| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is yhiI [C]
Identifier: 150007974
GI number: 150007974
Start: 1554454
End: 1555344
Strand: Reverse
Name: yhiI [C]
Synonym: BDI_1336
Alternate gene names: 150007974
Gene position: 1555344-1554454 (Counterclockwise)
Preceding gene: 150007975
Following gene: 150007973
Centisome position: 32.33
GC content: 50.95
Gene sequence:
>891_bases ATGAGACATTTGATTTTTATCAGCTTATGCAGCCTTCTATGGACGGCTTGCGGTAATACAGACAATGATTTTGACGCTTC CGGTACCTTTGAGGCAACCGAGATCTTGGTATCTTCGGAAGCCAACGGAAAGATCATGGAACTGAATATCGAGGAGGGCG ATCGCTTGGATGCCGGCGCCATCGTGGGTTACGTGGATAGTACCCAGCTTTTTCTGCGGAAGATGCAACTCTCTGCCAGC CTTCGCTCAGTAGATATTCGCAAGCCGGATATCCGCAAGCAGATCGCCGTTCTGGAACAACAAATCGCCACGGCCAAGAC CGAGCAGCAGCGACAAGAGAACTTGGTGCGCGCCAAAGCGGGTAACCAAAAGCAACTGGACGATATCGTGAATAACATCA AATATCTCCAGAAACAACTGGATGCCCAATACTCCTCTTTAAGCAAGACGACGGGAGGTGCCGACGCCGAGGCGGAAGGC CTGCAATACCAGATCATGCAATTGGATGATCAACTGATGAAAAGCCGTATCCTCAATCCCCAGACCGGTACGGTATTGGT GAAATACGCCGAGCCGGGAGAGGTGACGGCGGCAGGCAAACCGCTTTACAAGATCGCCGATACGGACTTGCTTTATCTCC GCGCCTATGTGACGGCGGATCAGTTATCCCACCAGAAACTAGGGCAATCTCTCAAGGTCTTCGCCGACTATGGGAATGAT CGCCGGGAATACCCCGGTACGATCACGTGGATCTCCGATAAATCCGAGTTTACCCCGAAAGGTATCCAGACGAAGGACGA ACGGGCTAATTTGGTATATGCCATCAAGATCGCCGTCCGCAACGATGGTTATCTGAAGATCGGGCAATATGGGGAGATTA AATATGAATAA
Upstream 100 bases:
>100_bases CCGGCAAACCGCCGCGGCGCACCGTGTACAGCGCTTGATGACCATTTATAATTATATGTATACAACGAATTAAATAGAGT ATGACAAATACAATTGATTT
Downstream 100 bases:
>100_bases TGAGATTCATATAAATCATATCACCAAGCGTTATGGCGATGTCGAGGCCCTGCGGGATCTGTCGCTGGAGATCGGCTCTG GTGAGTTGTTCGGGTTAATC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF1; Fragment [H]
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MRHLIFISLCSLLWTACGNTDNDFDASGTFEATEILVSSEANGKIMELNIEEGDRLDAGAIVGYVDSTQLFLRKMQLSAS LRSVDIRKPDIRKQIAVLEQQIATAKTEQQRQENLVRAKAGNQKQLDDIVNNIKYLQKQLDAQYSSLSKTTGGADAEAEG LQYQIMQLDDQLMKSRILNPQTGTVLVKYAEPGEVTAAGKPLYKIADTDLLYLRAYVTADQLSHQKLGQSLKVFADYGND RREYPGTITWISDKSEFTPKGIQTKDERANLVYAIKIAVRNDGYLKIGQYGEIKYE
Sequences:
>Translated_296_residues MRHLIFISLCSLLWTACGNTDNDFDASGTFEATEILVSSEANGKIMELNIEEGDRLDAGAIVGYVDSTQLFLRKMQLSAS LRSVDIRKPDIRKQIAVLEQQIATAKTEQQRQENLVRAKAGNQKQLDDIVNNIKYLQKQLDAQYSSLSKTTGGADAEAEG LQYQIMQLDDQLMKSRILNPQTGTVLVKYAEPGEVTAAGKPLYKIADTDLLYLRAYVTADQLSHQKLGQSLKVFADYGND RREYPGTITWISDKSEFTPKGIQTKDERANLVYAIKIAVRNDGYLKIGQYGEIKYE >Mature_296_residues MRHLIFISLCSLLWTACGNTDNDFDASGTFEATEILVSSEANGKIMELNIEEGDRLDAGAIVGYVDSTQLFLRKMQLSAS LRSVDIRKPDIRKQIAVLEQQIATAKTEQQRQENLVRAKAGNQKQLDDIVNNIKYLQKQLDAQYSSLSKTTGGADAEAEG LQYQIMQLDDQLMKSRILNPQTGTVLVKYAEPGEVTAAGKPLYKIADTDLLYLRAYVTADQLSHQKLGQSLKVFADYGND RREYPGTITWISDKSEFTPKGIQTKDERANLVYAIKIAVRNDGYLKIGQYGEIKYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0194 family [H]
Homologues:
Organism=Escherichia coli, GI1789900, Length=275, Percent_Identity=23.6363636363636, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1787013, Length=286, Percent_Identity=26.2237762237762, Blast_Score=81, Evalue=9e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 33131; Mature: 33131
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHLIFISLCSLLWTACGNTDNDFDASGTFEATEILVSSEANGKIMELNIEEGDRLDAGA CCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCE IVGYVDSTQLFLRKMQLSASLRSVDIRKPDIRKQIAVLEQQIATAKTEQQRQENLVRAKA EEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GNQKQLDDIVNNIKYLQKQLDAQYSSLSKTTGGADAEAEGLQYQIMQLDDQLMKSRILNP CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCC QTGTVLVKYAEPGEVTAAGKPLYKIADTDLLYLRAYVTADQLSHQKLGQSLKVFADYGND CCCEEEEEECCCCCEEECCCCEEEECCCCEEEHHHHHHHHHHHHHHHCCCEEEEECCCCC RREYPGTITWISDKSEFTPKGIQTKDERANLVYAIKIAVRNDGYLKIGQYGEIKYE CCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEECCCCCEEEC >Mature Secondary Structure MRHLIFISLCSLLWTACGNTDNDFDASGTFEATEILVSSEANGKIMELNIEEGDRLDAGA CCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCE IVGYVDSTQLFLRKMQLSASLRSVDIRKPDIRKQIAVLEQQIATAKTEQQRQENLVRAKA EEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GNQKQLDDIVNNIKYLQKQLDAQYSSLSKTTGGADAEAEGLQYQIMQLDDQLMKSRILNP CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCC QTGTVLVKYAEPGEVTAAGKPLYKIADTDLLYLRAYVTADQLSHQKLGQSLKVFADYGND CCCEEEEEECCCCCEEECCCCEEEECCCCEEEHHHHHHHHHHHHHHHCCCEEEEECCCCC RREYPGTITWISDKSEFTPKGIQTKDERANLVYAIKIAVRNDGYLKIGQYGEIKYE CCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEECCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10788346 [H]