| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008104
Identifier: 150008104
GI number: 150008104
Start: 1712318
End: 1713574
Strand: Direct
Name: 150008104
Synonym: BDI_1468
Alternate gene names: NA
Gene position: 1712318-1713574 (Clockwise)
Preceding gene: 150008102
Following gene: 150008105
Centisome position: 35.59
GC content: 35.64
Gene sequence:
>1257_bases ATGATACAGTCTTTGATTAATAAACATTTTTTCAATCTGCTTCTTTTCACCTTGACTTTTGGTATATTGTTATACGATGC CATCGGGTTTGATTATACAGATGAAATTTGCGCCTTATTCCTATTCGTTTTATTCGGTATATATCTGTTTTCCACATCCG ACTGGAACTTCAACAAGGGCTTTTTAACAACCATTGGTATTTTCCTGTTCTATTTTTGCTACTCCCTATACATTGGAAGT AATACGAAAACAGCGATAATATCAGATATGTTAATCCAGATCAAGCCTTATCTCGCTTTTTTCTGCGTATACTCAATGAT GCCAAGATTTAGCGAATCCCAGAAAAATATCATGAAATCAATATGCCTTGTATTTTGGTTTCTCTTGCTTCTGATGGGAC TAGGAAAAGCTGTAGAGCCTAGGATTTTATTCCATCTCATGGGACATCCGGCTTATTATGCGGCAGCCGTTGTATGCGTT TCCCTTTGTTATTTGTATTGCAGTAAGTTCACTAATCTGGATAAGATTACATTTGTTGCTTTATTGTCTATTGGACTAAT ATCTGGTAGATCTAAATTCTATGGATTTTTCGCTCTAGCCACATTTATCACGTTCTACTTCTCAAATATAAAGCAGTTCA AGTTAGACGCAAAGAATATTACGATCATATTACTAACTATTGTCGCAGTATTATTTGTCGCTAGAGAGAAGATCTATTTC TATTTCTATCAGACATTAACCAGCGAGGTAGACAAAGACATGATCGCCCGGTATGTATTATATGCGACCGCCCCACAGAT ATTAATAGATTACTTTCCTTTCGGTAGCGGGTTCGCCAGCTTTGGGACTTTCTCCTCAGGAGTGTATTATTCGAGTATCT ATTCAAAATATGGAATAGATGGAGTATGGGGTATGAGTAAGGACCATTACAACTTTATAGCGGATACCTACTACCCTTCT TTAGCTCAATTTGGCATTGTAGGGATTATCTTATACATCACTTTTTGGATCTATATCCTTATGAAGGCAATTAAATTCCA TAAAAGGACATATAATATGAAATGCTTATCGATGGTATTGATGATCATTGGTTTCTTTATCATTGAGGGCACTACCGACT CAACATTTACAACGCATAGAGGCTTTTTTGTCCTTATGCTATTAGGTTTAATATTATCAGATTTGAAGAACGGGGTGACA GATGAAGTTCATCCAAATGCAAAAGAGTTACAAGATGAAAATACTTCAGATAAATAA
Upstream 100 bases:
>100_bases GCAAAAAGGATGATGAAACATAGTTTATTCCAAGAATAACCCATAACTTTGTTTCATAATATAAATATGTACAAGTTACT CAACGTACTCTTATAAAAGT
Downstream 100 bases:
>100_bases ATACTTTTTCAAAAAAGGAGGTGCGGAAACTGTCTTTTTCAACACGATTCAGCTCCTCGAGAGACATGGGCACACAGTTA TCCCATTCAGTCTTAAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MIQSLINKHFFNLLLFTLTFGILLYDAIGFDYTDEICALFLFVLFGIYLFSTSDWNFNKGFLTTIGIFLFYFCYSLYIGS NTKTAIISDMLIQIKPYLAFFCVYSMMPRFSESQKNIMKSICLVFWFLLLLMGLGKAVEPRILFHLMGHPAYYAAAVVCV SLCYLYCSKFTNLDKITFVALLSIGLISGRSKFYGFFALATFITFYFSNIKQFKLDAKNITIILLTIVAVLFVAREKIYF YFYQTLTSEVDKDMIARYVLYATAPQILIDYFPFGSGFASFGTFSSGVYYSSIYSKYGIDGVWGMSKDHYNFIADTYYPS LAQFGIVGIILYITFWIYILMKAIKFHKRTYNMKCLSMVLMIIGFFIIEGTTDSTFTTHRGFFVLMLLGLILSDLKNGVT DEVHPNAKELQDENTSDK
Sequences:
>Translated_418_residues MIQSLINKHFFNLLLFTLTFGILLYDAIGFDYTDEICALFLFVLFGIYLFSTSDWNFNKGFLTTIGIFLFYFCYSLYIGS NTKTAIISDMLIQIKPYLAFFCVYSMMPRFSESQKNIMKSICLVFWFLLLLMGLGKAVEPRILFHLMGHPAYYAAAVVCV SLCYLYCSKFTNLDKITFVALLSIGLISGRSKFYGFFALATFITFYFSNIKQFKLDAKNITIILLTIVAVLFVAREKIYF YFYQTLTSEVDKDMIARYVLYATAPQILIDYFPFGSGFASFGTFSSGVYYSSIYSKYGIDGVWGMSKDHYNFIADTYYPS LAQFGIVGIILYITFWIYILMKAIKFHKRTYNMKCLSMVLMIIGFFIIEGTTDSTFTTHRGFFVLMLLGLILSDLKNGVT DEVHPNAKELQDENTSDK >Mature_418_residues MIQSLINKHFFNLLLFTLTFGILLYDAIGFDYTDEICALFLFVLFGIYLFSTSDWNFNKGFLTTIGIFLFYFCYSLYIGS NTKTAIISDMLIQIKPYLAFFCVYSMMPRFSESQKNIMKSICLVFWFLLLLMGLGKAVEPRILFHLMGHPAYYAAAVVCV SLCYLYCSKFTNLDKITFVALLSIGLISGRSKFYGFFALATFITFYFSNIKQFKLDAKNITIILLTIVAVLFVAREKIYF YFYQTLTSEVDKDMIARYVLYATAPQILIDYFPFGSGFASFGTFSSGVYYSSIYSKYGIDGVWGMSKDHYNFIADTYYPS LAQFGIVGIILYITFWIYILMKAIKFHKRTYNMKCLSMVLMIIGFFIIEGTTDSTFTTHRGFFVLMLLGLILSDLKNGVT DEVHPNAKELQDENTSDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48034; Mature: 48034
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQSLINKHFFNLLLFTLTFGILLYDAIGFDYTDEICALFLFVLFGIYLFSTSDWNFNKG CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCH FLTTIGIFLFYFCYSLYIGSNTKTAIISDMLIQIKPYLAFFCVYSMMPRFSESQKNIMKS HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH ICLVFWFLLLLMGLGKAVEPRILFHLMGHPAYYAAAVVCVSLCYLYCSKFTNLDKITFVA HHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LLSIGLISGRSKFYGFFALATFITFYFSNIKQFKLDAKNITIILLTIVAVLFVAREKIYF HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHH YFYQTLTSEVDKDMIARYVLYATAPQILIDYFPFGSGFASFGTFSSGVYYSSIYSKYGID HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHCCC GVWGMSKDHYNFIADTYYPSLAQFGIVGIILYITFWIYILMKAIKFHKRTYNMKCLSMVL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH MIIGFFIIEGTTDSTFTTHRGFFVLMLLGLILSDLKNGVTDEVHPNAKELQDENTSDK HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCC >Mature Secondary Structure MIQSLINKHFFNLLLFTLTFGILLYDAIGFDYTDEICALFLFVLFGIYLFSTSDWNFNKG CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCH FLTTIGIFLFYFCYSLYIGSNTKTAIISDMLIQIKPYLAFFCVYSMMPRFSESQKNIMKS HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH ICLVFWFLLLLMGLGKAVEPRILFHLMGHPAYYAAAVVCVSLCYLYCSKFTNLDKITFVA HHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LLSIGLISGRSKFYGFFALATFITFYFSNIKQFKLDAKNITIILLTIVAVLFVAREKIYF HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHH YFYQTLTSEVDKDMIARYVLYATAPQILIDYFPFGSGFASFGTFSSGVYYSSIYSKYGID HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHCCC GVWGMSKDHYNFIADTYYPSLAQFGIVGIILYITFWIYILMKAIKFHKRTYNMKCLSMVL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH MIIGFFIIEGTTDSTFTTHRGFFVLMLLGLILSDLKNGVTDEVHPNAKELQDENTSDK HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA