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The map label for this gene is yjhR [C]

Identifier: 150007774

GI number: 150007774

Start: 1305678

End: 1307600

Strand: Direct

Name: yjhR [C]

Synonym: BDI_1132

Alternate gene names: 150007774

Gene position: 1305678-1307600 (Clockwise)

Preceding gene: 150007769

Following gene: 150007775

Centisome position: 27.14

GC content: 49.09

Gene sequence:

>1923_bases
ATGGGAATTTCATCGCCGCTTGTTGATTTGCAAAATCAATATGATCTCCTGCAGAAAGAATATGAATATGAGAAGGAAAC
ATACCGACAGCAATCCGAGCGTACGGGTTTGCGAAAACGAGTGGCGCAGGGCCTCTGTTGGTATCCGGTCACTCCGGGAC
GCAGTTATTATAACTCCTTAAACCAATTGGTGATCGAGATCGAAAGGACAGAAGACCGGGAGATCGAGCATAATTTTGAG
TACGGGCGCCCGGTTTGCTTCTTTACGGCAGATATCAGTGGTAAATTTAAGTATCTGGATTTCTCCGCCACGATCAGCTA
CGTGCAAGAGGACCGGATGGTGGTAGTTCTCCCCACTCCTTCCGCCTTGATGGATATACAAGGAAAAAGCAATGATCTCG
GCGTGCAACTCTACTTCGACGAGACCAGCTATAAAACGATGTTTTCCGCTCTCTCGGACGTGATGCGGGCAAAAAACAAC
CAACTCTCTCATCTAAGGGATGTATTGCTGGGACAGGAAAAACCGGGACAGCGGGAATTATTCCCGATCCGCTTCCCTTG
GTTGAACCGCTCGCAGGAAGAAGCCGTAAATAAGGTATTGGGAGCGAAACAAGTATCTATCGTACACGGCCCTCCCGGAA
CCGGGAAAACAACCACCTTGGTGGAAGCCATTTACGAGACCCTTCACCGGGAGAATCAAGTGATCGTTTGCGCTCAAAGC
AATACCGCCGTAGACTGCATCTCGGAGAAACTGGTAGATAGAGGCATTAACGTCCTGCGCATCGGGAACCCCACTCGTAT
CAATGACAAGATGCTCTCTTTCACATATGAACGCCGTTTCGAATCGCATCCGGATTATCCCGAATTATGGAGCATCCGGA
AAGCGATACGGGATATACAATCCAATATGCGAAAGAAAAGCCGGGAGGAACGGGATACGATCCGAAACCGCCTCTCCCGT
TTGAAATTCCGGGCGACCGAACTGGAAGTCAAGATCGATACAGAGCTGTTCGACGAGGCTCGTGTCGTTGCTTGCACCTT
GGTTGGCTCCGCAAACCGGGTCATGATGAACCGGCACTTCACGACCTTGTTTATCGATGAGGCCGCCCAAGCCTTGGAAG
CTGCTTGCTGGATAGCGATCAGCAAGGCGGACCGGGTCATACTAGCGGGCGATCATCACCAATTGCCCCCTACTATTAAA
TGTATAGAAGCGGAACGAGAAGGCTTAGGACGTACCTTGATGCAAAAGATAGCCCACACGAAACCGGAAACGGTCTCTCT
CCTGAAGATCCAATATCGTATGCACGAGGATATCATGCGCTTCTCCTCCCAATGGTTCTATCATAACGAACTCGAATCCG
CTCCCGAGGTAAGTGGGCGGGGAATCTTGCGACTGGACACTCCCATCGTATGGTTCGATACGTCCGAGTGCGATTTCACG
GAAAATACGAGAGAAGAGACCATGAGCCGTGTCAACAGGCAAGAGGCGGAATTGCTCGTGGAACAATTACGCTCCTATAT
ACAGAAAATATCCAAGGAGAGAGTGCTGGAGGAGAATATCGACTTCGGATTGATCTCCCCTTATAAGGCGCAGGTACAAT
ACATCCGTAAATTAATCAAACAGGACGCTTTCTTCAAGCCTTTACGCAGACTGATTACCGTACATACCGTAGACGGTTTC
CAAGGGCAAGAACGCGATGTCATCTTGATCAGTTTGGTAAGGGCCAACGAGGATGGAAAGATAGGCTTCTTGAACGACTT
GCGGCGCATGAACGTAGCGATCACCCGTGCCCGTATGAAACTGATGATCTTGGGAGACGCTTCCACCCTTACCCGGCACG
CATTTTATAAAGAACTCTATAATTATATCTCCCAAAGAGGTAAAATAATCACGATCAACACGAAACAAGAGCATGAACTA
TAA

Upstream 100 bases:

>100_bases
CAACTTGGGTACGGAACGATAATTTTAGTACTTTTGTCGCCTACTTCGGGACCTAGAACGCCCGGGCTGTATTTATCCGA
TTAATTGAATTGATAAAGGA

Downstream 100 bases:

>100_bases
ATTATTGGTACTGGATTTAGACGGTACACTGACAAACAGTAAAAAAGAGATCACCCCGTTTACGAGGGAAACCCTTCTGC
AAGCGCAGGAAAAAGGATTG

Product: putative helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 640; Mature: 639

Protein sequence:

>640_residues
MGISSPLVDLQNQYDLLQKEYEYEKETYRQQSERTGLRKRVAQGLCWYPVTPGRSYYNSLNQLVIEIERTEDREIEHNFE
YGRPVCFFTADISGKFKYLDFSATISYVQEDRMVVVLPTPSALMDIQGKSNDLGVQLYFDETSYKTMFSALSDVMRAKNN
QLSHLRDVLLGQEKPGQRELFPIRFPWLNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQVIVCAQS
NTAVDCISEKLVDRGINVLRIGNPTRINDKMLSFTYERRFESHPDYPELWSIRKAIRDIQSNMRKKSREERDTIRNRLSR
LKFRATELEVKIDTELFDEARVVACTLVGSANRVMMNRHFTTLFIDEAAQALEAACWIAISKADRVILAGDHHQLPPTIK
CIEAEREGLGRTLMQKIAHTKPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDTPIVWFDTSECDFT
ENTREETMSRVNRQEAELLVEQLRSYIQKISKERVLEENIDFGLISPYKAQVQYIRKLIKQDAFFKPLRRLITVHTVDGF
QGQERDVILISLVRANEDGKIGFLNDLRRMNVAITRARMKLMILGDASTLTRHAFYKELYNYISQRGKIITINTKQEHEL

Sequences:

>Translated_640_residues
MGISSPLVDLQNQYDLLQKEYEYEKETYRQQSERTGLRKRVAQGLCWYPVTPGRSYYNSLNQLVIEIERTEDREIEHNFE
YGRPVCFFTADISGKFKYLDFSATISYVQEDRMVVVLPTPSALMDIQGKSNDLGVQLYFDETSYKTMFSALSDVMRAKNN
QLSHLRDVLLGQEKPGQRELFPIRFPWLNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQVIVCAQS
NTAVDCISEKLVDRGINVLRIGNPTRINDKMLSFTYERRFESHPDYPELWSIRKAIRDIQSNMRKKSREERDTIRNRLSR
LKFRATELEVKIDTELFDEARVVACTLVGSANRVMMNRHFTTLFIDEAAQALEAACWIAISKADRVILAGDHHQLPPTIK
CIEAEREGLGRTLMQKIAHTKPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDTPIVWFDTSECDFT
ENTREETMSRVNRQEAELLVEQLRSYIQKISKERVLEENIDFGLISPYKAQVQYIRKLIKQDAFFKPLRRLITVHTVDGF
QGQERDVILISLVRANEDGKIGFLNDLRRMNVAITRARMKLMILGDASTLTRHAFYKELYNYISQRGKIITINTKQEHEL
>Mature_639_residues
GISSPLVDLQNQYDLLQKEYEYEKETYRQQSERTGLRKRVAQGLCWYPVTPGRSYYNSLNQLVIEIERTEDREIEHNFEY
GRPVCFFTADISGKFKYLDFSATISYVQEDRMVVVLPTPSALMDIQGKSNDLGVQLYFDETSYKTMFSALSDVMRAKNNQ
LSHLRDVLLGQEKPGQRELFPIRFPWLNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQVIVCAQSN
TAVDCISEKLVDRGINVLRIGNPTRINDKMLSFTYERRFESHPDYPELWSIRKAIRDIQSNMRKKSREERDTIRNRLSRL
KFRATELEVKIDTELFDEARVVACTLVGSANRVMMNRHFTTLFIDEAAQALEAACWIAISKADRVILAGDHHQLPPTIKC
IEAEREGLGRTLMQKIAHTKPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDTPIVWFDTSECDFTE
NTREETMSRVNRQEAELLVEQLRSYIQKISKERVLEENIDFGLISPYKAQVQYIRKLIKQDAFFKPLRRLITVHTVDGFQ
GQERDVILISLVRANEDGKIGFLNDLRRMNVAITRARMKLMILGDASTLTRHAFYKELYNYISQRGKIITINTKQEHEL

Specific function: Unknown

COG id: COG1112

COG function: function code L; Superfamily I DNA and RNA helicases and helicase subunits

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA2/NAM7 helicase family [H]

Homologues:

Organism=Homo sapiens, GI119392094, Length=649, Percent_Identity=29.7380585516179, Blast_Score=273, Evalue=5e-73,
Organism=Homo sapiens, GI18375673, Length=523, Percent_Identity=30.5927342256214, Blast_Score=216, Evalue=7e-56,
Organism=Homo sapiens, GI113722133, Length=506, Percent_Identity=29.8418972332016, Blast_Score=175, Evalue=2e-43,
Organism=Homo sapiens, GI122937299, Length=481, Percent_Identity=25.987525987526, Blast_Score=171, Evalue=2e-42,
Organism=Homo sapiens, GI194272168, Length=471, Percent_Identity=28.2377919320594, Blast_Score=150, Evalue=5e-36,
Organism=Homo sapiens, GI14211540, Length=471, Percent_Identity=28.2377919320594, Blast_Score=150, Evalue=5e-36,
Organism=Homo sapiens, GI14251207, Length=482, Percent_Identity=28.8381742738589, Blast_Score=144, Evalue=3e-34,
Organism=Homo sapiens, GI255759908, Length=467, Percent_Identity=29.1220556745182, Blast_Score=140, Evalue=5e-33,
Organism=Homo sapiens, GI254826809, Length=444, Percent_Identity=24.7747747747748, Blast_Score=128, Evalue=2e-29,
Organism=Homo sapiens, GI255759910, Length=303, Percent_Identity=32.3432343234323, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI28626521, Length=310, Percent_Identity=28.7096774193548, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI156105693, Length=516, Percent_Identity=24.4186046511628, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI156105695, Length=516, Percent_Identity=24.4186046511628, Blast_Score=114, Evalue=4e-25,
Organism=Homo sapiens, GI255759906, Length=420, Percent_Identity=27.6190476190476, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI54792138, Length=462, Percent_Identity=25.5411255411255, Blast_Score=99, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17510163, Length=518, Percent_Identity=30.3088803088803, Blast_Score=197, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI71981659, Length=473, Percent_Identity=30.0211416490486, Blast_Score=146, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17533987, Length=636, Percent_Identity=25.1572327044025, Blast_Score=139, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI17533985, Length=636, Percent_Identity=25.1572327044025, Blast_Score=138, Evalue=9e-33,
Organism=Caenorhabditis elegans, GI133958006, Length=310, Percent_Identity=27.741935483871, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17541326, Length=436, Percent_Identity=25.4587155963303, Blast_Score=83, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17538027, Length=359, Percent_Identity=26.7409470752089, Blast_Score=82, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17535407, Length=260, Percent_Identity=28.8461538461538, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17531513, Length=494, Percent_Identity=24.4939271255061, Blast_Score=80, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17531515, Length=494, Percent_Identity=24.4939271255061, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71986364, Length=493, Percent_Identity=23.5294117647059, Blast_Score=78, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322835, Length=461, Percent_Identity=34.2733188720174, Blast_Score=239, Evalue=8e-64,
Organism=Saccharomyces cerevisiae, GI6323726, Length=534, Percent_Identity=30.8988764044944, Blast_Score=206, Evalue=1e-53,
Organism=Saccharomyces cerevisiae, GI6323462, Length=522, Percent_Identity=28.735632183908, Blast_Score=175, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6321958, Length=511, Percent_Identity=26.614481409002, Blast_Score=155, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI6321024, Length=518, Percent_Identity=25.8687258687259, Blast_Score=131, Evalue=3e-31,
Organism=Drosophila melanogaster, GI18859757, Length=528, Percent_Identity=30.6818181818182, Blast_Score=218, Evalue=1e-56,
Organism=Drosophila melanogaster, GI24640932, Length=555, Percent_Identity=25.045045045045, Blast_Score=151, Evalue=1e-36,
Organism=Drosophila melanogaster, GI161077698, Length=555, Percent_Identity=25.045045045045, Blast_Score=151, Evalue=1e-36,
Organism=Drosophila melanogaster, GI45550425, Length=548, Percent_Identity=26.4598540145985, Blast_Score=142, Evalue=9e-34,
Organism=Drosophila melanogaster, GI281363531, Length=473, Percent_Identity=28.3298097251586, Blast_Score=139, Evalue=5e-33,
Organism=Drosophila melanogaster, GI281363529, Length=473, Percent_Identity=28.3298097251586, Blast_Score=139, Evalue=5e-33,
Organism=Drosophila melanogaster, GI24660647, Length=508, Percent_Identity=24.8031496062992, Blast_Score=135, Evalue=1e-31,
Organism=Drosophila melanogaster, GI221330969, Length=508, Percent_Identity=24.8031496062992, Blast_Score=133, Evalue=4e-31,
Organism=Drosophila melanogaster, GI24649577, Length=468, Percent_Identity=28.6324786324786, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI45553113, Length=462, Percent_Identity=26.8398268398268, Blast_Score=114, Evalue=3e-25,
Organism=Drosophila melanogaster, GI62471854, Length=555, Percent_Identity=22.8828828828829, Blast_Score=108, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24656854, Length=555, Percent_Identity=22.8828828828829, Blast_Score=107, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR004483 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74292; Mature: 74161

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGISSPLVDLQNQYDLLQKEYEYEKETYRQQSERTGLRKRVAQGLCWYPVTPGRSYYNSL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHH
NQLVIEIERTEDREIEHNFEYGRPVCFFTADISGKFKYLDFSATISYVQEDRMVVVLPTP
HHEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEHHHHHHHHCCCCEEEEECCC
SALMDIQGKSNDLGVQLYFDETSYKTMFSALSDVMRAKNNQLSHLRDVLLGQEKPGQREL
HHHEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCE
FPIRFPWLNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQVIVCAQS
EEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECC
NTAVDCISEKLVDRGINVLRIGNPTRINDKMLSFTYERRFESHPDYPELWSIRKAIRDIQ
CCHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
SNMRKKSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRVMMNRHF
HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECHHHHCCCEEEEEEEECCCCEEEEECCC
TTLFIDEAAQALEAACWIAISKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKIAHT
CEEEHHHHHHHHHHHHHEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
KPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDTPIVWFDTSECDFT
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCEEEEECCEEEEEECCCCCCC
ENTREETMSRVNRQEAELLVEQLRSYIQKISKERVLEENIDFGLISPYKAQVQYIRKLIK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
QDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRMNVAITRARMK
CCHHHHHHHHHHEEEEECCCCCCCCCEEEEEEEECCCCCCEEHHHHHHHHHHHEEEEEEE
LMILGDASTLTRHAFYKELYNYISQRGKIITINTKQEHEL
EEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
>Mature Secondary Structure 
GISSPLVDLQNQYDLLQKEYEYEKETYRQQSERTGLRKRVAQGLCWYPVTPGRSYYNSL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHH
NQLVIEIERTEDREIEHNFEYGRPVCFFTADISGKFKYLDFSATISYVQEDRMVVVLPTP
HHEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEHHHHHHHHCCCCEEEEECCC
SALMDIQGKSNDLGVQLYFDETSYKTMFSALSDVMRAKNNQLSHLRDVLLGQEKPGQREL
HHHEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCE
FPIRFPWLNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQVIVCAQS
EEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECC
NTAVDCISEKLVDRGINVLRIGNPTRINDKMLSFTYERRFESHPDYPELWSIRKAIRDIQ
CCHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
SNMRKKSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRVMMNRHF
HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECHHHHCCCEEEEEEEECCCCEEEEECCC
TTLFIDEAAQALEAACWIAISKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKIAHT
CEEEHHHHHHHHHHHHHEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
KPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDTPIVWFDTSECDFT
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCEEEEECCEEEEEECCCCCCC
ENTREETMSRVNRQEAELLVEQLRSYIQKISKERVLEENIDFGLISPYKAQVQYIRKLIK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
QDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRMNVAITRARMK
CCHHHHHHHHHHEEEEECCCCCCCCCEEEEEEEECCCCCCEEHHHHHHHHHHHEEEEEEE
LMILGDASTLTRHAFYKELYNYISQRGKIITINTKQEHEL
EEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]