| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is cusR [H]
Identifier: 150007699
GI number: 150007699
Start: 1222675
End: 1223352
Strand: Direct
Name: cusR [H]
Synonym: BDI_1054
Alternate gene names: 150007699
Gene position: 1222675-1223352 (Clockwise)
Preceding gene: 150007698
Following gene: 150007700
Centisome position: 25.41
GC content: 48.82
Gene sequence:
>678_bases ATGGCGAAGATATTATTAGTAGAAGACGAGGTAAACATCGCCTCTTTTATAGAAAGAGGCTTGCGGGAGTTCGGGCATGA GGTATATGTCGCTTATGACGGTGCCGCTGGTTGGGAACTGACACAGAAGAACGATTTCCAATTGCTGATTCTGGATATTA TAATGCCGAAGATGAACGGCCTGCAACTTTGCAAACAGTACCGGCAACGGTTCGGTTACCATGCTCCCGTGATCATGCTG ACCGCCTTGGGAACCACCGAGGATATCGTTAGTGGGCTGGATGCCGGGGCGGATGATTATCTGGTAAAACCTTTCAGCTT CCAAGAGCTCGAGGCCCGCATAAAGGCGTTATTACGTCGATCGGGAAACGAATCCGTCCATATGGCTCTTCGGTGCGGGG ATCTGGTCTTAGATCCTCCAAGCCATCGGGCTATACGGAATGGGCAGGTCATCGATTTGACGGTAAAGGAATATAGGCTC TTGGAATATTTCATACAGAACCAAGGAACGGCCCTGAGCCGGATGAACTTGCTAAAGAATGTCTGGGACAAGGATTTCGA TACCAATACGAACGTGGTTGATGTCTACGTGAATTATTTGCGCACGAAGATAGACAAGGACTTCGAACCTAAGCTAATCC ATACCGTGGTGGGCGTGGGCTATATGATGGAAGCATGA
Upstream 100 bases:
>100_bases TCACAACCGTGAAAAGAACGTTTCACCTCTGTGATACGATTAGCATCACCCTAAGTACGCATTATTAATGATGGACATTC TTATTAATACATACGATACA
Downstream 100 bases:
>100_bases AGACAGGAAACAAGATCGCTCTCTTTTACTCGGCCATTACCATAGGCGTGATAGCCGTCGTGACGCTTGTCTTCTATTGG GTTTCCACGAGCTATATCTC
Product: two-component system response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MAKILLVEDEVNIASFIERGLREFGHEVYVAYDGAAGWELTQKNDFQLLILDIIMPKMNGLQLCKQYRQRFGYHAPVIML TALGTTEDIVSGLDAGADDYLVKPFSFQELEARIKALLRRSGNESVHMALRCGDLVLDPPSHRAIRNGQVIDLTVKEYRL LEYFIQNQGTALSRMNLLKNVWDKDFDTNTNVVDVYVNYLRTKIDKDFEPKLIHTVVGVGYMMEA
Sequences:
>Translated_225_residues MAKILLVEDEVNIASFIERGLREFGHEVYVAYDGAAGWELTQKNDFQLLILDIIMPKMNGLQLCKQYRQRFGYHAPVIML TALGTTEDIVSGLDAGADDYLVKPFSFQELEARIKALLRRSGNESVHMALRCGDLVLDPPSHRAIRNGQVIDLTVKEYRL LEYFIQNQGTALSRMNLLKNVWDKDFDTNTNVVDVYVNYLRTKIDKDFEPKLIHTVVGVGYMMEA >Mature_224_residues AKILLVEDEVNIASFIERGLREFGHEVYVAYDGAAGWELTQKNDFQLLILDIIMPKMNGLQLCKQYRQRFGYHAPVIMLT ALGTTEDIVSGLDAGADDYLVKPFSFQELEARIKALLRRSGNESVHMALRCGDLVLDPPSHRAIRNGQVIDLTVKEYRLL EYFIQNQGTALSRMNLLKNVWDKDFDTNTNVVDVYVNYLRTKIDKDFEPKLIHTVVGVGYMMEA
Specific function: Member of the two-component regulatory system CusS/CusR. Activates the expression of cusCFBA in response to increasing levels of copper ions, and probably silver ions [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786784, Length=222, Percent_Identity=46.8468468468468, Blast_Score=204, Evalue=4e-54, Organism=Escherichia coli, GI87082012, Length=223, Percent_Identity=40.8071748878924, Blast_Score=164, Evalue=3e-42, Organism=Escherichia coli, GI1789402, Length=221, Percent_Identity=36.6515837104072, Blast_Score=140, Evalue=5e-35, Organism=Escherichia coli, GI1786599, Length=220, Percent_Identity=35, Blast_Score=132, Evalue=1e-32, Organism=Escherichia coli, GI2367329, Length=232, Percent_Identity=39.2241379310345, Blast_Score=124, Evalue=4e-30, Organism=Escherichia coli, GI1790552, Length=223, Percent_Identity=34.9775784753363, Blast_Score=124, Evalue=6e-30, Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=31.7180616740088, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1786911, Length=223, Percent_Identity=32.7354260089686, Blast_Score=117, Evalue=5e-28, Organism=Escherichia coli, GI1788394, Length=226, Percent_Identity=32.3008849557522, Blast_Score=113, Evalue=9e-27, Organism=Escherichia coli, GI1790860, Length=226, Percent_Identity=34.5132743362832, Blast_Score=111, Evalue=3e-26, Organism=Escherichia coli, GI1787375, Length=229, Percent_Identity=31.8777292576419, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1787229, Length=229, Percent_Identity=32.3144104803493, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=31.140350877193, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI145693140, Length=235, Percent_Identity=27.2340425531915, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1790437, Length=115, Percent_Identity=31.304347826087, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788191, Length=122, Percent_Identity=33.6065573770492, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787487, Length=102, Percent_Identity=37.2549019607843, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI48994928, Length=116, Percent_Identity=37.0689655172414, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR006291 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 25678; Mature: 25547
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKILLVEDEVNIASFIERGLREFGHEVYVAYDGAAGWELTQKNDFQLLILDIIMPKMNG CCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCEECCCCCCEEEEEEHHHCCCCH LQLCKQYRQRFGYHAPVIMLTALGTTEDIVSGLDAGADDYLVKPFSFQELEARIKALLRR HHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHH SGNESVHMALRCGDLVLDPPSHRAIRNGQVIDLTVKEYRLLEYFIQNQGTALSRMNLLKN CCCCCEEEEEEECCEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHH VWDKDFDTNTNVVDVYVNYLRTKIDKDFEPKLIHTVVGVGYMMEA HHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure AKILLVEDEVNIASFIERGLREFGHEVYVAYDGAAGWELTQKNDFQLLILDIIMPKMNG CEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCEECCCCCCEEEEEEHHHCCCCH LQLCKQYRQRFGYHAPVIMLTALGTTEDIVSGLDAGADDYLVKPFSFQELEARIKALLRR HHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHH SGNESVHMALRCGDLVLDPPSHRAIRNGQVIDLTVKEYRLLEYFIQNQGTALSRMNLLKN CCCCCEEEEEEECCEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHH VWDKDFDTNTNVVDVYVNYLRTKIDKDFEPKLIHTVVGVGYMMEA HHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]