| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008027
Identifier: 150008027
GI number: 150008027
Start: 1613891
End: 1614808
Strand: Direct
Name: 150008027
Synonym: BDI_1390
Alternate gene names: NA
Gene position: 1613891-1614808 (Clockwise)
Preceding gene: 150008026
Following gene: 150008028
Centisome position: 33.54
GC content: 46.95
Gene sequence:
>918_bases ATGCCTAACAAACGAAATCTCAAGGACTACGGTTTTTTAGTATTAAAAGGTATGGGTATGGGAGCGGCGGATGTCGTTCC CGGTGTGTCGGGAGGAACGATCGCCTTTATCGTAGGTATCTACGAGGAACTGATCGACTCTATCAAAAGTATTAACGGGA CGACATTGAAACAATTATTCACGGGGAAAATAGCGGCCTTCTGGAAAGGGATCAACGCTAATTTCTTGCTTTCTATCGTG GCCGGTATCGGTATCAGCATATTCTCGCTGGCGAAGATCATTACGTATCTCTTGGTGTATCACCCGATCTTGGTATGGTC TTTTTTCTTTGGCTTGGTGCTGGCCTCTACTTGGTTCGTCTCTAAGGATATCAAGCAATGGAACTGGAAGACGATCTTGA GTTTCGTTGTCGGGGCGATGATCGCTTTTTATATCACCGTGGCGACTCCCGCCGAGACTCCGAGTAATTTACTCTTTATC TTCCTCTGTGGGGCGATCGCTATTTGCGCCATGATCTTGCCGGGTATCTCGGGTAGCTTTATCTTAGTGTTGCTCGGAAA ATACTTCTATATCATGGAGGCGGTCAAGACGTTTAACGTTCCCGTTATGTTGGTGTTTATAGGGGGTGCGGCTATTGGTA TCACGACGTTCTCCCGCGTGTTGTCATTCGCCCTTCGTAAATTCCATGATATAACGATCGCCGTATTGGCCGGATTCATG TTGGGTTCGCTTAACAAGGTATGGCCTTGGAAAGAAACGATCGAGACCTATGTGGATAGCCATGGCATGACCAAGCCGTT GGTTGAGGCGAATATCGCTCCGAATCAGTTTGTTTGGGAGGCCGTCGGATTGATGATCTTAGGTTTCGGGATCGTATATT TCCTAGAAAAGCTCTCACAAAAAAGCGCTAAGGCGTAA
Upstream 100 bases:
>100_bases TCGATCCCGATAAAGAGAAGAAACATATCCAACCCGAGGATCTGGTAAAAGAGTTTTTAAAGAATAAAGATAACAGTAAT TAGACAATTAATAATGTAAT
Downstream 100 bases:
>100_bases CCCAATATTACAATGGGCATTATAAGGAGATTACAATGCCCATTATAAGATGGTAAGAATGGGCATTGTAAAGAGCTTAC GATGCCCATTCTTATTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Domain Protein; Inner Membrane Protein; Conserved Membrane Protein
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MPNKRNLKDYGFLVLKGMGMGAADVVPGVSGGTIAFIVGIYEELIDSIKSINGTTLKQLFTGKIAAFWKGINANFLLSIV AGIGISIFSLAKIITYLLVYHPILVWSFFFGLVLASTWFVSKDIKQWNWKTILSFVVGAMIAFYITVATPAETPSNLLFI FLCGAIAICAMILPGISGSFILVLLGKYFYIMEAVKTFNVPVMLVFIGGAAIGITTFSRVLSFALRKFHDITIAVLAGFM LGSLNKVWPWKETIETYVDSHGMTKPLVEANIAPNQFVWEAVGLMILGFGIVYFLEKLSQKSAKA
Sequences:
>Translated_305_residues MPNKRNLKDYGFLVLKGMGMGAADVVPGVSGGTIAFIVGIYEELIDSIKSINGTTLKQLFTGKIAAFWKGINANFLLSIV AGIGISIFSLAKIITYLLVYHPILVWSFFFGLVLASTWFVSKDIKQWNWKTILSFVVGAMIAFYITVATPAETPSNLLFI FLCGAIAICAMILPGISGSFILVLLGKYFYIMEAVKTFNVPVMLVFIGGAAIGITTFSRVLSFALRKFHDITIAVLAGFM LGSLNKVWPWKETIETYVDSHGMTKPLVEANIAPNQFVWEAVGLMILGFGIVYFLEKLSQKSAKA >Mature_304_residues PNKRNLKDYGFLVLKGMGMGAADVVPGVSGGTIAFIVGIYEELIDSIKSINGTTLKQLFTGKIAAFWKGINANFLLSIVA GIGISIFSLAKIITYLLVYHPILVWSFFFGLVLASTWFVSKDIKQWNWKTILSFVVGAMIAFYITVATPAETPSNLLFIF LCGAIAICAMILPGISGSFILVLLGKYFYIMEAVKTFNVPVMLVFIGGAAIGITTFSRVLSFALRKFHDITIAVLAGFML GSLNKVWPWKETIETYVDSHGMTKPLVEANIAPNQFVWEAVGLMILGFGIVYFLEKLSQKSAKA
Specific function: Unknown
COG id: COG2035
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33371; Mature: 33240
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNKRNLKDYGFLVLKGMGMGAADVVPGVSGGTIAFIVGIYEELIDSIKSINGTTLKQLF CCCCCCCHHHCEEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH TGKIAAFWKGINANFLLSIVAGIGISIFSLAKIITYLLVYHPILVWSFFFGLVLASTWFV HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKDIKQWNWKTILSFVVGAMIAFYITVATPAETPSNLLFIFLCGAIAICAMILPGISGSF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH ILVLLGKYFYIMEAVKTFNVPVMLVFIGGAAIGITTFSRVLSFALRKFHDITIAVLAGFM HHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGSLNKVWPWKETIETYVDSHGMTKPLVEANIAPNQFVWEAVGLMILGFGIVYFLEKLSQ HHCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KSAKA HCCCC >Mature Secondary Structure PNKRNLKDYGFLVLKGMGMGAADVVPGVSGGTIAFIVGIYEELIDSIKSINGTTLKQLF CCCCCCHHHCEEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH TGKIAAFWKGINANFLLSIVAGIGISIFSLAKIITYLLVYHPILVWSFFFGLVLASTWFV HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKDIKQWNWKTILSFVVGAMIAFYITVATPAETPSNLLFIFLCGAIAICAMILPGISGSF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH ILVLLGKYFYIMEAVKTFNVPVMLVFIGGAAIGITTFSRVLSFALRKFHDITIAVLAGFM HHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGSLNKVWPWKETIETYVDSHGMTKPLVEANIAPNQFVWEAVGLMILGFGIVYFLEKLSQ HHCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KSAKA HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA