Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150007925

Identifier: 150007925

GI number: 150007925

Start: 1496552

End: 1497304

Strand: Direct

Name: 150007925

Synonym: BDI_1286

Alternate gene names: NA

Gene position: 1496552-1497304 (Clockwise)

Preceding gene: 150007924

Following gene: 150007926

Centisome position: 31.1

GC content: 44.89

Gene sequence:

>753_bases
ATGATTCCTAAAATCATACATCTCTGTTGGTTAAGTGGTGATCCATATCCACGGAAAATACAAGACTGCCTTGATAGCTG
GAAAAAACACCTTCCTAGCTACGAGATCATTTTATGGGACACGAAACGTTTTAACATCCACGAAGTCCCATGGGTAGAGC
AAGCGTTCAACACCAAGAAATATGCGTTCGCCGCCGATTACATCCGGTTGTACGCTCTTTACCACCATGGAGGAATCTAC
TTAGACTCAGACGTGGAGATACTGAAGAGCCTCGATAACTTTCTTGAGCTGCCCTATTTCGTCGGGGCGGAAACTTCCGG
TACGATTGAGGCGGCCATATTAGGAGCCGAAAAAGGTTGTGACTGGATCAAATGCTGCTTGGATTATTATGAAGGACGAA
ATTTCATACGTGAAGACGGAAGTTATGATATCCGTATGCTACCGGAGATCCTGAACGAGACCATACTCCGTCTAAAGCCC
GTCATAAACATGCCCAGCGGTAGCAATATCGACGATCTGAAGAAAAAAGACCTAGGAGAGGCTGTCTATGTCTTGCCCAA
GGAATACTTCTCGCCTAAGGTATTCGATTCGAGAGAGGTATTCCTCACCCCTGAGACCCATGCGATTCATCATTACCAAA
ACTCATGGTTTTCGCATAAGGCTTTCGCCTACTACCGTACACGGACATTATTCATCAAGATATTCGGATACAAGGCCGTA
AGGTCTTTGGAGAAGATGCTATTAAAACGATAA

Upstream 100 bases:

>100_bases
CCTGCCAGATCAGGGAGTCCGTCCTATCGCTTTCGTGGGAGAGCCAAATGAGTAAAGTATTAAGTGAAATTGATATAGAA
AACAAAAAATAGAATAAGCC

Downstream 100 bases:

>100_bases
TTATCATGAAATGGGCAAAAAAATACATATCCATATACAATCAACCCCTAGACAACGTCCAGGAGGGGATCATTCAAGAA
ATCAAGCAAAAACTAGCGAA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Glycosyltransferase Family; Polysaccharide Biosynthesis Protein; Mannosyltransferase OCH1 ; Glycosyl Transferase; Exopolysaccharide Biosynthesis Protein Glycosyltransferase; Glycosyl Transferase Family Protein; Mannosyltransferase Involved In Polysaccharide Biosynthesis

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MIPKIIHLCWLSGDPYPRKIQDCLDSWKKHLPSYEIILWDTKRFNIHEVPWVEQAFNTKKYAFAADYIRLYALYHHGGIY
LDSDVEILKSLDNFLELPYFVGAETSGTIEAAILGAEKGCDWIKCCLDYYEGRNFIREDGSYDIRMLPEILNETILRLKP
VINMPSGSNIDDLKKKDLGEAVYVLPKEYFSPKVFDSREVFLTPETHAIHHYQNSWFSHKAFAYYRTRTLFIKIFGYKAV
RSLEKMLLKR

Sequences:

>Translated_250_residues
MIPKIIHLCWLSGDPYPRKIQDCLDSWKKHLPSYEIILWDTKRFNIHEVPWVEQAFNTKKYAFAADYIRLYALYHHGGIY
LDSDVEILKSLDNFLELPYFVGAETSGTIEAAILGAEKGCDWIKCCLDYYEGRNFIREDGSYDIRMLPEILNETILRLKP
VINMPSGSNIDDLKKKDLGEAVYVLPKEYFSPKVFDSREVFLTPETHAIHHYQNSWFSHKAFAYYRTRTLFIKIFGYKAV
RSLEKMLLKR
>Mature_250_residues
MIPKIIHLCWLSGDPYPRKIQDCLDSWKKHLPSYEIILWDTKRFNIHEVPWVEQAFNTKKYAFAADYIRLYALYHHGGIY
LDSDVEILKSLDNFLELPYFVGAETSGTIEAAILGAEKGCDWIKCCLDYYEGRNFIREDGSYDIRMLPEILNETILRLKP
VINMPSGSNIDDLKKKDLGEAVYVLPKEYFSPKVFDSREVFLTPETHAIHHYQNSWFSHKAFAYYRTRTLFIKIFGYKAV
RSLEKMLLKR

Specific function: Unknown

COG id: COG3774

COG function: function code M; Mannosyltransferase OCH1 and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29394; Mature: 29394

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPKIIHLCWLSGDPYPRKIQDCLDSWKKHLPSYEIILWDTKRFNIHEVPWVEQAFNTKK
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCHHHHHHCCCH
YAFAADYIRLYALYHHGGIYLDSDVEILKSLDNFLELPYFVGAETSGTIEAAILGAEKGC
HHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHCCCEECCCCCCCEEEEEEECCCCC
DWIKCCLDYYEGRNFIREDGSYDIRMLPEILNETILRLKPVINMPSGSNIDDLKKKDLGE
HHHHHHHHHHHCCHHHHCCCCCCEEHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCC
AVYVLPKEYFSPKVFDSREVFLTPETHAIHHYQNSWFSHKAFAYYRTRTLFIKIFGYKAV
EEEEECHHHCCCCCCCCCEEEECCCHHHHHHHHCCCCCCHHHEEEHHEEEEEEEHHHHHH
RSLEKMLLKR
HHHHHHHHCC
>Mature Secondary Structure
MIPKIIHLCWLSGDPYPRKIQDCLDSWKKHLPSYEIILWDTKRFNIHEVPWVEQAFNTKK
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCHHHHHHCCCH
YAFAADYIRLYALYHHGGIYLDSDVEILKSLDNFLELPYFVGAETSGTIEAAILGAEKGC
HHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHCCCEECCCCCCCEEEEEEECCCCC
DWIKCCLDYYEGRNFIREDGSYDIRMLPEILNETILRLKPVINMPSGSNIDDLKKKDLGE
HHHHHHHHHHHCCHHHHCCCCCCEEHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCC
AVYVLPKEYFSPKVFDSREVFLTPETHAIHHYQNSWFSHKAFAYYRTRTLFIKIFGYKAV
EEEEECHHHCCCCCCCCCEEEECCCHHHHHHHHCCCCCCHHHEEEHHEEEEEEEHHHHHH
RSLEKMLLKR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA