| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is 150008112
Identifier: 150008112
GI number: 150008112
Start: 1722197
End: 1724395
Strand: Direct
Name: 150008112
Synonym: BDI_1476
Alternate gene names: NA
Gene position: 1722197-1724395 (Clockwise)
Preceding gene: 150008110
Following gene: 150008113
Centisome position: 35.79
GC content: 43.88
Gene sequence:
>2199_bases ATGACAATACAAGAAATAAATAAAGCATACAACCGAATTATCGGTTCATTAGACGAAAAGGAGCTAAAGAATGCGTTCGA TTTTCTCCAAGGTTTAATAGCGGGAATACGTGAGTACTCATTCCAAGACAGGTTGAACGAGCTACAAGATACTTATAAAT ATATGTTGCGATACCGGATCGAGGGGGCTAAAGATCCGATGCAAGACCAGATATACAACAACTTGATCGCATCCAGCTAT GAGTTCGCGGATATAGTGAAGCACAAGGCCTTATCGGTAGATTCGCCTCTCTCCTATTATAGCCGTAGGCGAATGATGCA AAAGGAGCTTACCAACTATGACCAGCTCCACAAGGTCTTGAGAAACGCCTCTCTGGTGAAGATAGAGACTCCGACCGGAA CCATCACGGAGCAGCAGCAAATCGAATCCGCCACGATCCTATTATTCAATAAGATCTGGACCTCGAATCCTCTCAATAAG GAAGAAATAGCCTCCATCAGGAACCTATTGAATGACCAAGAGTTGCCTTTTATCATCGGTAGCCAAATCGTATCGGCATT AATGTTGGGATTGCAAGCCGCTTTCGATAAGGAGAAACTGCTATTATTATTCGATGCGGCCAATATCCAAGAAGACGAGA TTCGTTACCGCGCGTTGATCGGGATTCTCCTGACGCTCTATACCTATAGGAAACGTACGGCGCTATATCCGCAGATAGCG GATCGACTAGCGGCTTTATCCGAGGGATTTCCTAATTTCACGAAAGCGATCCGAACGATTACCCTTCGTTTTATCCTAGC CCGTGAGACAGAGAAGATCACCCGTAAGCTACAAGACGAGATCATTCCGGAGATGATCAAGCTAGGCCCTAAAATCAGTC AAAAGATAAACTTAAAGGATATCAATCCGGAACTTCTCGGAAACGAGATGAATCCGGAGTGGCAGAATATGTTATCGAAC AGCTCCTTAGGGAAGAAAATGGAGGAGTTCAGCGAACTGCAACAAGAAGGCGCGGACGTAATGCACTCTACTTTCGTGCA CCTAAAGCATTTCCCCTTTTTCCGGGAACTGGGTAACTGGTTCATGCCATTCACGACCGAGCATTCCGCTTTTGGCAATC AGTTGAGCAAGAATCAAACGGAAAAGGACATGCTAGATTCCATGACTCTTGCGGCATTCATGTGTAATTCCGATAAATAC TCCTTATATTTCAGTATGATGCAATTGCCGGACCAAGCCCGTCAAATGATGATGGGACAATTTGGTAGCCAAGCCTCCGA GATGATTCAGCAAACGAAGGAGGAATTGATCAGTAAACGGGGAAAACTGGAAATCATATCCGGACAGTACATACAGGACT TGTATCGTTTCTTCAAACTTTATCCGGGACATCTGGATTTTGATGACATATTTACATCTGCGCTAGACTTTCATAACCTG CCAATTTTGCAGCCTTACGTCAGTGATGAGGAAAGTTTGACAACTATAGCGGAGTATTATCTCCGGAAGAATTACTTCCT CGATGCGCTCACGATCTACAATCGCTTATCCGATGCAAATCAAGAAAGTGATATCTTATTCCAGAAAATCGGTTACTGCA AACAAATGAATGGCGATATACAAGGCGCCTTGGAGGCTTATTTACATGCGGATCTTATCAATCCGGACAGTAAATGGGTT ATTCGCCGGATCGCCGGTTGTTACCGTACCTTAAAGCAACCGGAAGAAGCGTTGAAATACTATCATCGTTACGAGGCTTT CAATCCGGATGATTTATCGATCCAAATATGTATCGGCCACTGCCATCTTGAACTCAAGAATTATAATGAGGCGCTGAAAT ATTATTTCAAGGTAGATTATCTGGACAATAAAAGCACGAAGGCTTGGCGTCCGATCGCTTGGTGTTCTTTCTTGACCGGT AAATACGATCAGGCCCGTAATTATTACAAAAAGATCATGGATAATCAACCCAACACCCAAGATTTCTTGAATGCGGGACA TACGGAATGGGCATTACAGAATATAAAGGGAGCGCTTGCTTTTTATAAAAAAGCCGTGGAGAAAGAGTCCGGTGATTTCT CGAAGTTCCAAGAGCAGTTCAATCAAGATATCCCCGATCTTCTTGTAGCGGGAATCGAGGAGGCGGAAGTGCCGTTGATG ATGGATCAACTCCGGTATTCCTTGAGCGATATATTCTAA
Upstream 100 bases:
>100_bases CGGATATTCTTCATCTGCCAAATTTATTTTTAGGTACGCGAAGATAGGAAATTTAGCCTAAATACTATACTTTTGGCATA CCATTTGTTGTTAATAGTAT
Downstream 100 bases:
>100_bases CTAGTCATCCAACAATTTGAGAAGACAAGAAAAAATATCGTATGAAAGAGATGATACTAAAGACAAAGCGACTCCTATTA AGGGAATTAAAACAAGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; TPR Domain Protein; O-Linked Glcnac Transferase; Tetratricopeptide Repeat Containing Protein
Number of amino acids: Translated: 732; Mature: 731
Protein sequence:
>732_residues MTIQEINKAYNRIIGSLDEKELKNAFDFLQGLIAGIREYSFQDRLNELQDTYKYMLRYRIEGAKDPMQDQIYNNLIASSY EFADIVKHKALSVDSPLSYYSRRRMMQKELTNYDQLHKVLRNASLVKIETPTGTITEQQQIESATILLFNKIWTSNPLNK EEIASIRNLLNDQELPFIIGSQIVSALMLGLQAAFDKEKLLLLFDAANIQEDEIRYRALIGILLTLYTYRKRTALYPQIA DRLAALSEGFPNFTKAIRTITLRFILARETEKITRKLQDEIIPEMIKLGPKISQKINLKDINPELLGNEMNPEWQNMLSN SSLGKKMEEFSELQQEGADVMHSTFVHLKHFPFFRELGNWFMPFTTEHSAFGNQLSKNQTEKDMLDSMTLAAFMCNSDKY SLYFSMMQLPDQARQMMMGQFGSQASEMIQQTKEELISKRGKLEIISGQYIQDLYRFFKLYPGHLDFDDIFTSALDFHNL PILQPYVSDEESLTTIAEYYLRKNYFLDALTIYNRLSDANQESDILFQKIGYCKQMNGDIQGALEAYLHADLINPDSKWV IRRIAGCYRTLKQPEEALKYYHRYEAFNPDDLSIQICIGHCHLELKNYNEALKYYFKVDYLDNKSTKAWRPIAWCSFLTG KYDQARNYYKKIMDNQPNTQDFLNAGHTEWALQNIKGALAFYKKAVEKESGDFSKFQEQFNQDIPDLLVAGIEEAEVPLM MDQLRYSLSDIF
Sequences:
>Translated_732_residues MTIQEINKAYNRIIGSLDEKELKNAFDFLQGLIAGIREYSFQDRLNELQDTYKYMLRYRIEGAKDPMQDQIYNNLIASSY EFADIVKHKALSVDSPLSYYSRRRMMQKELTNYDQLHKVLRNASLVKIETPTGTITEQQQIESATILLFNKIWTSNPLNK EEIASIRNLLNDQELPFIIGSQIVSALMLGLQAAFDKEKLLLLFDAANIQEDEIRYRALIGILLTLYTYRKRTALYPQIA DRLAALSEGFPNFTKAIRTITLRFILARETEKITRKLQDEIIPEMIKLGPKISQKINLKDINPELLGNEMNPEWQNMLSN SSLGKKMEEFSELQQEGADVMHSTFVHLKHFPFFRELGNWFMPFTTEHSAFGNQLSKNQTEKDMLDSMTLAAFMCNSDKY SLYFSMMQLPDQARQMMMGQFGSQASEMIQQTKEELISKRGKLEIISGQYIQDLYRFFKLYPGHLDFDDIFTSALDFHNL PILQPYVSDEESLTTIAEYYLRKNYFLDALTIYNRLSDANQESDILFQKIGYCKQMNGDIQGALEAYLHADLINPDSKWV IRRIAGCYRTLKQPEEALKYYHRYEAFNPDDLSIQICIGHCHLELKNYNEALKYYFKVDYLDNKSTKAWRPIAWCSFLTG KYDQARNYYKKIMDNQPNTQDFLNAGHTEWALQNIKGALAFYKKAVEKESGDFSKFQEQFNQDIPDLLVAGIEEAEVPLM MDQLRYSLSDIF >Mature_731_residues TIQEINKAYNRIIGSLDEKELKNAFDFLQGLIAGIREYSFQDRLNELQDTYKYMLRYRIEGAKDPMQDQIYNNLIASSYE FADIVKHKALSVDSPLSYYSRRRMMQKELTNYDQLHKVLRNASLVKIETPTGTITEQQQIESATILLFNKIWTSNPLNKE EIASIRNLLNDQELPFIIGSQIVSALMLGLQAAFDKEKLLLLFDAANIQEDEIRYRALIGILLTLYTYRKRTALYPQIAD RLAALSEGFPNFTKAIRTITLRFILARETEKITRKLQDEIIPEMIKLGPKISQKINLKDINPELLGNEMNPEWQNMLSNS SLGKKMEEFSELQQEGADVMHSTFVHLKHFPFFRELGNWFMPFTTEHSAFGNQLSKNQTEKDMLDSMTLAAFMCNSDKYS LYFSMMQLPDQARQMMMGQFGSQASEMIQQTKEELISKRGKLEIISGQYIQDLYRFFKLYPGHLDFDDIFTSALDFHNLP ILQPYVSDEESLTTIAEYYLRKNYFLDALTIYNRLSDANQESDILFQKIGYCKQMNGDIQGALEAYLHADLINPDSKWVI RRIAGCYRTLKQPEEALKYYHRYEAFNPDDLSIQICIGHCHLELKNYNEALKYYFKVDYLDNKSTKAWRPIAWCSFLTGK YDQARNYYKKIMDNQPNTQDFLNAGHTEWALQNIKGALAFYKKAVEKESGDFSKFQEQFNQDIPDLLVAGIEEAEVPLMM DQLRYSLSDIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85281; Mature: 85149
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIQEINKAYNRIIGSLDEKELKNAFDFLQGLIAGIREYSFQDRLNELQDTYKYMLRYRI CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGAKDPMQDQIYNNLIASSYEFADIVKHKALSVDSPLSYYSRRRMMQKELTNYDQLHKVL CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH RNASLVKIETPTGTITEQQQIESATILLFNKIWTSNPLNKEEIASIRNLLNDQELPFIIG CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHH SQIVSALMLGLQAAFDKEKLLLLFDAANIQEDEIRYRALIGILLTLYTYRKRTALYPQIA HHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRLAALSEGFPNFTKAIRTITLRFILARETEKITRKLQDEIIPEMIKLGPKISQKINLKD HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCC INPELLGNEMNPEWQNMLSNSSLGKKMEEFSELQQEGADVMHSTFVHLKHFPFFRELGNW CCHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCC FMPFTTEHSAFGNQLSKNQTEKDMLDSMTLAAFMCNSDKYSLYFSMMQLPDQARQMMMGQ CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHH FGSQASEMIQQTKEELISKRGKLEIISGQYIQDLYRFFKLYPGHLDFDDIFTSALDFHNL HCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC PILQPYVSDEESLTTIAEYYLRKNYFLDALTIYNRLSDANQESDILFQKIGYCKQMNGDI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHH QGALEAYLHADLINPDSKWVIRRIAGCYRTLKQPEEALKYYHRYEAFNPDDLSIQICIGH HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEEEEE CHLELKNYNEALKYYFKVDYLDNKSTKAWRPIAWCSFLTGKYDQARNYYKKIMDNQPNTQ EEEEHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHH DFLNAGHTEWALQNIKGALAFYKKAVEKESGDFSKFQEQFNQDIPDLLVAGIEEAEVPLM HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCCCHHH MDQLRYSLSDIF HHHHHHHHHHCC >Mature Secondary Structure TIQEINKAYNRIIGSLDEKELKNAFDFLQGLIAGIREYSFQDRLNELQDTYKYMLRYRI CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGAKDPMQDQIYNNLIASSYEFADIVKHKALSVDSPLSYYSRRRMMQKELTNYDQLHKVL CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH RNASLVKIETPTGTITEQQQIESATILLFNKIWTSNPLNKEEIASIRNLLNDQELPFIIG CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHH SQIVSALMLGLQAAFDKEKLLLLFDAANIQEDEIRYRALIGILLTLYTYRKRTALYPQIA HHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRLAALSEGFPNFTKAIRTITLRFILARETEKITRKLQDEIIPEMIKLGPKISQKINLKD HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCC INPELLGNEMNPEWQNMLSNSSLGKKMEEFSELQQEGADVMHSTFVHLKHFPFFRELGNW CCHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCC FMPFTTEHSAFGNQLSKNQTEKDMLDSMTLAAFMCNSDKYSLYFSMMQLPDQARQMMMGQ CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHH FGSQASEMIQQTKEELISKRGKLEIISGQYIQDLYRFFKLYPGHLDFDDIFTSALDFHNL HCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC PILQPYVSDEESLTTIAEYYLRKNYFLDALTIYNRLSDANQESDILFQKIGYCKQMNGDI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHH QGALEAYLHADLINPDSKWVIRRIAGCYRTLKQPEEALKYYHRYEAFNPDDLSIQICIGH HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEEEEE CHLELKNYNEALKYYFKVDYLDNKSTKAWRPIAWCSFLTGKYDQARNYYKKIMDNQPNTQ EEEEHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHH DFLNAGHTEWALQNIKGALAFYKKAVEKESGDFSKFQEQFNQDIPDLLVAGIEEAEVPLM HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCCCHHH MDQLRYSLSDIF HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA