| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is bchE [H]
Identifier: 150008078
GI number: 150008078
Start: 1675619
End: 1677499
Strand: Direct
Name: bchE [H]
Synonym: BDI_1442
Alternate gene names: 150008078
Gene position: 1675619-1677499 (Clockwise)
Preceding gene: 150008077
Following gene: 150008081
Centisome position: 34.83
GC content: 53.59
Gene sequence:
>1881_bases ATGGGATTAGCTTCGGTTCTTCTGGTTTTATCTCCGTTTACGCAGATCAATACGCCTTATCCTTCCACGGCTTACCTAAA AGGTTATTTGGAGGCAAAGGGTGTACATGCCGGGCAGACCGATCTGGGTATCGAGACAATCTTGGCTTTGTTTTCCACGC AGGGTCTCGGGGAGTTATTCGCCGAGATCGAGCGACGGAAAGGTAAATATCCGGCTAAAGTCCGGGGGATGCTAGCTAAT AAGCAACGGTATATCGACACGATAGCCGCCGTCGTCGCTTTCCTTCAGGGAAAGAACGATCCTCTCGCTTATCGCATCTG TAACCAAGATTACCTTCCCGAAAGCGACTGCGGGAGCCAAAACGAGGAGGAGCTGGAATGGGCGTTCGGCACTTCGGGAT TACGGGATAAGGCCCGTTATCTGGCGACCTTGTATCTGGAGGATCTCTGCGACTTGATCAGGGAAACGATCGACCCGGAT TTCGGCTTCAGTCGATATGCCGAGCATCTGGGCCGCTGCGCCTCCTCTTTCGACGAGATCGAGGAAGCCCTCCAAAAACC TTTCGGCTTTATCGACCGCCTGACGCAACCGCTATTGGAAAAGCACATCGCCAAGAGCAAGCCCAAGGCGATCGCTTTCA GCGTACCTTTCCCGGGGAATTTATTCAGTACCCTCCGGCTCGCCCAATGGCTACGGCAGGCACATCCCGATATCCCGATC CTTATGGGAGGTGGTTTCGTGAATACGGAACTTCGCTCCATCACGGATACACGCTTCTTCAAATACATCGATTACCTCTT GCTAGATGATGGAGAGGACCCACTCTTCCAAGTGTTACGCTATCTGGACGGGGCGATCCAAAAAGAGGAACTGGTACGCA CCTTCTCCTTGGACGAGAACGGTAGCCGGGTCGTTTATCAAGATAATCCCGCTTACCCCGCTTGCCGGCAAAGCGAGACC GGATTCCCGGATTACGAGGGCTTGCCGCTGGACAAATACATCTCCGTCATGGAAATGGCCAACCCGATGCACAAGCTTTG GAGCGATGGTCGCTGGAATAAACTGACCTTGGCGCACGGTTGCTACTGGGGGAAATGCGCCTTCTGCGACGGCTCATTGG ATTACATCAAACGATATGAGCCGAATACAGCCAAGACTTTGGTAGACCGTATGGAGCGCTTGATCGAGCAAACCGGCGAG ATCGGCTTCCATTTCGTGGACGAGGCCGCTCCACCCGCCTTGCTACGGGAAATGGCGCAGGAGATTATCCGCCGTGGGAT AACCGTCGTGTGGTGGGGAAATATTCGTTTTGAGAAAAGCTATACTGAGGAACTATGCGACCTTCTTCAACGAAGTGGCT GCATCGCCGTGTCGGGAGGTCTGGAAGTAGCCTCTCCCCGACTCCTCAAGCTGATAAATAAAGGGGTGACAGTGGCTCAA GTGGCACGGGTCGCCAACAACTTTACCGGGGCAGGCATCATGGTCCATGCCTATTTGATGTATGGTTTCCCGACCCAAAC CGCTCAAGAAACCATAGATTCCTTAGAAACGGTCCGGCAAATGTTTGAGCTTGGGCTGATTCAATCCGGATTTTGGCATC GTTTCGCCATGACAGCGCATAGCCCTGTGGGGTTGCACCCCGCCGAGTACAGTTGCCGTGTCACGGAGCCTCCCTTTGGC GGATTCGCCCGTAATGACGTACAGTTCGAGGCGCTATCCGGCTGCGATCCGGAGCTTTTCAGCGAGGGGCTTCGCGTTTC CCTCTACAATTACATGAATGGAACAGGCTTCGACTTGCCCTTGCATAAATGGTTCGGCGGCATGAAAGTACCACGCACCA CCCTGCCGCCGAATTATATAGAGAGGATAGTGGAGGAATAG
Upstream 100 bases:
>100_bases TCCTCTCTTCCTCGGAGAAGAAAGAGGGACGGGATGAGATTCTGGACTATATCGAGTCTATCAACAATAGCTTGAATAAT TGAAAATTAGTTGAGTTGAT
Downstream 100 bases:
>100_bases CCCCGTAGAGGCTCGCCGGAGGATTGGAAACGGGTTGGAACTCCGCGGCGATCTCCGCCGGGCATCTTGAGTTCCCTTCC GATCCTCCGGCGACCCCCGC
Product: Fe-S oxidoreductase
Products: NA
Alternate protein names: Anaerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase [H]
Number of amino acids: Translated: 626; Mature: 625
Protein sequence:
>626_residues MGLASVLLVLSPFTQINTPYPSTAYLKGYLEAKGVHAGQTDLGIETILALFSTQGLGELFAEIERRKGKYPAKVRGMLAN KQRYIDTIAAVVAFLQGKNDPLAYRICNQDYLPESDCGSQNEEELEWAFGTSGLRDKARYLATLYLEDLCDLIRETIDPD FGFSRYAEHLGRCASSFDEIEEALQKPFGFIDRLTQPLLEKHIAKSKPKAIAFSVPFPGNLFSTLRLAQWLRQAHPDIPI LMGGGFVNTELRSITDTRFFKYIDYLLLDDGEDPLFQVLRYLDGAIQKEELVRTFSLDENGSRVVYQDNPAYPACRQSET GFPDYEGLPLDKYISVMEMANPMHKLWSDGRWNKLTLAHGCYWGKCAFCDGSLDYIKRYEPNTAKTLVDRMERLIEQTGE IGFHFVDEAAPPALLREMAQEIIRRGITVVWWGNIRFEKSYTEELCDLLQRSGCIAVSGGLEVASPRLLKLINKGVTVAQ VARVANNFTGAGIMVHAYLMYGFPTQTAQETIDSLETVRQMFELGLIQSGFWHRFAMTAHSPVGLHPAEYSCRVTEPPFG GFARNDVQFEALSGCDPELFSEGLRVSLYNYMNGTGFDLPLHKWFGGMKVPRTTLPPNYIERIVEE
Sequences:
>Translated_626_residues MGLASVLLVLSPFTQINTPYPSTAYLKGYLEAKGVHAGQTDLGIETILALFSTQGLGELFAEIERRKGKYPAKVRGMLAN KQRYIDTIAAVVAFLQGKNDPLAYRICNQDYLPESDCGSQNEEELEWAFGTSGLRDKARYLATLYLEDLCDLIRETIDPD FGFSRYAEHLGRCASSFDEIEEALQKPFGFIDRLTQPLLEKHIAKSKPKAIAFSVPFPGNLFSTLRLAQWLRQAHPDIPI LMGGGFVNTELRSITDTRFFKYIDYLLLDDGEDPLFQVLRYLDGAIQKEELVRTFSLDENGSRVVYQDNPAYPACRQSET GFPDYEGLPLDKYISVMEMANPMHKLWSDGRWNKLTLAHGCYWGKCAFCDGSLDYIKRYEPNTAKTLVDRMERLIEQTGE IGFHFVDEAAPPALLREMAQEIIRRGITVVWWGNIRFEKSYTEELCDLLQRSGCIAVSGGLEVASPRLLKLINKGVTVAQ VARVANNFTGAGIMVHAYLMYGFPTQTAQETIDSLETVRQMFELGLIQSGFWHRFAMTAHSPVGLHPAEYSCRVTEPPFG GFARNDVQFEALSGCDPELFSEGLRVSLYNYMNGTGFDLPLHKWFGGMKVPRTTLPPNYIERIVEE >Mature_625_residues GLASVLLVLSPFTQINTPYPSTAYLKGYLEAKGVHAGQTDLGIETILALFSTQGLGELFAEIERRKGKYPAKVRGMLANK QRYIDTIAAVVAFLQGKNDPLAYRICNQDYLPESDCGSQNEEELEWAFGTSGLRDKARYLATLYLEDLCDLIRETIDPDF GFSRYAEHLGRCASSFDEIEEALQKPFGFIDRLTQPLLEKHIAKSKPKAIAFSVPFPGNLFSTLRLAQWLRQAHPDIPIL MGGGFVNTELRSITDTRFFKYIDYLLLDDGEDPLFQVLRYLDGAIQKEELVRTFSLDENGSRVVYQDNPAYPACRQSETG FPDYEGLPLDKYISVMEMANPMHKLWSDGRWNKLTLAHGCYWGKCAFCDGSLDYIKRYEPNTAKTLVDRMERLIEQTGEI GFHFVDEAAPPALLREMAQEIIRRGITVVWWGNIRFEKSYTEELCDLLQRSGCIAVSGGLEVASPRLLKLINKGVTVAQV ARVANNFTGAGIMVHAYLMYGFPTQTAQETIDSLETVRQMFELGLIQSGFWHRFAMTAHSPVGLHPAEYSCRVTEPPFGG FARNDVQFEALSGCDPELFSEGLRVSLYNYMNGTGFDLPLHKWFGGMKVPRTTLPPNYIERIVEE
Specific function: Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis in anaerobic conditions. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-prot
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011772 - InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 70577; Mature: 70446
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLASVLLVLSPFTQINTPYPSTAYLKGYLEAKGVHAGQTDLGIETILALFSTQGLGELF CCHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHH AEIERRKGKYPAKVRGMLANKQRYIDTIAAVVAFLQGKNDPLAYRICNQDYLPESDCGSQ HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC NEEELEWAFGTSGLRDKARYLATLYLEDLCDLIRETIDPDFGFSRYAEHLGRCASSFDEI CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EEALQKPFGFIDRLTQPLLEKHIAKSKPKAIAFSVPFPGNLFSTLRLAQWLRQAHPDIPI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEE LMGGGFVNTELRSITDTRFFKYIDYLLLDDGEDPLFQVLRYLDGAIQKEELVRTFSLDEN EECCCEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC GSRVVYQDNPAYPACRQSETGFPDYEGLPLDKYISVMEMANPMHKLWSDGRWNKLTLAHG CCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC CYWGKCAFCDGSLDYIKRYEPNTAKTLVDRMERLIEQTGEIGFHFVDEAAPPALLREMAQ CEECEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHH EIIRRGITVVWWGNIRFEKSYTEELCDLLQRSGCIAVSGGLEVASPRLLKLINKGVTVAQ HHHHCCCEEEEECCEEECHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCCHHHH VARVANNFTGAGIMVHAYLMYGFPTQTAQETIDSLETVRQMFELGLIQSGFWHRFAMTAH HHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC SPVGLHPAEYSCRVTEPPFGGFARNDVQFEALSGCDPELFSEGLRVSLYNYMNGTGFDLP CCCCCCCCCCEEEECCCCCCCCCCCCCCEEHHCCCCHHHHHCCCEEEEEHHCCCCCCCCC LHKWFGGMKVPRTTLPPNYIERIVEE HHHHHCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure GLASVLLVLSPFTQINTPYPSTAYLKGYLEAKGVHAGQTDLGIETILALFSTQGLGELF CHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHH AEIERRKGKYPAKVRGMLANKQRYIDTIAAVVAFLQGKNDPLAYRICNQDYLPESDCGSQ HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC NEEELEWAFGTSGLRDKARYLATLYLEDLCDLIRETIDPDFGFSRYAEHLGRCASSFDEI CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EEALQKPFGFIDRLTQPLLEKHIAKSKPKAIAFSVPFPGNLFSTLRLAQWLRQAHPDIPI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEE LMGGGFVNTELRSITDTRFFKYIDYLLLDDGEDPLFQVLRYLDGAIQKEELVRTFSLDEN EECCCEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC GSRVVYQDNPAYPACRQSETGFPDYEGLPLDKYISVMEMANPMHKLWSDGRWNKLTLAHG CCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC CYWGKCAFCDGSLDYIKRYEPNTAKTLVDRMERLIEQTGEIGFHFVDEAAPPALLREMAQ CEECEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHH EIIRRGITVVWWGNIRFEKSYTEELCDLLQRSGCIAVSGGLEVASPRLLKLINKGVTVAQ HHHHCCCEEEEECCEEECHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCCHHHH VARVANNFTGAGIMVHAYLMYGFPTQTAQETIDSLETVRQMFELGLIQSGFWHRFAMTAH HHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC SPVGLHPAEYSCRVTEPPFGGFARNDVQFEALSGCDPELFSEGLRVSLYNYMNGTGFDLP CCCCCCCCCCEEEECCCCCCCCCCCCCCEEHHCCCCHHHHHCCCEEEEEHHCCCCCCCCC LHKWFGGMKVPRTTLPPNYIERIVEE HHHHHCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA