Click here to switch to the map view.

The map label for this gene is 150007834

Identifier: 150007834

GI number: 150007834

Start: 1388133

End: 1388942

Strand: Reverse

Name: 150007834

Synonym: BDI_1192

Alternate gene names: NA

Gene position: 1388942-1388133 (Counterclockwise)

Preceding gene: 150007835

Following gene: 150007833

Centisome position: 28.87

GC content: 44.44

Gene sequence:

>810_bases
ATGAAAAAGGTTGTATTTTTACTGATGATGATGACAGTACTATTATCCTCTTGTGGAGAGTATAATAAGATACTGAAGAG
CACGGATTACGAATTGAAATATTCGTACGCGAAGAAATACTTCAACGCGAAGCAATACTCGAAATCCGCTACTCTGCTGG
ATGAACTGGTTACAATCTTTAAAGGAACAGCTTATGCCGAGGAGTCCTTGTACTTGTTGGCGCAAAGCTATTACGGTCAG
AAAGATTATCAGACGGCTTCGCAATACTTCGAGACCTATTATACGACCTATCCGAAAGGGGAGTTTACGGAATTATCCCG
TTTCTATTCCGGTTATGGTTTGTATCTGGACTCTCCGGATCCCCGGTTAGACCAGTCGCAGACGTATAAGGCGATCGAGC
AGTTGCAACTTTATTTGGAGTATTATCCGCAAAGTGAACGGGCCGAGGAAGCGCAGAACATCATGTTCGAGCTTCAGGAG
AAGTTGGCTTACAAGGAATTGATGGCCACCCGCTTGTATTTCAATCTAGGTACCTATATGGGGAATAACTTCCAGTCTTG
CGTGATCACGGCGCAGAACGCCTTGAAGAATTACCCGTATTCCAAGTATCGTGAGGAATTCATGTTCCTTATCATCCGTG
CGAAGTACGAGTTGGCGCTAGTATCCGTAGAGGAGAAGTTGCAGGGCCGTTACCGGGATGTGGTTGACGAGTATTACAAC
TACATGAACGAGTATCCGGAAGGTAACTACGTAAAGCAGGTAACGAAGTTCTACGACTATGCCAGCAAGCGAATTACAGA
TGCATATTAA

Upstream 100 bases:

>100_bases
ATTGATCGCTGCTAGCGATTTATATAAGTTGTAAATATTAACGTTTTGGGTTTCATTTATTCGCCTAAAAGCACTAATTT
TGCACGCTAAAAGTATGTGA

Downstream 100 bases:

>100_bases
GCGAATTTAATCAATAAAACGAAAATGGATTACAGAAAATCAAACGCTCCTACCAATACGGTAACCCGTGACATGATGAA
GTTAAGTGAAGAAACGGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Assembly Lipoprotein YfiO; Outer Membrane Assembly Lipoprotein Yfio; Lipoprotein Protein; TPR Repeat-Containing Protein; Nuclear Transition Protein; DNA Uptake Lipoprotein; DNA Uptake Lipoprotein-Like Protein

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKKVVFLLMMMTVLLSSCGEYNKILKSTDYELKYSYAKKYFNAKQYSKSATLLDELVTIFKGTAYAEESLYLLAQSYYGQ
KDYQTASQYFETYYTTYPKGEFTELSRFYSGYGLYLDSPDPRLDQSQTYKAIEQLQLYLEYYPQSERAEEAQNIMFELQE
KLAYKELMATRLYFNLGTYMGNNFQSCVITAQNALKNYPYSKYREEFMFLIIRAKYELALVSVEEKLQGRYRDVVDEYYN
YMNEYPEGNYVKQVTKFYDYASKRITDAY

Sequences:

>Translated_269_residues
MKKVVFLLMMMTVLLSSCGEYNKILKSTDYELKYSYAKKYFNAKQYSKSATLLDELVTIFKGTAYAEESLYLLAQSYYGQ
KDYQTASQYFETYYTTYPKGEFTELSRFYSGYGLYLDSPDPRLDQSQTYKAIEQLQLYLEYYPQSERAEEAQNIMFELQE
KLAYKELMATRLYFNLGTYMGNNFQSCVITAQNALKNYPYSKYREEFMFLIIRAKYELALVSVEEKLQGRYRDVVDEYYN
YMNEYPEGNYVKQVTKFYDYASKRITDAY
>Mature_269_residues
MKKVVFLLMMMTVLLSSCGEYNKILKSTDYELKYSYAKKYFNAKQYSKSATLLDELVTIFKGTAYAEESLYLLAQSYYGQ
KDYQTASQYFETYYTTYPKGEFTELSRFYSGYGLYLDSPDPRLDQSQTYKAIEQLQLYLEYYPQSERAEEAQNIMFELQE
KLAYKELMATRLYFNLGTYMGNNFQSCVITAQNALKNYPYSKYREEFMFLIIRAKYELALVSVEEKLQGRYRDVVDEYYN
YMNEYPEGNYVKQVTKFYDYASKRITDAY

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32048; Mature: 32048

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVVFLLMMMTVLLSSCGEYNKILKSTDYELKYSYAKKYFNAKQYSKSATLLDELVTIF
CHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGTAYAEESLYLLAQSYYGQKDYQTASQYFETYYTTYPKGEFTELSRFYSGYGLYLDSPD
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEECCCC
PRLDQSQTYKAIEQLQLYLEYYPQSERAEEAQNIMFELQEKLAYKELMATRLYFNLGTYM
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GNNFQSCVITAQNALKNYPYSKYREEFMFLIIRAKYELALVSVEEKLQGRYRDVVDEYYN
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YMNEYPEGNYVKQVTKFYDYASKRITDAY
HHHHCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKVVFLLMMMTVLLSSCGEYNKILKSTDYELKYSYAKKYFNAKQYSKSATLLDELVTIF
CHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGTAYAEESLYLLAQSYYGQKDYQTASQYFETYYTTYPKGEFTELSRFYSGYGLYLDSPD
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEECCCC
PRLDQSQTYKAIEQLQLYLEYYPQSERAEEAQNIMFELQEKLAYKELMATRLYFNLGTYM
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GNNFQSCVITAQNALKNYPYSKYREEFMFLIIRAKYELALVSVEEKLQGRYRDVVDEYYN
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YMNEYPEGNYVKQVTKFYDYASKRITDAY
HHHHCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA