Click here to switch to the map view.

The map label for this gene is 150007824

Identifier: 150007824

GI number: 150007824

Start: 1378264

End: 1378929

Strand: Direct

Name: 150007824

Synonym: BDI_1182

Alternate gene names: NA

Gene position: 1378264-1378929 (Clockwise)

Preceding gene: 150007823

Following gene: 150007825

Centisome position: 28.65

GC content: 44.44

Gene sequence:

>666_bases
ATGTATAGCGAAGACGATATGCTCATGTTGTCGGGGATTCAGCACTTCAGGTTCTGTCCCCGGCAATGGGCTTTGATTCA
CATTGAGCAGCAATGGGATGATAACCGTCTCACCATAGAGGGACAGATTCTGCATAAACATGTGGATGACCCGTTCTATA
GACAGAAATGTGGAGATCAAATAACATTGCGTGCAGTGAATATCGCTTCGCGTGAGTTGGGGCTCTATGGCATTTCCGAT
GCCATAGAGTTGCTACCTTCTCCATCTTTGGAAGATACGATCTTGCATCCTAAATATCCAGGACGTTGGCGACCGGTGGC
TGTGGAGTATAAGCATGGCAGACCCAAAAAGGATGAAGTGGATGAAGTGCAGTTGGCGGCACAAACGATGTGTCTTGAAG
AAATGTACGCAATCCATATACCCTACGGTGTGTTCTTTTATGGAGAACTTCGTCATCGGATAGAGGTGGCTATAACAGAT
GAGTTGCGCAATATCGTCAGACAATGCGCCAGGGATATGCATGAAATATTCAGTAAGGCTGTTATCCCAAAAGCAAAATA
TGAACGACATTGCGACAAATGCTCATTGAAAGAAATCTGTATGCCGACGATAGCCAAGAATTGTACCACGGTAGATACTT
ACCTCAATAAACACTTATATACATGA

Upstream 100 bases:

>100_bases
ATGGAGCACCACGTTCATTCGGTGATTACCATGTCACGATAGACAAGGAACATGTCCCATCAAATGTTACTGTAGAGGAA
CTGATATAAAACAAAAGACA

Downstream 100 bases:

>100_bases
GAAAATTGTTGAATACTTTGTATGTGACGACACCTGAAGCCTATCTGAGTAAGGATGGGCAGAATGTCGTAGTATCAGTC
AAGCAAGAGGAAGTGTTCCG

Product: RecB family exonuclease

Products: NA

Alternate protein names: CRISPR-Associated Exonuclease Cas4 Family Protein; RecB Family Exonuclease; CRISPR-Associated Exonuclease Cas4 Family; Endonuclease; Cas4 Family CRISPR-Associated Protein; Exonuclease RecB Family Protein; Exonuclease N; CRISPR-Associated Cas1 Family Protein; PE-PGRS Family Protein; CRISPR-Associated RecB Family Exonuclease Cas4b; RecB Family Exonuclease Protein

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MYSEDDMLMLSGIQHFRFCPRQWALIHIEQQWDDNRLTIEGQILHKHVDDPFYRQKCGDQITLRAVNIASRELGLYGISD
AIELLPSPSLEDTILHPKYPGRWRPVAVEYKHGRPKKDEVDEVQLAAQTMCLEEMYAIHIPYGVFFYGELRHRIEVAITD
ELRNIVRQCARDMHEIFSKAVIPKAKYERHCDKCSLKEICMPTIAKNCTTVDTYLNKHLYT

Sequences:

>Translated_221_residues
MYSEDDMLMLSGIQHFRFCPRQWALIHIEQQWDDNRLTIEGQILHKHVDDPFYRQKCGDQITLRAVNIASRELGLYGISD
AIELLPSPSLEDTILHPKYPGRWRPVAVEYKHGRPKKDEVDEVQLAAQTMCLEEMYAIHIPYGVFFYGELRHRIEVAITD
ELRNIVRQCARDMHEIFSKAVIPKAKYERHCDKCSLKEICMPTIAKNCTTVDTYLNKHLYT
>Mature_221_residues
MYSEDDMLMLSGIQHFRFCPRQWALIHIEQQWDDNRLTIEGQILHKHVDDPFYRQKCGDQITLRAVNIASRELGLYGISD
AIELLPSPSLEDTILHPKYPGRWRPVAVEYKHGRPKKDEVDEVQLAAQTMCLEEMYAIHIPYGVFFYGELRHRIEVAITD
ELRNIVRQCARDMHEIFSKAVIPKAKYERHCDKCSLKEICMPTIAKNCTTVDTYLNKHLYT

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25893; Mature: 25893

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSEDDMLMLSGIQHFRFCPRQWALIHIEQQWDDNRLTIEGQILHKHVDDPFYRQKCGDQ
CCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEEHHHHCCCHHHHHHCCCE
ITLRAVNIASRELGLYGISDAIELLPSPSLEDTILHPKYPGRWRPVAVEYKHGRPKKDEV
EEEEEEEHHHHHCCCEEHHHHHHHCCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCCCH
DEVQLAAQTMCLEEMYAIHIPYGVFFYGELRHRIEVAITDELRNIVRQCARDMHEIFSKA
HHHHHHHHHHHHHHHHHEECCCHHEEEEEHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHH
VIPKAKYERHCDKCSLKEICMPTIAKNCTTVDTYLNKHLYT
CCCHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MYSEDDMLMLSGIQHFRFCPRQWALIHIEQQWDDNRLTIEGQILHKHVDDPFYRQKCGDQ
CCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEEHHHHCCCHHHHHHCCCE
ITLRAVNIASRELGLYGISDAIELLPSPSLEDTILHPKYPGRWRPVAVEYKHGRPKKDEV
EEEEEEEHHHHHCCCEEHHHHHHHCCCCCCCCCEECCCCCCCCCEEEEEECCCCCCCCCH
DEVQLAAQTMCLEEMYAIHIPYGVFFYGELRHRIEVAITDELRNIVRQCARDMHEIFSKA
HHHHHHHHHHHHHHHHHEECCCHHEEEEEHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHH
VIPKAKYERHCDKCSLKEICMPTIAKNCTTVDTYLNKHLYT
CCCHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA