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The map label for this gene is 150007882

Identifier: 150007882

GI number: 150007882

Start: 1440405

End: 1441835

Strand: Direct

Name: 150007882

Synonym: BDI_1242

Alternate gene names: NA

Gene position: 1440405-1441835 (Clockwise)

Preceding gene: 150007878

Following gene: 150007883

Centisome position: 29.94

GC content: 45.91

Gene sequence:

>1431_bases
ATGATGAGAAGTGTGATTTTATCAACGTTGCTATTAGTATTGGCGGTCTGTACGGTTTCCGCCCAAAACAGGAATACATC
CATCTGCCGACTAGGCTTCACATACGATATCAGCCAGAGCAAGAACTGGGGAAACAACAAGCCGGTCATTAAAAGTATCA
TCCCTTATTCATCCGCCGAGCAAGCAGGTATTAAGAAATATGACGTGATCGAGGAGATCAACGGGGTACCCGTGACGGAG
GTATCTGTCGACGAGATCCCTCAACTGCTGAATCCCGCCGGAAGAAACGATGTCCTATTGACTATCAGCAACCTTTCCTC
TCCTTCTAAACAAGTATTGGTAAAGAAGGACTGCAAGAAAAGTAACGCCATCACGGAAGACCAGCTGGCGTCCGCCTATG
CGATGTATAGCTTGGAGACAACCAATGAGCAAGAATTCGTATGCCCGTTCAAGACTACCGTCACATCCGACGGCGTAGAT
TTCGGTAACTTCAAGACATTCGCCTTCTCGACCATCGACGAGAATAACCGTAAACTGGAAACGGTCATCAACGAATGCAT
CGAGAACGAGTTGACCAAAAAAGGACTTACGGTTGATATCGCGAAGCCGGATTTATTGATACAGACTTTCTATTTTTTCG
ATAAGAACCCGAACTATCTGGGAGCGAATAAAGTATTGGTAGAAAAAGAACCGACTTACCGGTACAACTTCTCGCACAGT
AAGATGGAGAAATTCCCGTTCTTGAATTACGCCGCCGCCGAAGCGGAAGCCGAATATCTGTTGCAATTCGGTATCCGTAT
CATCGATCAAAAAGATATCCCCGGACGTGTACTCTGGGAATGTGAGGCGAACGAGTTGCTGGAAGACTCTTATCGTTTAG
ACGAATACGCCCGGGTGCATGTCCCGTTGATGTGTATGCAATACCCATACACGAAATACGGACGTAACGTACCGTTCAAG
GTGAGCAAGAAGACCTATAATTATACGGGGATCAGCTACGATATCGATAAATTGGATCAAGTGGTTGACGTAGATCGTAA
CTCTCCCGCTTATGCGGCAGGCATCCGTCCCCGTGACATTATAGAAAAGATCGGCCGCCATAAGATGGATCATTCGGCAG
AGGAGTTCTCATCCGCCTACAAACGCTTTATCACGAACACGATGCAATATCGTGATCCGAAGACGATGTTTACGGATGCG
AACGGTTTCAAGTATTGCATGTTCTGGGACGTATTCAAATATCCCCAAATAGCGGATGCGTCGCAAAGCTCCGATTACTT
GCCGGCGTTCTCTTATTTATACTATTTCGCCCCTTATATTAATCCGTCCGGCAACAACGCCTGTACATTTAATATAAAGC
GTGGCAAGACAAAATTAGAAGTAATTATCCGTCCTACCATTCGCTCTGAAGTGACGGTAGAGATCAAATAA

Upstream 100 bases:

>100_bases
CAAATATATTGCCAACTATTCCACCACATCAAAAATATCTTTACCTTTGCCTATGTTTTAAACGAAACAGGTATTTTTAG
AGTAAATAAAATTCCAGAAT

Downstream 100 bases:

>100_bases
AGATTTTACAAACACGTGATATATCCACAAAATTTTGAACAAAAGACGGGCTTTGATAAGATCCGTCACTTAATCACAGA
AAAATGTTTAAGCCCGCTCG

Product: PDZ domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MMRSVILSTLLLVLAVCTVSAQNRNTSICRLGFTYDISQSKNWGNNKPVIKSIIPYSSAEQAGIKKYDVIEEINGVPVTE
VSVDEIPQLLNPAGRNDVLLTISNLSSPSKQVLVKKDCKKSNAITEDQLASAYAMYSLETTNEQEFVCPFKTTVTSDGVD
FGNFKTFAFSTIDENNRKLETVINECIENELTKKGLTVDIAKPDLLIQTFYFFDKNPNYLGANKVLVEKEPTYRYNFSHS
KMEKFPFLNYAAAEAEAEYLLQFGIRIIDQKDIPGRVLWECEANELLEDSYRLDEYARVHVPLMCMQYPYTKYGRNVPFK
VSKKTYNYTGISYDIDKLDQVVDVDRNSPAYAAGIRPRDIIEKIGRHKMDHSAEEFSSAYKRFITNTMQYRDPKTMFTDA
NGFKYCMFWDVFKYPQIADASQSSDYLPAFSYLYYFAPYINPSGNNACTFNIKRGKTKLEVIIRPTIRSEVTVEIK

Sequences:

>Translated_476_residues
MMRSVILSTLLLVLAVCTVSAQNRNTSICRLGFTYDISQSKNWGNNKPVIKSIIPYSSAEQAGIKKYDVIEEINGVPVTE
VSVDEIPQLLNPAGRNDVLLTISNLSSPSKQVLVKKDCKKSNAITEDQLASAYAMYSLETTNEQEFVCPFKTTVTSDGVD
FGNFKTFAFSTIDENNRKLETVINECIENELTKKGLTVDIAKPDLLIQTFYFFDKNPNYLGANKVLVEKEPTYRYNFSHS
KMEKFPFLNYAAAEAEAEYLLQFGIRIIDQKDIPGRVLWECEANELLEDSYRLDEYARVHVPLMCMQYPYTKYGRNVPFK
VSKKTYNYTGISYDIDKLDQVVDVDRNSPAYAAGIRPRDIIEKIGRHKMDHSAEEFSSAYKRFITNTMQYRDPKTMFTDA
NGFKYCMFWDVFKYPQIADASQSSDYLPAFSYLYYFAPYINPSGNNACTFNIKRGKTKLEVIIRPTIRSEVTVEIK
>Mature_476_residues
MMRSVILSTLLLVLAVCTVSAQNRNTSICRLGFTYDISQSKNWGNNKPVIKSIIPYSSAEQAGIKKYDVIEEINGVPVTE
VSVDEIPQLLNPAGRNDVLLTISNLSSPSKQVLVKKDCKKSNAITEDQLASAYAMYSLETTNEQEFVCPFKTTVTSDGVD
FGNFKTFAFSTIDENNRKLETVINECIENELTKKGLTVDIAKPDLLIQTFYFFDKNPNYLGANKVLVEKEPTYRYNFSHS
KMEKFPFLNYAAAEAEAEYLLQFGIRIIDQKDIPGRVLWECEANELLEDSYRLDEYARVHVPLMCMQYPYTKYGRNVPFK
VSKKTYNYTGISYDIDKLDQVVDVDRNSPAYAAGIRPRDIIEKIGRHKMDHSAEEFSSAYKRFITNTMQYRDPKTMFTDA
NGFKYCMFWDVFKYPQIADASQSSDYLPAFSYLYYFAPYINPSGNNACTFNIKRGKTKLEVIIRPTIRSEVTVEIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54434; Mature: 54434

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRSVILSTLLLVLAVCTVSAQNRNTSICRLGFTYDISQSKNWGNNKPVIKSIIPYSSAE
CHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHCCCCCCH
QAGIKKYDVIEEINGVPVTEVSVDEIPQLLNPAGRNDVLLTISNLSSPSKQVLVKKDCKK
HCCCHHHHHHHHCCCCCEEECCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCC
SNAITEDQLASAYAMYSLETTNEQEFVCPFKTTVTSDGVDFGNFKTFAFSTIDENNRKLE
CCCCCHHHHHHHHEEEEEECCCCCEEEECCHHEECCCCCCCCCEEEEEEEECCCCCCHHH
TVINECIENELTKKGLTVDIAKPDLLIQTFYFFDKNPNYLGANKVLVEKEPTYRYNFSHS
HHHHHHHHHHHHHCCCEEEECCCCEEEEEEEEECCCCCEECCCEEEEECCCCEEECCCHH
KMEKFPFLNYAAAEAEAEYLLQFGIRIIDQKDIPGRVLWECEANELLEDSYRLDEYARVH
HHHHCCCCCHHHHHHHHHHHHHHCHHEEECCCCCCCEEEEECHHHHHHHHHCCCHHHEEE
VPLMCMQYPYTKYGRNVPFKVSKKTYNYTGISYDIDKLDQVVDVDRNSPAYAAGIRPRDI
ECEEEECCCHHHHCCCCCEEEECCEEEECCCEECHHHHHHHHCCCCCCCCEEECCCHHHH
IEKIGRHKMDHSAEEFSSAYKRFITNTMQYRDPKTMFTDANGFKYCMFWDVFKYPQIADA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEEEHHHCCCCCCCC
SQSSDYLPAFSYLYYFAPYINPSGNNACTFNIKRGKTKLEVIIRPTIRSEVTVEIK
CCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCEEEEEC
>Mature Secondary Structure
MMRSVILSTLLLVLAVCTVSAQNRNTSICRLGFTYDISQSKNWGNNKPVIKSIIPYSSAE
CHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHCCCCCCH
QAGIKKYDVIEEINGVPVTEVSVDEIPQLLNPAGRNDVLLTISNLSSPSKQVLVKKDCKK
HCCCHHHHHHHHCCCCCEEECCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCC
SNAITEDQLASAYAMYSLETTNEQEFVCPFKTTVTSDGVDFGNFKTFAFSTIDENNRKLE
CCCCCHHHHHHHHEEEEEECCCCCEEEECCHHEECCCCCCCCCEEEEEEEECCCCCCHHH
TVINECIENELTKKGLTVDIAKPDLLIQTFYFFDKNPNYLGANKVLVEKEPTYRYNFSHS
HHHHHHHHHHHHHCCCEEEECCCCEEEEEEEEECCCCCEECCCEEEEECCCCEEECCCHH
KMEKFPFLNYAAAEAEAEYLLQFGIRIIDQKDIPGRVLWECEANELLEDSYRLDEYARVH
HHHHCCCCCHHHHHHHHHHHHHHCHHEEECCCCCCCEEEEECHHHHHHHHHCCCHHHEEE
VPLMCMQYPYTKYGRNVPFKVSKKTYNYTGISYDIDKLDQVVDVDRNSPAYAAGIRPRDI
ECEEEECCCHHHHCCCCCEEEECCEEEECCCEECHHHHHHHHCCCCCCCCEEECCCHHHH
IEKIGRHKMDHSAEEFSSAYKRFITNTMQYRDPKTMFTDANGFKYCMFWDVFKYPQIADA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEEEHHHCCCCCCCC
SQSSDYLPAFSYLYYFAPYINPSGNNACTFNIKRGKTKLEVIIRPTIRSEVTVEIK
CCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA