| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008086
Identifier: 150008086
GI number: 150008086
Start: 1689950
End: 1691143
Strand: Direct
Name: 150008086
Synonym: BDI_1450
Alternate gene names: NA
Gene position: 1689950-1691143 (Clockwise)
Preceding gene: 150008083
Following gene: 150008087
Centisome position: 35.12
GC content: 45.48
Gene sequence:
>1194_bases ATGGGAAGAGTATTAGTTATTGGTGCAGGGGGCGTAAGTACCGTTGCTGTTAAGAAAATAGCGATGAATGCGGATGTCTT CACGGATATCATGGTAGCTAGCCGTACGAAAAGTAAATGCGACAAGATCGCCGCCGATATCAAGAACGTAAAAGTGCAAA CCGCACAGGTAGACGCAGATAACGTGCAAGAGCTTGTTGCCTTGTTTAACGCCTTCAAACCGGATTTGGTGGTAAATCTG GCCTTACCTTATCAAGACTTGCATATCATGGATGCTTGTCTGGAATACGGCGTTAGCTATTTAGATACGGCCAACTACGA ACCGCTTGATGAAGCCAAATATCAATACAGCTGGCAATGGGCCTATAAAGATCGTTTCGAGAAAGCCGGTCTTACCGCTA TCTTGGGATGTGGTTTCGATCCGGGGGTTACCGGCGTATATACAGCCTATGCGGCAAAGCATCATTTCGACGAGATACAC TATCTGGATATCGTAGACTGCAACGCAGGAGATCACCATAAGGCATTCGCTACCAATTTCAATCCGGAAATCAATATCCG TGAGATTACTCAACGTGGCAAATATTTCGAGGATGGGGAATGGAAGGAGACCGATCCGTTAAGCGTACATAAAGCCTTGA ATTATCCGAATGTAGGACCGAAAGAATCGTATTTGATGTATCACGAGGAATTGGAAAGTTTGACCAAAAACTTCCCGACC CTCAAACGGGCTCGTTTCTGGATGACTTTCGGACAGGAATACTTGACTCATCTACGTGTCATCCAAAATATCGGTATGGC TCGTATCGACCCGATCCTTTACAACGGGCAGGAAATCGTTCCGATCCAATTCTTAAAAGCCGTATTGCCGAACCCGGGTG ATCTGGGAGAGAATTATACTGGCGAGACTTCCATCGGTTGCCGCATCCGTGGTATCAAGGACGGTAAGGAATTAACTTAT TACGTATACAACAACTGTAGCCACCATGCCGCTTATCTAGAGACAGGAGCGCAAGGTGTTAGTTATACCACCGGTGTTCC CGCCATGATCGGCGCCAAATTATTTATGCAAGGCATTTGGAAGAAACCGGGAGTATGGAATGTAGAGGAATTCAATCCGG ACCCATTCATGAAAGAGCTAAATGAGCAAGGTTTGCCTTGGCATGAATTGTTTAACATTGACTTAGAATTGTAA
Upstream 100 bases:
>100_bases AATAAATCTTTTATAGGGATTGTCAAGGAAAAGCCGTATATTTGTCCATTGGTTGAAAACCTTGTAAACTGTATATTAAC AAGATTAATTCTATTAGTAA
Downstream 100 bases:
>100_bases TATGGCAGTACAAATAGGCGATAAGGTTCCCGAGTTTTTGGGAACCGATCAAGACGGTAAAGAGGTAAAGATGAGTGACT ATAAAGGGAAAAAAGTAGCG
Product: saccharopine dehydrogenase
Products: NA
Alternate protein names: Carboxynorspermidine Dehydrogenase; Saccharopine Dehydrogenase-Like Protein; Saccharopine Dehydrogenase Family Protein; L-Lysine Dehydrogenase; Acyl Carrier Protein; Carboxynorspermide Hydratase
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MGRVLVIGAGGVSTVAVKKIAMNADVFTDIMVASRTKSKCDKIAADIKNVKVQTAQVDADNVQELVALFNAFKPDLVVNL ALPYQDLHIMDACLEYGVSYLDTANYEPLDEAKYQYSWQWAYKDRFEKAGLTAILGCGFDPGVTGVYTAYAAKHHFDEIH YLDIVDCNAGDHHKAFATNFNPEINIREITQRGKYFEDGEWKETDPLSVHKALNYPNVGPKESYLMYHEELESLTKNFPT LKRARFWMTFGQEYLTHLRVIQNIGMARIDPILYNGQEIVPIQFLKAVLPNPGDLGENYTGETSIGCRIRGIKDGKELTY YVYNNCSHHAAYLETGAQGVSYTTGVPAMIGAKLFMQGIWKKPGVWNVEEFNPDPFMKELNEQGLPWHELFNIDLEL
Sequences:
>Translated_397_residues MGRVLVIGAGGVSTVAVKKIAMNADVFTDIMVASRTKSKCDKIAADIKNVKVQTAQVDADNVQELVALFNAFKPDLVVNL ALPYQDLHIMDACLEYGVSYLDTANYEPLDEAKYQYSWQWAYKDRFEKAGLTAILGCGFDPGVTGVYTAYAAKHHFDEIH YLDIVDCNAGDHHKAFATNFNPEINIREITQRGKYFEDGEWKETDPLSVHKALNYPNVGPKESYLMYHEELESLTKNFPT LKRARFWMTFGQEYLTHLRVIQNIGMARIDPILYNGQEIVPIQFLKAVLPNPGDLGENYTGETSIGCRIRGIKDGKELTY YVYNNCSHHAAYLETGAQGVSYTTGVPAMIGAKLFMQGIWKKPGVWNVEEFNPDPFMKELNEQGLPWHELFNIDLEL >Mature_396_residues GRVLVIGAGGVSTVAVKKIAMNADVFTDIMVASRTKSKCDKIAADIKNVKVQTAQVDADNVQELVALFNAFKPDLVVNLA LPYQDLHIMDACLEYGVSYLDTANYEPLDEAKYQYSWQWAYKDRFEKAGLTAILGCGFDPGVTGVYTAYAAKHHFDEIHY LDIVDCNAGDHHKAFATNFNPEINIREITQRGKYFEDGEWKETDPLSVHKALNYPNVGPKESYLMYHEELESLTKNFPTL KRARFWMTFGQEYLTHLRVIQNIGMARIDPILYNGQEIVPIQFLKAVLPNPGDLGENYTGETSIGCRIRGIKDGKELTYY VYNNCSHHAAYLETGAQGVSYTTGVPAMIGAKLFMQGIWKKPGVWNVEEFNPDPFMKELNEQGLPWHELFNIDLEL
Specific function: Unknown
COG id: COG1748
COG function: function code E; Saccharopine dehydrogenase and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44819; Mature: 44688
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRVLVIGAGGVSTVAVKKIAMNADVFTDIMVASRTKSKCDKIAADIKNVKVQTAQVDAD CCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCEEEEEECCHH NVQELVALFNAFKPDLVVNLALPYQDLHIMDACLEYGVSYLDTANYEPLDEAKYQYSWQW HHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEEE AYKDRFEKAGLTAILGCGFDPGVTGVYTAYAAKHHFDEIHYLDIVDCNAGDHHKAFATNF HHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEECCC NPEINIREITQRGKYFEDGEWKETDPLSVHKALNYPNVGPKESYLMYHEELESLTKNFPT CCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCH LKRARFWMTFGQEYLTHLRVIQNIGMARIDPILYNGQEIVPIQFLKAVLPNPGDLGENYT HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEECCCEEEHHHHHHHHCCCCCCCCCCCC GETSIGCRIRGIKDGKELTYYVYNNCSHHAAYLETGAQGVSYTTGVPAMIGAKLFMQGIW CCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHC KKPGVWNVEEFNPDPFMKELNEQGLPWHELFNIDLEL CCCCCCCHHCCCCCHHHHHHHHCCCCHHHEEEEEECC >Mature Secondary Structure GRVLVIGAGGVSTVAVKKIAMNADVFTDIMVASRTKSKCDKIAADIKNVKVQTAQVDAD CCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCEEEEEECCHH NVQELVALFNAFKPDLVVNLALPYQDLHIMDACLEYGVSYLDTANYEPLDEAKYQYSWQW HHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEEE AYKDRFEKAGLTAILGCGFDPGVTGVYTAYAAKHHFDEIHYLDIVDCNAGDHHKAFATNF HHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEECCC NPEINIREITQRGKYFEDGEWKETDPLSVHKALNYPNVGPKESYLMYHEELESLTKNFPT CCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCH LKRARFWMTFGQEYLTHLRVIQNIGMARIDPILYNGQEIVPIQFLKAVLPNPGDLGENYT HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEECCCEEEHHHHHHHHCCCCCCCCCCCC GETSIGCRIRGIKDGKELTYYVYNNCSHHAAYLETGAQGVSYTTGVPAMIGAKLFMQGIW CCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHC KKPGVWNVEEFNPDPFMKELNEQGLPWHELFNIDLEL CCCCCCCHHCCCCCHHHHHHHHCCCCHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA