLPPRSGSLIRAD
FSSIYIDQEYSIVRNGRTVYEQAQAFNERHFQEHEIKTLLNRFLFPHDTWEKSCGKLSGGEKMRLAFCCLMISNQTPDLF
ILDEPTNNLDIQSIEIITSMVRAYRGTILLISHDAYFIRELGIHQIITTFAGRLKTNL

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=539, Percent_Identity=27.8293135435993, Blast_Score=155, Evalue=1e-37,
Organism=Homo sapiens, GI10947135, Length=524, Percent_Identity=29.3893129770992, Blast_Score=133, Evalue=6e-31,
Organism=Homo sapiens, GI69354671, Length=524, Percent_Identity=29.3893129770992, Blast_Score=132, Evalue=6e-31,
Organism=Homo sapiens, GI27881506, Length=556, Percent_Identity=24.1007194244604, Blast_Score=119, Evalue=9e-27,
Organism=Homo sapiens, GI10947137, Length=556, Percent_Identity=24.1007194244604, Blast_Score=119, Evalue=9e-27,
Organism=Homo sapiens, GI27477115, Length=172, Percent_Identity=27.3255813953488, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI6005701, Length=177, Percent_Identity=25.9887005649718, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI153792144, Length=188, Percent_Identity=29.7872340425532, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1787041, Length=532, Percent_Identity=29.3233082706767, Blast_Score=182, Evalue=5e-47,
Organism=Escherichia coli, GI2367384, Length=547, Percent_Identity=27.9707495429616, Blast_Score=165, Evalue=8e-42,
Organism=Escherichia coli, GI1787182, Length=556, Percent_Identity=28.5971223021583, Blast_Score=162, Evalue=7e-41,
Organism=Escherichia coli, GI1789751, Length=521, Percent_Identity=26.679462571977, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI87081782, Length=515, Percent_Identity=25.2427184466019, Blast_Score=99, Evalue=8e-22,
Organism=Escherichia coli, GI87081791, Length=230, Percent_Identity=27.3913043478261, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1786703, Length=201, Percent_Identity=31.3432835820896, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787164, Length=189, Percent_Identity=34.3915343915344, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1790467, Length=224, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI87081834, Length=213, Percent_Identity=25.8215962441315, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI1788165, Length=183, Percent_Identity=31.1475409836066, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1787112, Length=217, Percent_Identity=27.6497695852535, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786698, Length=190, Percent_Identity=30.5263157894737, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788506, Length=204, Percent_Identity=27.4509803921569, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786654, Length=206, Percent_Identity=28.6407766990291, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=528, Percent_Identity=28.219696969697, Blast_Score=160, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17555318, Length=530, Percent_Identity=25.4716981132075, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17553372, Length=561, Percent_Identity=27.2727272727273, Blast_Score=128, Evalue=7e-30,
Organism=Caenorhabditis elegans, GI17542146, Length=263, Percent_Identity=26.9961977186312, Blast_Score=76, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6320874, Length=532, Percent_Identity=25.187969924812, Blast_Score=135, Evalue=1e-32,
Organism=Saccharomyces cerevisiae, GI6321121, Length=545, Percent_Identity=24.954128440367, Blast_Score=126, Evalue=1e-29,
Organism=Saccharomyces cerevisiae, GI6325030, Length=226, Percent_Identity=30.5309734513274, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6324314, Length=187, Percent_Identity=30.4812834224599, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6323278, Length=249, Percent_Identity=27.710843373494, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24641342, Length=540, Percent_Identity=28.1481481481481, Blast_Score=160, Evalue=3e-39,
Organism=Drosophila melanogaster, GI24666836, Length=541, Percent_Identity=27.3567467652495, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24642252, Length=528, Percent_Identity=25.5681818181818, Blast_Score=134, Evalue=2e-31,
Organism=Drosophila melanogaster, GI18859989, Length=528, Percent_Identity=25.5681818181818, Blast_Score=134, Evalue=2e-31,
Organism=Drosophila melanogaster, GI85725262, Length=196, Percent_Identity=27.0408163265306, Blast_Score=69, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 60764; Mature: 60633

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIVAQKITYIHPDNQVLFKGIDLTINKGQKVALVGNNGSGKSTFLRILAGTLQAQEGEI
CCCHHCCEEEECCCCCEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCE
IYPTPPYYVPQHFGQYDNLTVAQALRIDGKLEALRAITEGDASLSNFNTLADDWTIEERS
ECCCCCCCCCHHCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCHHHCCCCCCCCEECHHH
LAALHAWGLEHILLSQPMRTLSGGEKTKVFLSGIEIHQPSILLLDEPTNHLDRRSREKLY
HHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHH
DFITSCRITLLVVSHDRTLLNLLASIAELSVGGITLYGGNYDFYKEQKEQEQASMQEKLE
HHHHCCEEEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH
AKEKELRRVRKTAREVAERKQKHESRGEKQSVRKGIPRIMMGGLKENAEKSASKLKEVHE
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHH
DKMENLANELKQMLSSLPDLQGMKLDFSASGLHEGKILVTAKEINFGYAEAGDLWPSPMS
HHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCE
FQIKSGERWLIQGDNGSGKTTLLKLITGQLPPRSGSLIRADFSSIYIDQEYSIVRNGRTV
EEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEECCCEEEECCCHHHHHCCHHH
YEQAQAFNERHFQEHEIKTLLNRFLFPHDTWEKSCGKLSGGEKMRLAFCCLMISNQTPDL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHEEHHHCCCCCCE
FILDEPTNNLDIQSIEIITSMVRAYRGTILLISHDAYFIRELGIHQIITTFAGRLKTNL
EEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIVAQKITYIHPDNQVLFKGIDLTINKGQKVALVGNNGSGKSTFLRILAGTLQAQEGEI
CCHHCCEEEECCCCCEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCE
IYPTPPYYVPQHFGQYDNLTVAQALRIDGKLEALRAITEGDASLSNFNTLADDWTIEERS
ECCCCCCCCCHHCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCHHHCCCCCCCCEECHHH
LAALHAWGLEHILLSQPMRTLSGGEKTKVFLSGIEIHQPSILLLDEPTNHLDRRSREKLY
HHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHH
DFITSCRITLLVVSHDRTLLNLLASIAELSVGGITLYGGNYDFYKEQKEQEQASMQEKLE
HHHHCCEEEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH
AKEKELRRVRKTAREVAERKQKHESRGEKQSVRKGIPRIMMGGLKENAEKSASKLKEVHE
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHH
DKMENLANELKQMLSSLPDLQGMKLDFSASGLHEGKILVTAKEINFGYAEAGDLWPSPMS
HHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCE
FQIKSGERWLIQGDNGSGKTTLLKLITGQLPPRSGSLIRADFSSIYIDQEYSIVRNGRTV
EEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEECCCEEEECCCHHHHHCCHHH
YEQAQAFNERHFQEHEIKTLLNRFLFPHDTWEKSCGKLSGGEKMRLAFCCLMISNQTPDL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHEEHHHCCCCCCE
FILDEPTNNLDIQSIEIITSMVRAYRGTILLISHDAYFIRELGIHQIITTFAGRLKTNL
EEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]