Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is 150007983

Identifier: 150007983

GI number: 150007983

Start: 1564365

End: 1565822

Strand: Reverse

Name: 150007983

Synonym: BDI_1345

Alternate gene names: NA

Gene position: 1565822-1564365 (Counterclockwise)

Preceding gene: 150007984

Following gene: 150007982

Centisome position: 32.54

GC content: 43.76

Gene sequence:

>1458_bases
ATGAACATCTATTTCATCAATCCCCCTTTCAAAGCCGAATTCGGGAAGTTCTCCAGAGAATCCCGTAGTCCGGCAATTAC
GAAAAGTGGGGCTTTATATTATCCTCTATGGCTGATTTATGCGGCTTTGTATTCAAGCAAACAGGGACATAATGTCTCTT
TTTTGGATGCTCCAGCTAAACAGTTAAATGAGGAACAGTCTTTAAACATTATTCGGAAGACGGATAATGAGCATTCATTG
TTTGTTTTAGATACAAGTACGCCTTCCATTAAAAGTGACGTTGCTTTTGCCGGGAAGCTGAAGGCATTGTATCCTCACTC
GTTTGTCGTGCTTGTGGGGACTCATCCTTCGGCTTGCGCAGAAGAGACGTTGGGTTATTCGAATGCGGTGGATGCGGTCG
CTATTGGGGAATATGATTGTATCGTGAATGAGCTAGCGAATGTTCTGGACGCAGGAAAGGATCTGCGGGAGGTTCGAGGG
CTTTGTTTTTGGGACGGGAAGGAGTTTGTACGAACCGCGCCTATGCCACCGATGAAGAATTTGGATGATCTTCCTTTCGC
TTCTCAATTTATCAAGGAACATTTAAATGAGAGGGATTACTTTTTCGCTGCTGCCACATATCCCTCTATCCAGATATTTA
CCGGGCGTGGATGTCCCTTCCGTTGTAATTTCTGTGTCTACCCGCAAACGATGCATGGGCATGCTTTTCGGGCACGATCC
GCAGAGAATGTGGTGGCCGAGTTCGAATACATTGCCGCTAATTTCCCAGATGTGAAGGAGGTAGTAATCGAGGATGATAC
ATTTACAGCCAATAAGAAGCGAGTATTGGACATTTGTCGTTTGTTAGTGGAAAAGAAATTGAATAAACGGCTGAAATGGT
TATGTAATGCTCGTGTGGACCTTGATTTGGAAACGATGTTGGCTATGAAAAAGGCCGGATGTCGTTTGATTATTCCGGGT
ATAGAGAGTGGTAGCCAACAGATATTGGATAACATCAAGAAAGGAACGAAGGTGGAATATTTCTATCAGTATGTTGCCAA
CGCTAAAAAGGCGGGCTTGTTAATACATGCTTGTTATATGGTCGGTAACCAAGGCGAAACCCGGGAAACCATGGAAGAGA
CTCTTCGGTTAGCGTTAAGGTTGAATACGGATACCGCCCAGTTTTTCCCGTTGATACCTTATCCCGGTACGGAGGCTTAT
CAGTGGGCGAGGGAAAATAACTATATAGAGACGGATTATGAGAAGTATTGTTTGCCGGATGGTACACATAACACCGTATT
GTCTTTACCGGATCTTTCCGCAGGGGAAATGGTTGATTTCTGTAATAGGGCACGGAAGAAATATTATTTACGTGCCAGTT
ACATTTTACACAGGCTGAGAGTCGGTTTGCGTAATCCTTCAGACTTGAAACGTTCGCTTAAGGCATTCGCTAAGTTGAAA
CGTTATTTATTTAAATAA

Upstream 100 bases:

>100_bases
TCATTCTTCCCTTTTTACTATTTACTGATTATGCTTTATGTTCTGTCATTCAGAACAGCGATATATATGTTTAACAAACT
AAGAACCCGATAGATTTATT

Downstream 100 bases:

>100_bases
TCATTTGTATTTAACGTGTTGCCTCTTGTATCCATTATAACCCCGTGTTATAATGCGGCTCCTTTTATATCCCAAGCGAT
TGAGTCCGTATTGGCTCAAT

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MNIYFINPPFKAEFGKFSRESRSPAITKSGALYYPLWLIYAALYSSKQGHNVSFLDAPAKQLNEEQSLNIIRKTDNEHSL
FVLDTSTPSIKSDVAFAGKLKALYPHSFVVLVGTHPSACAEETLGYSNAVDAVAIGEYDCIVNELANVLDAGKDLREVRG
LCFWDGKEFVRTAPMPPMKNLDDLPFASQFIKEHLNERDYFFAAATYPSIQIFTGRGCPFRCNFCVYPQTMHGHAFRARS
AENVVAEFEYIAANFPDVKEVVIEDDTFTANKKRVLDICRLLVEKKLNKRLKWLCNARVDLDLETMLAMKKAGCRLIIPG
IESGSQQILDNIKKGTKVEYFYQYVANAKKAGLLIHACYMVGNQGETRETMEETLRLALRLNTDTAQFFPLIPYPGTEAY
QWARENNYIETDYEKYCLPDGTHNTVLSLPDLSAGEMVDFCNRARKKYYLRASYILHRLRVGLRNPSDLKRSLKAFAKLK
RYLFK

Sequences:

>Translated_485_residues
MNIYFINPPFKAEFGKFSRESRSPAITKSGALYYPLWLIYAALYSSKQGHNVSFLDAPAKQLNEEQSLNIIRKTDNEHSL
FVLDTSTPSIKSDVAFAGKLKALYPHSFVVLVGTHPSACAEETLGYSNAVDAVAIGEYDCIVNELANVLDAGKDLREVRG
LCFWDGKEFVRTAPMPPMKNLDDLPFASQFIKEHLNERDYFFAAATYPSIQIFTGRGCPFRCNFCVYPQTMHGHAFRARS
AENVVAEFEYIAANFPDVKEVVIEDDTFTANKKRVLDICRLLVEKKLNKRLKWLCNARVDLDLETMLAMKKAGCRLIIPG
IESGSQQILDNIKKGTKVEYFYQYVANAKKAGLLIHACYMVGNQGETRETMEETLRLALRLNTDTAQFFPLIPYPGTEAY
QWARENNYIETDYEKYCLPDGTHNTVLSLPDLSAGEMVDFCNRARKKYYLRASYILHRLRVGLRNPSDLKRSLKAFAKLK
RYLFK
>Mature_485_residues
MNIYFINPPFKAEFGKFSRESRSPAITKSGALYYPLWLIYAALYSSKQGHNVSFLDAPAKQLNEEQSLNIIRKTDNEHSL
FVLDTSTPSIKSDVAFAGKLKALYPHSFVVLVGTHPSACAEETLGYSNAVDAVAIGEYDCIVNELANVLDAGKDLREVRG
LCFWDGKEFVRTAPMPPMKNLDDLPFASQFIKEHLNERDYFFAAATYPSIQIFTGRGCPFRCNFCVYPQTMHGHAFRARS
AENVVAEFEYIAANFPDVKEVVIEDDTFTANKKRVLDICRLLVEKKLNKRLKWLCNARVDLDLETMLAMKKAGCRLIIPG
IESGSQQILDNIKKGTKVEYFYQYVANAKKAGLLIHACYMVGNQGETRETMEETLRLALRLNTDTAQFFPLIPYPGTEAY
QWARENNYIETDYEKYCLPDGTHNTVLSLPDLSAGEMVDFCNRARKKYYLRASYILHRLRVGLRNPSDLKRSLKAFAKLK
RYLFK

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 55204; Mature: 55204

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIYFINPPFKAEFGKFSRESRSPAITKSGALYYPLWLIYAALYSSKQGHNVSFLDAPAK
CEEEEECCCCCCHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHH
QLNEEQSLNIIRKTDNEHSLFVLDTSTPSIKSDVAFAGKLKALYPHSFVVLVGTHPSACA
HCCCHHCCEEEEECCCCCEEEEEECCCCCCHHCHHHHCCHHEECCCEEEEEEECCCCHHH
EETLGYSNAVDAVAIGEYDCIVNELANVLDAGKDLREVRGLCFWDGKEFVRTAPMPPMKN
HHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHCCEEEECCHHHHHCCCCCCCCC
LDDLPFASQFIKEHLNERDYFFAAATYPSIQIFTGRGCPFRCNFCVYPQTMHGHAFRARS
CCCCCHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCCCHHHCCC
AENVVAEFEYIAANFPDVKEVVIEDDTFTANKKRVLDICRLLVEKKLNKRLKWLCNARVD
HHHHHHHHHHHHCCCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LDLETMLAMKKAGCRLIIPGIESGSQQILDNIKKGTKVEYFYQYVANAKKAGLLIHACYM
CCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHCCHHCCCEEEEEEH
VGNQGETRETMEETLRLALRLNTDTAQFFPLIPYPGTEAYQWARENNYIETDYEKYCLPD
CCCCCCHHHHHHHHHHHHEEECCCCHHEEEECCCCCCHHHHHHHCCCCCCCCCHHHCCCC
GTHNTVLSLPDLSAGEMVDFCNRARKKYYLRASYILHRLRVGLRNPSDLKRSLKAFAKLK
CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RYLFK
HHHCC
>Mature Secondary Structure
MNIYFINPPFKAEFGKFSRESRSPAITKSGALYYPLWLIYAALYSSKQGHNVSFLDAPAK
CEEEEECCCCCCHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHH
QLNEEQSLNIIRKTDNEHSLFVLDTSTPSIKSDVAFAGKLKALYPHSFVVLVGTHPSACA
HCCCHHCCEEEEECCCCCEEEEEECCCCCCHHCHHHHCCHHEECCCEEEEEEECCCCHHH
EETLGYSNAVDAVAIGEYDCIVNELANVLDAGKDLREVRGLCFWDGKEFVRTAPMPPMKN
HHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHCCEEEECCHHHHHCCCCCCCCC
LDDLPFASQFIKEHLNERDYFFAAATYPSIQIFTGRGCPFRCNFCVYPQTMHGHAFRARS
CCCCCHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCCCHHHCCC
AENVVAEFEYIAANFPDVKEVVIEDDTFTANKKRVLDICRLLVEKKLNKRLKWLCNARVD
HHHHHHHHHHHHCCCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LDLETMLAMKKAGCRLIIPGIESGSQQILDNIKKGTKVEYFYQYVANAKKAGLLIHACYM
CCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHCCHHCCCEEEEEEH
VGNQGETRETMEETLRLALRLNTDTAQFFPLIPYPGTEAYQWARENNYIETDYEKYCLPD
CCCCCCHHHHHHHHHHHHEEECCCCHHEEEECCCCCCHHHHHHHCCCCCCCCCHHHCCCC
GTHNTVLSLPDLSAGEMVDFCNRARKKYYLRASYILHRLRVGLRNPSDLKRSLKAFAKLK
CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RYLFK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]