| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150007957
Identifier: 150007957
GI number: 150007957
Start: 1532038
End: 1534647
Strand: Reverse
Name: 150007957
Synonym: BDI_1318
Alternate gene names: NA
Gene position: 1534647-1532038 (Counterclockwise)
Preceding gene: 150007958
Following gene: 150007956
Centisome position: 31.9
GC content: 50.69
Gene sequence:
>2610_bases ATGAATAATAAAATAAACGATGCTACTATGCGAATAAAACAGTCTATTTATATCTACGCTTTCGCCGCCCTCTTATTAGG CGGTTGCAAAAGCAATAATGAATTAACGATACCTACGAATCTCCGTACGGAATACCTTACGGAGCCTATCGGCTTGGATA CTTCGTCTCCTCGCTTTACATGGGAATACTCCGGAAATGAGGAGGGCTTTAAGGCTTCCCGCTATGAGGTACGGATCGGT ACGAGTCCGGACGACTTGCGGCCCTATGCGGAGGGAATGGCCCTGAAACCTCATACCCGTTATTACTGGAATGTTACGGT ATGGGATGGTGAAGGGCGTCCGTGCGCTACCTCGGAGACGGCTTCTTTCGAGACCGCTAAGTTCGATCCCTCGGATTGGT CCGCCTCTTGGATTACCGATCATAAGGATAAGGAGTTCGAGCCTGCCCCTCTGTTCCGCAAGTCTTTCCCGGTAGGCAAG GAAGTGAAGGATGCCCGTGTGTACGTAGCATCCGCCGGGTATCATGAGCTATTCATCAATGGCGAGCGGGTCGGAACGAA TTATCTGGACCCGGGGTATACGCATTTCGATAAACGTATCTTGTACGTGACGCATGATGTTACCTCTTTGCTGAAGCAAG GCGACAACGCCGTGGCCGCTGTTCTGGGAAACGGCTGGTACAATGAGCAGTCCGTGGCGGTCTGGAATTTCCATGAGGCA CGCTGGCGGGATCGTCCCCGCCTGCTATGTGAGTTACGTATTACCTATACGGATGGTACGACGGAGGTGATTGGCTCGGA CGAGACTTGGAAGACTTCCACCGGGGCCTATACCTATAATAATATATACAGCGGCGATAAATTCGATGCCCGGCTGGAAG AGGCCGGATGGAAAACCGCTCATTTCGACGATAGTAAATGGGAAGCGGCACTTCCGGCGCAGGCTCCGGCACCTCTGTTG GTAGCCCAGCAAATGCCGGGAATCCGTATCACGGAAGAGGTGAGACCCGTGTCTATGAAACGTTTCTCCGATCAATTATA CGTATATTCTTTCCCGAAGAACATGTCCGGCCTTTGCCGCTTAAAGGTGAAAGGCGAGGCGGGAACCCGTATCACGTTAA AACATGGTGAGTTGTTGAAGAAAGACGGTCGCTTGGAGCAAGGCAATATCAATGTATATTATCATCCGGTCAAACCGGAC GAGGTATTCCAGATGGATGTCTTTACCTTGAAAGGTACGGGAGAGGAGGAGATCTTCATGCCTTCCTTCTCTTATCACGG TTTCCAATACGTGGAGGTGGAGAGTAGCCGTCCCGTTACTTTAACGGAAGAGAACTTGACCGGCTTGTTTATGCATACCG ATGTCCGTCCGTCCGGTTCCTTCGCTTGTTCGAATCCTCTATTGAATAAGATATGGGAGGCTACGATGCAGGCTTACCGC AGTAACCTGCACAGTATCCCGACCGATTGTCCGCAACGGGAGAAGAATGGCTGGACAGCCGACGCACATATCGCGATCGA CCTCGGTTTGCTGGGCTTCGATGGTATCACGCTTTATGAGAAATGGATGGATGATATTATCGATAACCAGCGTGAGGCGG GTGAGATTTCCGGTATCATTCCTTCCAGCGGTTGGGGATATGGCGAGTGGCCGGGTCCGGTTTGGGACGCTGTCATGTTC ATCATACCGAACGCCTTGTATGATTATTATGGCGAGTCTCGCAGTATAGAACGCTTATATCCTACGATGCTGCGATATCT GGATTATTTGAAGACGAAAGAGAAAGACGGTTACTTGCCGTTTGGCTTGGGTGACTGGGTGTATTGGAAAGCTACGACGA ATAATGAATATACCTCTACCGCCTACTATTATCTGGATTATAAGTTGATGGCTCGCTTCGCCTCTTTGCTGGGCAAGGAC GCCGCTCCTTATCAAGAGAAAGCGAATACGCTCAAATCCTTGATCAACCAGAAGTTCTTCAACGCCGAGACCGGTGTGTA TGCCGAAGGAACCCAAACGGCGCAAGCCTTGGCCTTGTATCTGGGACTTGTACCGGAAGGAAAGGAACAACTTGTGGCGG ATAAGCTGCGTGAGGTGGTAGCGGGAAATAACTATTTCTTGGATTTTGGTCTATTAGGCAGTAAGACCGTTCCGGCCATG CTTACGAAATATGGCTATATCGAGGATGCCATGAAGATGATCACGAAGACCGAGGCACCTTCTTGGGGATATTGGGTAGA GACGATGGGTTATTCCACATTGCCGGAGACGTGGACACTTAGTCCGAAGTTTGCCGACGCTTCCTTGAACCATGTCTTTA TGGGAGATGTCTCCGCTTGGATGATGAACCAGCTGGCCGGTATCAATCATGACGACTCGGCTCCGGGCTTCCGTCATATC CGTATCACGCCTCATTTCGTGAAAGAACTGGATTGGGCGAAAGGTGAGTACCATTCCGTACGCGGCCGTATCGCCAGCGA ATGGAAACGGGAAGGGGATAAGGTTATGCTTACCGTGACGATTCCGGCTGATTGCTCCGCCGATATCGTGGTAGGCGATC AGACCGAGACCGTATCCGCCGGTACGCATACATTTACATATCCCGCTTAA
Upstream 100 bases:
>100_bases GGGTGATCGAGATCCGACATGAGAAAGGTGCGGACGGTAAGGTGATAAGCTATATCAACGCTCCTGAAGAAATCCGTGTT TGTATGGATTAAAACCAAAT
Downstream 100 bases:
>100_bases TATACTTAGTTGTAGAGACGGGGCGTGCCCCGTCTCCCACCGGCTAATAGTATCTTTAAGTTACCTTTTGGGGGGATGAG ACGGGGCACGCCCCGTCTCT
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Alpha-Rhamnosidase; Glycoside Hydrolase Family; Alfa-L-Rhamnosidase; Rhamnosidase; Hydrolase; Rhamnosidase A; Exported Rhamnosidase A; Secreted Hydrolase; Exported Rhamnosidase Protein; Alpha-L-Rhamnosidase Protein; Secreted Protein; Glycolsyl Hydrolase Family; Alpha-L-Rhamnosidase N-Terminal Domain-Containing Protein; Exported Rhamnosidase; Glycosyl Hydrolase; Alpha-L-Rhamnosidase Family; Basic Proline-Rich Protein; Bacterial Alpha-L-Rhamnosidase Family; Alpha-L-Rhamnosidase Domain-Containing Protein; Alpha-L-Rhamnosidase Domain Protein
Number of amino acids: Translated: 869; Mature: 869
Protein sequence:
>869_residues MNNKINDATMRIKQSIYIYAFAALLLGGCKSNNELTIPTNLRTEYLTEPIGLDTSSPRFTWEYSGNEEGFKASRYEVRIG TSPDDLRPYAEGMALKPHTRYYWNVTVWDGEGRPCATSETASFETAKFDPSDWSASWITDHKDKEFEPAPLFRKSFPVGK EVKDARVYVASAGYHELFINGERVGTNYLDPGYTHFDKRILYVTHDVTSLLKQGDNAVAAVLGNGWYNEQSVAVWNFHEA RWRDRPRLLCELRITYTDGTTEVIGSDETWKTSTGAYTYNNIYSGDKFDARLEEAGWKTAHFDDSKWEAALPAQAPAPLL VAQQMPGIRITEEVRPVSMKRFSDQLYVYSFPKNMSGLCRLKVKGEAGTRITLKHGELLKKDGRLEQGNINVYYHPVKPD EVFQMDVFTLKGTGEEEIFMPSFSYHGFQYVEVESSRPVTLTEENLTGLFMHTDVRPSGSFACSNPLLNKIWEATMQAYR SNLHSIPTDCPQREKNGWTADAHIAIDLGLLGFDGITLYEKWMDDIIDNQREAGEISGIIPSSGWGYGEWPGPVWDAVMF IIPNALYDYYGESRSIERLYPTMLRYLDYLKTKEKDGYLPFGLGDWVYWKATTNNEYTSTAYYYLDYKLMARFASLLGKD AAPYQEKANTLKSLINQKFFNAETGVYAEGTQTAQALALYLGLVPEGKEQLVADKLREVVAGNNYFLDFGLLGSKTVPAM LTKYGYIEDAMKMITKTEAPSWGYWVETMGYSTLPETWTLSPKFADASLNHVFMGDVSAWMMNQLAGINHDDSAPGFRHI RITPHFVKELDWAKGEYHSVRGRIASEWKREGDKVMLTVTIPADCSADIVVGDQTETVSAGTHTFTYPA
Sequences:
>Translated_869_residues MNNKINDATMRIKQSIYIYAFAALLLGGCKSNNELTIPTNLRTEYLTEPIGLDTSSPRFTWEYSGNEEGFKASRYEVRIG TSPDDLRPYAEGMALKPHTRYYWNVTVWDGEGRPCATSETASFETAKFDPSDWSASWITDHKDKEFEPAPLFRKSFPVGK EVKDARVYVASAGYHELFINGERVGTNYLDPGYTHFDKRILYVTHDVTSLLKQGDNAVAAVLGNGWYNEQSVAVWNFHEA RWRDRPRLLCELRITYTDGTTEVIGSDETWKTSTGAYTYNNIYSGDKFDARLEEAGWKTAHFDDSKWEAALPAQAPAPLL VAQQMPGIRITEEVRPVSMKRFSDQLYVYSFPKNMSGLCRLKVKGEAGTRITLKHGELLKKDGRLEQGNINVYYHPVKPD EVFQMDVFTLKGTGEEEIFMPSFSYHGFQYVEVESSRPVTLTEENLTGLFMHTDVRPSGSFACSNPLLNKIWEATMQAYR SNLHSIPTDCPQREKNGWTADAHIAIDLGLLGFDGITLYEKWMDDIIDNQREAGEISGIIPSSGWGYGEWPGPVWDAVMF IIPNALYDYYGESRSIERLYPTMLRYLDYLKTKEKDGYLPFGLGDWVYWKATTNNEYTSTAYYYLDYKLMARFASLLGKD AAPYQEKANTLKSLINQKFFNAETGVYAEGTQTAQALALYLGLVPEGKEQLVADKLREVVAGNNYFLDFGLLGSKTVPAM LTKYGYIEDAMKMITKTEAPSWGYWVETMGYSTLPETWTLSPKFADASLNHVFMGDVSAWMMNQLAGINHDDSAPGFRHI RITPHFVKELDWAKGEYHSVRGRIASEWKREGDKVMLTVTIPADCSADIVVGDQTETVSAGTHTFTYPA >Mature_869_residues MNNKINDATMRIKQSIYIYAFAALLLGGCKSNNELTIPTNLRTEYLTEPIGLDTSSPRFTWEYSGNEEGFKASRYEVRIG TSPDDLRPYAEGMALKPHTRYYWNVTVWDGEGRPCATSETASFETAKFDPSDWSASWITDHKDKEFEPAPLFRKSFPVGK EVKDARVYVASAGYHELFINGERVGTNYLDPGYTHFDKRILYVTHDVTSLLKQGDNAVAAVLGNGWYNEQSVAVWNFHEA RWRDRPRLLCELRITYTDGTTEVIGSDETWKTSTGAYTYNNIYSGDKFDARLEEAGWKTAHFDDSKWEAALPAQAPAPLL VAQQMPGIRITEEVRPVSMKRFSDQLYVYSFPKNMSGLCRLKVKGEAGTRITLKHGELLKKDGRLEQGNINVYYHPVKPD EVFQMDVFTLKGTGEEEIFMPSFSYHGFQYVEVESSRPVTLTEENLTGLFMHTDVRPSGSFACSNPLLNKIWEATMQAYR SNLHSIPTDCPQREKNGWTADAHIAIDLGLLGFDGITLYEKWMDDIIDNQREAGEISGIIPSSGWGYGEWPGPVWDAVMF IIPNALYDYYGESRSIERLYPTMLRYLDYLKTKEKDGYLPFGLGDWVYWKATTNNEYTSTAYYYLDYKLMARFASLLGKD AAPYQEKANTLKSLINQKFFNAETGVYAEGTQTAQALALYLGLVPEGKEQLVADKLREVVAGNNYFLDFGLLGSKTVPAM LTKYGYIEDAMKMITKTEAPSWGYWVETMGYSTLPETWTLSPKFADASLNHVFMGDVSAWMMNQLAGINHDDSAPGFRHI RITPHFVKELDWAKGEYHSVRGRIASEWKREGDKVMLTVTIPADCSADIVVGDQTETVSAGTHTFTYPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 98369; Mature: 98369
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNKINDATMRIKQSIYIYAFAALLLGGCKSNNELTIPTNLRTEYLTEPIGLDTSSPRFT CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHCCCCCCCCCCCEEE WEYSGNEEGFKASRYEVRIGTSPDDLRPYAEGMALKPHTRYYWNVTVWDGEGRPCATSET EEECCCCCCCCCEEEEEEECCCCHHCCHHHCCCEECCCCEEEEEEEEECCCCCCCCCCCC ASFETAKFDPSDWSASWITDHKDKEFEPAPLFRKSFPVGKEVKDARVYVASAGYHELFIN CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEECCCEEEEEE GERVGTNYLDPGYTHFDKRILYVTHDVTSLLKQGDNAVAAVLGNGWYNEQSVAVWNFHEA CCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEECHHH RWRDRPRLLCELRITYTDGTTEVIGSDETWKTSTGAYTYNNIYSGDKFDARLEEAGWKTA HCCCCCCEEEEEEEEEECCCEEEECCCCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEE HFDDSKWEAALPAQAPAPLLVAQQMPGIRITEEVRPVSMKRFSDQLYVYSFPKNMSGLCR CCCCCCCCEECCCCCCCCEEEECCCCCCEEECCCCCCHHHHCCCEEEEEECCCCCCCEEE LKVKGEAGTRITLKHGELLKKDGRLEQGNINVYYHPVKPDEVFQMDVFTLKGTGEEEIFM EEEECCCCCEEEEECCHHHHCCCCEECCCEEEEEECCCCCCEEEEEEEEEECCCCCEEEE PSFSYHGFQYVEVESSRPVTLTEENLTGLFMHTDVRPSGSFACSNPLLNKIWEATMQAYR CCCCCCCEEEEEECCCCCEEEECCCCEEEEEEECCCCCCCCEECCHHHHHHHHHHHHHHH SNLHSIPTDCPQREKNGWTADAHIAIDLGLLGFDGITLYEKWMDDIIDNQREAGEISGII HHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEC PSSGWGYGEWPGPVWDAVMFIIPNALYDYYGESRSIERLYPTMLRYLDYLKTKEKDGYLP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC FGLGDWVYWKATTNNEYTSTAYYYLDYKLMARFASLLGKDAAPYQEKANTLKSLINQKFF CCCCCEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC NAETGVYAEGTQTAQALALYLGLVPEGKEQLVADKLREVVAGNNYFLDFGLLGSKTVPAM CCCCCEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH LTKYGYIEDAMKMITKTEAPSWGYWVETMGYSTLPETWTLSPKFADASLNHVFMGDVSAW HHHCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEECCCCCCCCCCCEEEECCHHHH MMNQLAGINHDDSAPGFRHIRITPHFVKELDWAKGEYHSVRGRIASEWKREGDKVMLTVT HHHHHCCCCCCCCCCCEEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEE IPADCSADIVVGDQTETVSAGTHTFTYPA ECCCCCCEEEECCCCCEEECCCEEEECCC >Mature Secondary Structure MNNKINDATMRIKQSIYIYAFAALLLGGCKSNNELTIPTNLRTEYLTEPIGLDTSSPRFT CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHCCCCCCCCCCCEEE WEYSGNEEGFKASRYEVRIGTSPDDLRPYAEGMALKPHTRYYWNVTVWDGEGRPCATSET EEECCCCCCCCCEEEEEEECCCCHHCCHHHCCCEECCCCEEEEEEEEECCCCCCCCCCCC ASFETAKFDPSDWSASWITDHKDKEFEPAPLFRKSFPVGKEVKDARVYVASAGYHELFIN CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEECCCEEEEEE GERVGTNYLDPGYTHFDKRILYVTHDVTSLLKQGDNAVAAVLGNGWYNEQSVAVWNFHEA CCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEECHHH RWRDRPRLLCELRITYTDGTTEVIGSDETWKTSTGAYTYNNIYSGDKFDARLEEAGWKTA HCCCCCCEEEEEEEEEECCCEEEECCCCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCEE HFDDSKWEAALPAQAPAPLLVAQQMPGIRITEEVRPVSMKRFSDQLYVYSFPKNMSGLCR CCCCCCCCEECCCCCCCCEEEECCCCCCEEECCCCCCHHHHCCCEEEEEECCCCCCCEEE LKVKGEAGTRITLKHGELLKKDGRLEQGNINVYYHPVKPDEVFQMDVFTLKGTGEEEIFM EEEECCCCCEEEEECCHHHHCCCCEECCCEEEEEECCCCCCEEEEEEEEEECCCCCEEEE PSFSYHGFQYVEVESSRPVTLTEENLTGLFMHTDVRPSGSFACSNPLLNKIWEATMQAYR CCCCCCCEEEEEECCCCCEEEECCCCEEEEEEECCCCCCCCEECCHHHHHHHHHHHHHHH SNLHSIPTDCPQREKNGWTADAHIAIDLGLLGFDGITLYEKWMDDIIDNQREAGEISGII HHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEC PSSGWGYGEWPGPVWDAVMFIIPNALYDYYGESRSIERLYPTMLRYLDYLKTKEKDGYLP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC FGLGDWVYWKATTNNEYTSTAYYYLDYKLMARFASLLGKDAAPYQEKANTLKSLINQKFF CCCCCEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC NAETGVYAEGTQTAQALALYLGLVPEGKEQLVADKLREVVAGNNYFLDFGLLGSKTVPAM CCCCCEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH LTKYGYIEDAMKMITKTEAPSWGYWVETMGYSTLPETWTLSPKFADASLNHVFMGDVSAW HHHCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEECCCCCCCCCCCEEEECCHHHH MMNQLAGINHDDSAPGFRHIRITPHFVKELDWAKGEYHSVRGRIASEWKREGDKVMLTVT HHHHHCCCCCCCCCCCEEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEE IPADCSADIVVGDQTETVSAGTHTFTYPA ECCCCCCEEEECCCCCEEECCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA