| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is putP1 [H]
Identifier: 150008005
GI number: 150008005
Start: 1586501
End: 1588054
Strand: Direct
Name: putP1 [H]
Synonym: BDI_1368
Alternate gene names: 150008005
Gene position: 1586501-1588054 (Clockwise)
Preceding gene: 150008004
Following gene: 150008006
Centisome position: 32.97
GC content: 48.58
Gene sequence:
>1554_bases ATGAGTACGCTAACATTAGGCATTATTGTCATTATTTACATGTTTGTAATCGCTTGGTTAGGGTATCTCGGATACAGGCA GACGAAAAACGCCAGTGATTATTTATTAGGCGGACGAAAAGTAAACCCCATTATCATGGCCCTGTCTTACGGGGCGACCT TTATCTCGGCATCGGCGATCGTTGGTTTCGGTGGCGTAGCCGCTACGTTCGGCATGGGTATTCAATGGCTTTGCTTATTG AACATGTTCATGGGCGTAGTGGTAGCCTTTATCTTTTTCGGACGAAGGACCCGGAAGTTAGGCGAGGCACATAACGCACG GACTTTCCCGCAATTATTGGGATTACACTATAAGTCCCGGTCTATACAGATCTTCATCGCCTCGATCATTTTCATCGGCA TGCCCCTCTACACCGCCGTGGTGATGAAGGGAGGAGCCGTCTTCATCGAACAGATGTTTCACATCGACCTTCATCTGGCC TTGTTGATCTTCACCTTGATCGTAGCGGCCTACGTGATTACGGGCGGAATCAAGGGAGTACTTTATACGGATGCGTTGCA AGCGGTTATCATGTTCGCTTGTATGCTATTCCTGCTATTTTGGTTTTACCATATCATGGACATGGGCTTTATCGAGGCAA ACCAGAAGTTGACGGATATCGCCCCCATGGTGCCCGAACGCTTCAAGGCCTTGGGACATCAAGGATGGACAGCTATGCCC ATCTCAGGCTCTTCACAATGGTATACATTGGTTACCTCATTGATCCTTGGCGTAGGAATCGGTTGCTTAGCGCAGCCACA ACTAGTCGTACGCTTCATGATGGTGGAAAGTACCAAGCAACTCAACAGGGGCGTATTGATCGGTTGCGTGTTCTTGATTG TCACGGTAGGGGCGATTTATCACGTGGGAGCCTTGTCTAATTTGTTTTTCCTCAAGACGGAAGGTGTAGTCGCCTCCGAG GCGGTAAAAGATATGGACAAGATCATCCCCCTATTTATCAATAAAGCGATGCCGGAGTGGTTCGGGGCGGTTTTCATGCT TTGTATTCTCTCTGCCAGTATGTCTACCCTTAGCGCACAATTTCATACCATGGGAGCGGCTTTCGGGGCAGACGCATTCC CCAAACTAGGACGTAGCAAAAATCCGAACTCTACATTAGGTGTACGTATCGGCGTGCTATGCTCTATCTTGGTCAGCTAC GTTATCTGCTATACGCTAAGCGCGAGTATTATCGCACGAGGCACCGCCTTGTTCATGGGTATTTGCGCGGCTACATTCCT ACCTACCTATTTCTGCTCGTTATATTGGAAAGGGGCTACCCGGCAAGGGGCCTTGGCCAGCTTATGGGTAGGAGGCTTGG CCAGTTTATTCGCCATGTTGTTCCTTCATAAGGCGGAAGCGGCTCCGGTAGGACTTTGCAAGGCTTTATTCGGACAAGAC GTCTTGATCGATGTATATCCGTGGCATGCGATAGATCCGATCTTATTTGCTTTGCCATTATCGGCGATAACGATTGTTTT GGTTAGCCTAGCGACTCAAAAGAAGGCTTTTTAG
Upstream 100 bases:
>100_bases TTCTAGCGTTCGCCTGCCTCCTATTTTCTATTTGGTTCGGGATAACCACTTGGAATAAAGAAGACGACGAAAAAACAAAC CCTACTAAAGAATCACGAAA
Downstream 100 bases:
>100_bases CTTTTCTTATGAACCTCAAAACACTAATTAGCATTTATTCTATTGACAGATATATAGAAAACAGTACATTTGCACTGTGG TTTTTTCATAATAGTATTAG
Product: osmo-regulated proline transporter
Products: Na (I) [Cytoplasm]; pantothenate [Cytoplasm] [C]
Alternate protein names: Proline permease 1 [H]
Number of amino acids: Translated: 517; Mature: 516
Protein sequence:
>517_residues MSTLTLGIIVIIYMFVIAWLGYLGYRQTKNASDYLLGGRKVNPIIMALSYGATFISASAIVGFGGVAATFGMGIQWLCLL NMFMGVVVAFIFFGRRTRKLGEAHNARTFPQLLGLHYKSRSIQIFIASIIFIGMPLYTAVVMKGGAVFIEQMFHIDLHLA LLIFTLIVAAYVITGGIKGVLYTDALQAVIMFACMLFLLFWFYHIMDMGFIEANQKLTDIAPMVPERFKALGHQGWTAMP ISGSSQWYTLVTSLILGVGIGCLAQPQLVVRFMMVESTKQLNRGVLIGCVFLIVTVGAIYHVGALSNLFFLKTEGVVASE AVKDMDKIIPLFINKAMPEWFGAVFMLCILSASMSTLSAQFHTMGAAFGADAFPKLGRSKNPNSTLGVRIGVLCSILVSY VICYTLSASIIARGTALFMGICAATFLPTYFCSLYWKGATRQGALASLWVGGLASLFAMLFLHKAEAAPVGLCKALFGQD VLIDVYPWHAIDPILFALPLSAITIVLVSLATQKKAF
Sequences:
>Translated_517_residues MSTLTLGIIVIIYMFVIAWLGYLGYRQTKNASDYLLGGRKVNPIIMALSYGATFISASAIVGFGGVAATFGMGIQWLCLL NMFMGVVVAFIFFGRRTRKLGEAHNARTFPQLLGLHYKSRSIQIFIASIIFIGMPLYTAVVMKGGAVFIEQMFHIDLHLA LLIFTLIVAAYVITGGIKGVLYTDALQAVIMFACMLFLLFWFYHIMDMGFIEANQKLTDIAPMVPERFKALGHQGWTAMP ISGSSQWYTLVTSLILGVGIGCLAQPQLVVRFMMVESTKQLNRGVLIGCVFLIVTVGAIYHVGALSNLFFLKTEGVVASE AVKDMDKIIPLFINKAMPEWFGAVFMLCILSASMSTLSAQFHTMGAAFGADAFPKLGRSKNPNSTLGVRIGVLCSILVSY VICYTLSASIIARGTALFMGICAATFLPTYFCSLYWKGATRQGALASLWVGGLASLFAMLFLHKAEAAPVGLCKALFGQD VLIDVYPWHAIDPILFALPLSAITIVLVSLATQKKAF >Mature_516_residues STLTLGIIVIIYMFVIAWLGYLGYRQTKNASDYLLGGRKVNPIIMALSYGATFISASAIVGFGGVAATFGMGIQWLCLLN MFMGVVVAFIFFGRRTRKLGEAHNARTFPQLLGLHYKSRSIQIFIASIIFIGMPLYTAVVMKGGAVFIEQMFHIDLHLAL LIFTLIVAAYVITGGIKGVLYTDALQAVIMFACMLFLLFWFYHIMDMGFIEANQKLTDIAPMVPERFKALGHQGWTAMPI SGSSQWYTLVTSLILGVGIGCLAQPQLVVRFMMVESTKQLNRGVLIGCVFLIVTVGAIYHVGALSNLFFLKTEGVVASEA VKDMDKIIPLFINKAMPEWFGAVFMLCILSASMSTLSAQFHTMGAAFGADAFPKLGRSKNPNSTLGVRIGVLCSILVSYV ICYTLSASIIARGTALFMGICAATFLPTYFCSLYWKGATRQGALASLWVGGLASLFAMLFLHKAEAAPVGLCKALFGQDV LIDVYPWHAIDPILFALPLSAITIVLVSLATQKKAF
Specific function: Catalyzes the sodium-dependent uptake of extracellular L-proline [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=517, Percent_Identity=27.4661508704062, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI4507035, Length=368, Percent_Identity=23.0978260869565, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI206597483, Length=436, Percent_Identity=24.5412844036697, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI206597487, Length=436, Percent_Identity=24.5412844036697, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI14140236, Length=491, Percent_Identity=23.4215885947047, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI17941285, Length=197, Percent_Identity=29.4416243654822, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI87082237, Length=435, Percent_Identity=26.4367816091954, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1787251, Length=448, Percent_Identity=25.2232142857143, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1790503, Length=482, Percent_Identity=21.5767634854772, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115533094, Length=357, Percent_Identity=27.1708683473389, Blast_Score=75, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011851 - InterPro: IPR001734 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 56280; Mature: 56149
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLTLGIIVIIYMFVIAWLGYLGYRQTKNASDYLLGGRKVNPIIMALSYGATFISASAI CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEEEHHCHHHHHHHHH VGFGGVAATFGMGIQWLCLLNMFMGVVVAFIFFGRRTRKLGEAHNARTFPQLLGLHYKSR HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC SIQIFIASIIFIGMPLYTAVVMKGGAVFIEQMFHIDLHLALLIFTLIVAAYVITGGIKGV HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LYTDALQAVIMFACMLFLLFWFYHIMDMGFIEANQKLTDIAPMVPERFKALGHQGWTAMP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHCCHHHHHHHCCCCCEEEC ISGSSQWYTLVTSLILGVGIGCLAQPQLVVRFMMVESTKQLNRGVLIGCVFLIVTVGAIY CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH HVGALSNLFFLKTEGVVASEAVKDMDKIIPLFINKAMPEWFGAVFMLCILSASMSTLSAQ HHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH FHTMGAAFGADAFPKLGRSKNPNSTLGVRIGVLCSILVSYVICYTLSASIIARGTALFMG HHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ICAATFLPTYFCSLYWKGATRQGALASLWVGGLASLFAMLFLHKAEAAPVGLCKALFGQD HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC VLIDVYPWHAIDPILFALPLSAITIVLVSLATQKKAF EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STLTLGIIVIIYMFVIAWLGYLGYRQTKNASDYLLGGRKVNPIIMALSYGATFISASAI CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEEEHHCHHHHHHHHH VGFGGVAATFGMGIQWLCLLNMFMGVVVAFIFFGRRTRKLGEAHNARTFPQLLGLHYKSR HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC SIQIFIASIIFIGMPLYTAVVMKGGAVFIEQMFHIDLHLALLIFTLIVAAYVITGGIKGV HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LYTDALQAVIMFACMLFLLFWFYHIMDMGFIEANQKLTDIAPMVPERFKALGHQGWTAMP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHCCHHHHHHHCCCCCEEEC ISGSSQWYTLVTSLILGVGIGCLAQPQLVVRFMMVESTKQLNRGVLIGCVFLIVTVGAIY CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH HVGALSNLFFLKTEGVVASEAVKDMDKIIPLFINKAMPEWFGAVFMLCILSASMSTLSAQ HHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH FHTMGAAFGADAFPKLGRSKNPNSTLGVRIGVLCSILVSYVICYTLSASIIARGTALFMG HHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ICAATFLPTYFCSLYWKGATRQGALASLWVGGLASLFAMLFLHKAEAAPVGLCKALFGQD HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC VLIDVYPWHAIDPILFALPLSAITIVLVSLATQKKAF EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Na (I) [Periplasm]; pantothenate [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + pantothenate [Periplasm] = Na (I) [Cytoplasm] + pantothenate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA