Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is 150007905

Identifier: 150007905

GI number: 150007905

Start: 1469642

End: 1470856

Strand: Reverse

Name: 150007905

Synonym: BDI_1265

Alternate gene names: NA

Gene position: 1470856-1469642 (Counterclockwise)

Preceding gene: 150007906

Following gene: 150007904

Centisome position: 30.57

GC content: 45.27

Gene sequence:

>1215_bases
ATGGCTACAGTAAAAATTAAATTCAGACCTTCCTCTGTGGATGGCAGAGAGGGAACGGTTTATTATCAAGTGATTCACGG
GCGTGTGGCAAGACAGATCAACACTTCCTATAAGTTGTTTCCTGCCGAGTGGGATAAACGTCATTCCCGGATTGTCATCA
TTTCGCCGGATAAGGACAGACAACAATATCTCTTGTCATTAGATAAAAAAATAACGGAAGATATTGACCGGCTGGAGAAT
GTCATCACTGTCTTGGAACGGAAGGGAGGTGCTTTCACTGCCGATGGCGTAACTTCCGCCTTTCACGGCGAGCATCGCGG
GCTTTTCTTTCTTGTTTTTATGCGGGAAGTAATAAATGGCCTGAAGTATCTGGGAAAAGTACGAACCGTTGAGACCTATA
ACTCCGCGCTCAACAGTTTCATGCGATTTATGGGTGGGAAGGACGTGCCGCTCAGGGATATGGATTTCGATCTGATAATT
GCATACGAAGCATGGCTGAAGTCTAAAGAAATCTCCATGAACACGATATCCTTTTACATGCGTATTTTGCGTGCGACCTA
CAACCGTGCCGTAGAGAAGGAACTCGTCACCCAGCGTTTTCCCTTCAAATATGTCTATACGGGAGTCGAGAGGACAACGA
AGCGGGCCGTTCCACTGCGTGTGATGAAACAGCTCCGAATGTTGGACCTGTCAATTTATCCGGCTAAAAGATTTGCGAGG
GACATGCTGCTTTTCAGTTTTTATACAAGGGGGATGTCCATGGTCGATATGGCATTCTTAAGGAAGAAGGATCTTGATAA
CAGTATCCTTACATACCGGCGGAAAAAAACCGGGCAGCGACTTTTTGTAAAATGGGAGCCATGTATGCAGGAGATCGTGG
ACCGTTACAATATTCCTGAGTCTCCATATCTTCTCCCCATCATCGTCAAATCAGGTGTAGACGAGAGAAAACAATATATC
AATGCCTCCCATCGTATCAACAGACATTTGAAAACTATAGGAAAAGAATTAGGCTTATCCGTTCCTTTAACTCATTACGT
AGCGCGCCATTCCTGGGCCAGCGCAGCCCGGAGTAAGAATATTCCGATCTCTGTAATTAGTGAAGGTATGGGGCATGACT
CGGAAACCACTACAAGGATCTATCTGGCCTCATTGGATACTGCCACTATAGATAAAGCGAACAGTCTGATTCTAAAATCC
TTGTGCAGAGAGTAG

Upstream 100 bases:

>100_bases
CATAAGATTCTTATTCTCTGAAATACAATGTTTTGCGTAAACAGGCAAGTGATTGTATCTGATAATTTTGCATCCTGTAA
AATTTTAAATCAGAGAGTTT

Downstream 100 bases:

>100_bases
CATATTGGGCGAATGTACCTCTCTTTTCAAGAGAGGTACAAAAAAGAAATATCCTAAATAAGGGATACTTGTTCAAGGAA
TGATCTTAGATATGGGAATG

Product: integrase

Products: NA

Alternate protein names: Transposase; Tyrosine Type Site-Specific Recombinase; Tyrosine Site-Specific Recombinase; Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Family Protein; Site-Specific Recombinase IntIA; Bacteriophage Integrase; Site-Specific Recombinase; Integrase/Site-Specific Recombinase; Recombinase/Integrase; Prophage; LOW QUALITY PROTEIN Tyrosine Recombinase; Integrase/Transposase

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MATVKIKFRPSSVDGREGTVYYQVIHGRVARQINTSYKLFPAEWDKRHSRIVIISPDKDRQQYLLSLDKKITEDIDRLEN
VITVLERKGGAFTADGVTSAFHGEHRGLFFLVFMREVINGLKYLGKVRTVETYNSALNSFMRFMGGKDVPLRDMDFDLII
AYEAWLKSKEISMNTISFYMRILRATYNRAVEKELVTQRFPFKYVYTGVERTTKRAVPLRVMKQLRMLDLSIYPAKRFAR
DMLLFSFYTRGMSMVDMAFLRKKDLDNSILTYRRKKTGQRLFVKWEPCMQEIVDRYNIPESPYLLPIIVKSGVDERKQYI
NASHRINRHLKTIGKELGLSVPLTHYVARHSWASAARSKNIPISVISEGMGHDSETTTRIYLASLDTATIDKANSLILKS
LCRE

Sequences:

>Translated_404_residues
MATVKIKFRPSSVDGREGTVYYQVIHGRVARQINTSYKLFPAEWDKRHSRIVIISPDKDRQQYLLSLDKKITEDIDRLEN
VITVLERKGGAFTADGVTSAFHGEHRGLFFLVFMREVINGLKYLGKVRTVETYNSALNSFMRFMGGKDVPLRDMDFDLII
AYEAWLKSKEISMNTISFYMRILRATYNRAVEKELVTQRFPFKYVYTGVERTTKRAVPLRVMKQLRMLDLSIYPAKRFAR
DMLLFSFYTRGMSMVDMAFLRKKDLDNSILTYRRKKTGQRLFVKWEPCMQEIVDRYNIPESPYLLPIIVKSGVDERKQYI
NASHRINRHLKTIGKELGLSVPLTHYVARHSWASAARSKNIPISVISEGMGHDSETTTRIYLASLDTATIDKANSLILKS
LCRE
>Mature_403_residues
ATVKIKFRPSSVDGREGTVYYQVIHGRVARQINTSYKLFPAEWDKRHSRIVIISPDKDRQQYLLSLDKKITEDIDRLENV
ITVLERKGGAFTADGVTSAFHGEHRGLFFLVFMREVINGLKYLGKVRTVETYNSALNSFMRFMGGKDVPLRDMDFDLIIA
YEAWLKSKEISMNTISFYMRILRATYNRAVEKELVTQRFPFKYVYTGVERTTKRAVPLRVMKQLRMLDLSIYPAKRFARD
MLLFSFYTRGMSMVDMAFLRKKDLDNSILTYRRKKTGQRLFVKWEPCMQEIVDRYNIPESPYLLPIIVKSGVDERKQYIN
ASHRINRHLKTIGKELGLSVPLTHYVARHSWASAARSKNIPISVISEGMGHDSETTTRIYLASLDTATIDKANSLILKSL
CRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46874; Mature: 46743

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATVKIKFRPSSVDGREGTVYYQVIHGRVARQINTSYKLFPAEWDKRHSRIVIISPDKDR
CCEEEEEEECCCCCCCCCEEEEEEHHHHHHHHHCCCEEEECCCCCCCCCEEEEECCCCHH
QQYLLSLDKKITEDIDRLENVITVLERKGGAFTADGVTSAFHGEHRGLFFLVFMREVING
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHCCCCCCHHHHHHHHHHHHH
LKYLGKVRTVETYNSALNSFMRFMGGKDVPLRDMDFDLIIAYEAWLKSKEISMNTISFYM
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHCCCCCCHHHHHHHH
RILRATYNRAVEKELVTQRFPFKYVYTGVERTTKRAVPLRVMKQLRMLDLSIYPAKRFAR
HHHHHHHHHHHHHHHHHHHCCHHHEECCHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHH
DMLLFSFYTRGMSMVDMAFLRKKDLDNSILTYRRKKTGQRLFVKWEPCMQEIVDRYNIPE
HHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCCCC
SPYLLPIIVKSGVDERKQYINASHRINRHLKTIGKELGLSVPLTHYVARHSWASAARSKN
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
IPISVISEGMGHDSETTTRIYLASLDTATIDKANSLILKSLCRE
CCHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ATVKIKFRPSSVDGREGTVYYQVIHGRVARQINTSYKLFPAEWDKRHSRIVIISPDKDR
CEEEEEEECCCCCCCCCEEEEEEHHHHHHHHHCCCEEEECCCCCCCCCEEEEECCCCHH
QQYLLSLDKKITEDIDRLENVITVLERKGGAFTADGVTSAFHGEHRGLFFLVFMREVING
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHCCCCCCHHHHHHHHHHHHH
LKYLGKVRTVETYNSALNSFMRFMGGKDVPLRDMDFDLIIAYEAWLKSKEISMNTISFYM
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHCCCCCCHHHHHHHH
RILRATYNRAVEKELVTQRFPFKYVYTGVERTTKRAVPLRVMKQLRMLDLSIYPAKRFAR
HHHHHHHHHHHHHHHHHHHCCHHHEECCHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHH
DMLLFSFYTRGMSMVDMAFLRKKDLDNSILTYRRKKTGQRLFVKWEPCMQEIVDRYNIPE
HHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCCCC
SPYLLPIIVKSGVDERKQYINASHRINRHLKTIGKELGLSVPLTHYVARHSWASAARSKN
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
IPISVISEGMGHDSETTTRIYLASLDTATIDKANSLILKSLCRE
CCHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA