| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150007983
Identifier: 150007983
GI number: 150007983
Start: 1564365
End: 1565822
Strand: Reverse
Name: 150007983
Synonym: BDI_1345
Alternate gene names: NA
Gene position: 1565822-1564365 (Counterclockwise)
Preceding gene: 150007984
Following gene: 150007982
Centisome position: 32.54
GC content: 43.76
Gene sequence:
>1458_bases ATGAACATCTATTTCATCAATCCCCCTTTCAAAGCCGAATTCGGGAAGTTCTCCAGAGAATCCCGTAGTCCGGCAATTAC GAAAAGTGGGGCTTTATATTATCCTCTATGGCTGATTTATGCGGCTTTGTATTCAAGCAAACAGGGACATAATGTCTCTT TTTTGGATGCTCCAGCTAAACAGTTAAATGAGGAACAGTCTTTAAACATTATTCGGAAGACGGATAATGAGCATTCATTG TTTGTTTTAGATACAAGTACGCCTTCCATTAAAAGTGACGTTGCTTTTGCCGGGAAGCTGAAGGCATTGTATCCTCACTC GTTTGTCGTGCTTGTGGGGACTCATCCTTCGGCTTGCGCAGAAGAGACGTTGGGTTATTCGAATGCGGTGGATGCGGTCG CTATTGGGGAATATGATTGTATCGTGAATGAGCTAGCGAATGTTCTGGACGCAGGAAAGGATCTGCGGGAGGTTCGAGGG CTTTGTTTTTGGGACGGGAAGGAGTTTGTACGAACCGCGCCTATGCCACCGATGAAGAATTTGGATGATCTTCCTTTCGC TTCTCAATTTATCAAGGAACATTTAAATGAGAGGGATTACTTTTTCGCTGCTGCCACATATCCCTCTATCCAGATATTTA CCGGGCGTGGATGTCCCTTCCGTTGTAATTTCTGTGTCTACCCGCAAACGATGCATGGGCATGCTTTTCGGGCACGATCC GCAGAGAATGTGGTGGCCGAGTTCGAATACATTGCCGCTAATTTCCCAGATGTGAAGGAGGTAGTAATCGAGGATGATAC ATTTACAGCCAATAAGAAGCGAGTATTGGACATTTGTCGTTTGTTAGTGGAAAAGAAATTGAATAAACGGCTGAAATGGT TATGTAATGCTCGTGTGGACCTTGATTTGGAAACGATGTTGGCTATGAAAAAGGCCGGATGTCGTTTGATTATTCCGGGT ATAGAGAGTGGTAGCCAACAGATATTGGATAACATCAAGAAAGGAACGAAGGTGGAATATTTCTATCAGTATGTTGCCAA CGCTAAAAAGGCGGGCTTGTTAATACATGCTTGTTATATGGTCGGTAACCAAGGCGAAACCCGGGAAACCATGGAAGAGA CTCTTCGGTTAGCGTTAAGGTTGAATACGGATACCGCCCAGTTTTTCCCGTTGATACCTTATCCCGGTACGGAGGCTTAT CAGTGGGCGAGGGAAAATAACTATATAGAGACGGATTATGAGAAGTATTGTTTGCCGGATGGTACACATAACACCGTATT GTCTTTACCGGATCTTTCCGCAGGGGAAATGGTTGATTTCTGTAATAGGGCACGGAAGAAATATTATTTACGTGCCAGTT ACATTTTACACAGGCTGAGAGTCGGTTTGCGTAATCCTTCAGACTTGAAACGTTCGCTTAAGGCATTCGCTAAGTTGAAA CGTTATTTATTTAAATAA
Upstream 100 bases:
>100_bases TCATTCTTCCCTTTTTACTATTTACTGATTATGCTTTATGTTCTGTCATTCAGAACAGCGATATATATGTTTAACAAACT AAGAACCCGATAGATTTATT
Downstream 100 bases:
>100_bases TCATTTGTATTTAACGTGTTGCCTCTTGTATCCATTATAACCCCGTGTTATAATGCGGCTCCTTTTATATCCCAAGCGAT TGAGTCCGTATTGGCTCAAT
Product: Fe-S oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MNIYFINPPFKAEFGKFSRESRSPAITKSGALYYPLWLIYAALYSSKQGHNVSFLDAPAKQLNEEQSLNIIRKTDNEHSL FVLDTSTPSIKSDVAFAGKLKALYPHSFVVLVGTHPSACAEETLGYSNAVDAVAIGEYDCIVNELANVLDAGKDLREVRG LCFWDGKEFVRTAPMPPMKNLDDLPFASQFIKEHLNERDYFFAAATYPSIQIFTGRGCPFRCNFCVYPQTMHGHAFRARS AENVVAEFEYIAANFPDVKEVVIEDDTFTANKKRVLDICRLLVEKKLNKRLKWLCNARVDLDLETMLAMKKAGCRLIIPG IESGSQQILDNIKKGTKVEYFYQYVANAKKAGLLIHACYMVGNQGETRETMEETLRLALRLNTDTAQFFPLIPYPGTEAY QWARENNYIETDYEKYCLPDGTHNTVLSLPDLSAGEMVDFCNRARKKYYLRASYILHRLRVGLRNPSDLKRSLKAFAKLK RYLFK
Sequences:
>Translated_485_residues MNIYFINPPFKAEFGKFSRESRSPAITKSGALYYPLWLIYAALYSSKQGHNVSFLDAPAKQLNEEQSLNIIRKTDNEHSL FVLDTSTPSIKSDVAFAGKLKALYPHSFVVLVGTHPSACAEETLGYSNAVDAVAIGEYDCIVNELANVLDAGKDLREVRG LCFWDGKEFVRTAPMPPMKNLDDLPFASQFIKEHLNERDYFFAAATYPSIQIFTGRGCPFRCNFCVYPQTMHGHAFRARS AENVVAEFEYIAANFPDVKEVVIEDDTFTANKKRVLDICRLLVEKKLNKRLKWLCNARVDLDLETMLAMKKAGCRLIIPG IESGSQQILDNIKKGTKVEYFYQYVANAKKAGLLIHACYMVGNQGETRETMEETLRLALRLNTDTAQFFPLIPYPGTEAY QWARENNYIETDYEKYCLPDGTHNTVLSLPDLSAGEMVDFCNRARKKYYLRASYILHRLRVGLRNPSDLKRSLKAFAKLK RYLFK >Mature_485_residues MNIYFINPPFKAEFGKFSRESRSPAITKSGALYYPLWLIYAALYSSKQGHNVSFLDAPAKQLNEEQSLNIIRKTDNEHSL FVLDTSTPSIKSDVAFAGKLKALYPHSFVVLVGTHPSACAEETLGYSNAVDAVAIGEYDCIVNELANVLDAGKDLREVRG LCFWDGKEFVRTAPMPPMKNLDDLPFASQFIKEHLNERDYFFAAATYPSIQIFTGRGCPFRCNFCVYPQTMHGHAFRARS AENVVAEFEYIAANFPDVKEVVIEDDTFTANKKRVLDICRLLVEKKLNKRLKWLCNARVDLDLETMLAMKKAGCRLIIPG IESGSQQILDNIKKGTKVEYFYQYVANAKKAGLLIHACYMVGNQGETRETMEETLRLALRLNTDTAQFFPLIPYPGTEAY QWARENNYIETDYEKYCLPDGTHNTVLSLPDLSAGEMVDFCNRARKKYYLRASYILHRLRVGLRNPSDLKRSLKAFAKLK RYLFK
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 55204; Mature: 55204
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIYFINPPFKAEFGKFSRESRSPAITKSGALYYPLWLIYAALYSSKQGHNVSFLDAPAK CEEEEECCCCCCHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHH QLNEEQSLNIIRKTDNEHSLFVLDTSTPSIKSDVAFAGKLKALYPHSFVVLVGTHPSACA HCCCHHCCEEEEECCCCCEEEEEECCCCCCHHCHHHHCCHHEECCCEEEEEEECCCCHHH EETLGYSNAVDAVAIGEYDCIVNELANVLDAGKDLREVRGLCFWDGKEFVRTAPMPPMKN HHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHCCEEEECCHHHHHCCCCCCCCC LDDLPFASQFIKEHLNERDYFFAAATYPSIQIFTGRGCPFRCNFCVYPQTMHGHAFRARS CCCCCHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCCCHHHCCC AENVVAEFEYIAANFPDVKEVVIEDDTFTANKKRVLDICRLLVEKKLNKRLKWLCNARVD HHHHHHHHHHHHCCCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LDLETMLAMKKAGCRLIIPGIESGSQQILDNIKKGTKVEYFYQYVANAKKAGLLIHACYM CCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHCCHHCCCEEEEEEH VGNQGETRETMEETLRLALRLNTDTAQFFPLIPYPGTEAYQWARENNYIETDYEKYCLPD CCCCCCHHHHHHHHHHHHEEECCCCHHEEEECCCCCCHHHHHHHCCCCCCCCCHHHCCCC GTHNTVLSLPDLSAGEMVDFCNRARKKYYLRASYILHRLRVGLRNPSDLKRSLKAFAKLK CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RYLFK HHHCC >Mature Secondary Structure MNIYFINPPFKAEFGKFSRESRSPAITKSGALYYPLWLIYAALYSSKQGHNVSFLDAPAK CEEEEECCCCCCHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHH QLNEEQSLNIIRKTDNEHSLFVLDTSTPSIKSDVAFAGKLKALYPHSFVVLVGTHPSACA HCCCHHCCEEEEECCCCCEEEEEECCCCCCHHCHHHHCCHHEECCCEEEEEEECCCCHHH EETLGYSNAVDAVAIGEYDCIVNELANVLDAGKDLREVRGLCFWDGKEFVRTAPMPPMKN HHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHCCEEEECCHHHHHCCCCCCCCC LDDLPFASQFIKEHLNERDYFFAAATYPSIQIFTGRGCPFRCNFCVYPQTMHGHAFRARS CCCCCHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCCCHHHCCC AENVVAEFEYIAANFPDVKEVVIEDDTFTANKKRVLDICRLLVEKKLNKRLKWLCNARVD HHHHHHHHHHHHCCCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LDLETMLAMKKAGCRLIIPGIESGSQQILDNIKKGTKVEYFYQYVANAKKAGLLIHACYM CCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHCCHHCCCEEEEEEH VGNQGETRETMEETLRLALRLNTDTAQFFPLIPYPGTEAYQWARENNYIETDYEKYCLPD CCCCCCHHHHHHHHHHHHEEECCCCHHEEEECCCCCCHHHHHHHCCCCCCCCCHHHCCCC GTHNTVLSLPDLSAGEMVDFCNRARKKYYLRASYILHRLRVGLRNPSDLKRSLKAFAKLK CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RYLFK HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]