Click here to switch to the map view.

The map label for this gene is 150007666

Identifier: 150007666

GI number: 150007666

Start: 1182049

End: 1183092

Strand: Reverse

Name: 150007666

Synonym: BDI_1021

Alternate gene names: NA

Gene position: 1183092-1182049 (Counterclockwise)

Preceding gene: 150007667

Following gene: 150007661

Centisome position: 24.59

GC content: 44.35

Gene sequence:

>1044_bases
ATGAATATAGAAACAACAGACAACTCTCCTTTGCTACAGGAATGTATAGAAGAATTGATCAATAGTAAAATCGATGAGGG
GAAAGGAAGAACCGCTGGGAATTATCGAAGCGCATGGAATAAATTATCCACCTTTTTAGGTCCGAGGGTAATGGAATTTA
TATTTGCCGACTTAACGACCGATTTTCTTCATCACTATCTTTTATGGTTGATGCAAGGGGAAGACGGGAAACAGGCTCCC
TTGAAACCGGGTAGTTTGGACTTCTACATTCGTAATCTAAAGACAATGTACAACAAGATCGCCCAAGATAAACAAATGGA
TGTTCCGAGAGAAAGCCCGTTCTCTGGCCTGCAGATAAAGGTCCCACCCACCCGGAAAAGGGCTTTGCCAAGTCTCGACC
TACAAAATCTGGCGACTCTTGAGCGGCCCAAAAACCCATACGCCTGTACGGCCCTTCACTTGGCTCTTTTCTTATTTTAC
GCTAGAGGTATGTGCTTCGTGGATGTCTTTAATCTGCGACACAGCAATATAAACGATGATTATATCCACTACGTACGTAG
CAAGACTGGCGTAGCGATGCAAGTAAAGATCACCCCCGAGATAAAGAACATCATATTCTCTTATCGGCGTTTCAATAACC
CGTGGATATTCCCTTTCTTACACGAGAAAATCAGCGGAGAGGGAGAAGTCACGGCTCAGTCCGCGCTTCGGAGAGTGAAC
CGCCACTTAAAGAAAATGGGAGAGCAATTACACTTCGAACAGCCATTCACTACCTATGTGATGCGGCATAGCTGGGCTTC
CATGATGCTGGAGGCGAATTCAGAAATCGGCATTATCAGCCAATCCTTAGGACATATGTCCCTACGGACTATCGAGATCT
ATCTTGGCCGGATATCAGTATCTAAAATAGACAGGGCCTCCGATAATATGTTGAACAATTTGGTTCGCAGCTCTTCCACT
CGACAAAGAAGTAAAAATAAGGTGATGGCTTTAAGAGACAATCGGCAAGAAATGCAAGAAGCTCATTTCCTCGATTGCCT
CTAA

Upstream 100 bases:

>100_bases
AAATAAAATAAAGCCTCCTCTACCACAATTGGTAAGGGGAGGTTTTGATAAAACCAATCTTTTCTATTTTCGTTATTCTA
TATCCATAAATAGTAATCAT

Downstream 100 bases:

>100_bases
GTTATTCTCATTTATTTAAGATAGTTCATGCAGGAATGCCAAAGGGTAGATTCGTCAAGGCATTCCTGCACAGCCCTTAG
AATGGATACTATTTCTCTTC

Product: tyrosine type site-specific recombinase

Products: NA

Alternate protein names: Transposase; Tyrosine Site-Specific Recombinase; Tyrosine Type Site-Specific Recombinase; Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Family Protein; Site-Specific Recombinase IntIA; Integrase/Site-Specific Recombinase; Recombinase/Integrase; Bacteriophage Integrase; Integrase/Transposase

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MNIETTDNSPLLQECIEELINSKIDEGKGRTAGNYRSAWNKLSTFLGPRVMEFIFADLTTDFLHHYLLWLMQGEDGKQAP
LKPGSLDFYIRNLKTMYNKIAQDKQMDVPRESPFSGLQIKVPPTRKRALPSLDLQNLATLERPKNPYACTALHLALFLFY
ARGMCFVDVFNLRHSNINDDYIHYVRSKTGVAMQVKITPEIKNIIFSYRRFNNPWIFPFLHEKISGEGEVTAQSALRRVN
RHLKKMGEQLHFEQPFTTYVMRHSWASMMLEANSEIGIISQSLGHMSLRTIEIYLGRISVSKIDRASDNMLNNLVRSSST
RQRSKNKVMALRDNRQEMQEAHFLDCL

Sequences:

>Translated_347_residues
MNIETTDNSPLLQECIEELINSKIDEGKGRTAGNYRSAWNKLSTFLGPRVMEFIFADLTTDFLHHYLLWLMQGEDGKQAP
LKPGSLDFYIRNLKTMYNKIAQDKQMDVPRESPFSGLQIKVPPTRKRALPSLDLQNLATLERPKNPYACTALHLALFLFY
ARGMCFVDVFNLRHSNINDDYIHYVRSKTGVAMQVKITPEIKNIIFSYRRFNNPWIFPFLHEKISGEGEVTAQSALRRVN
RHLKKMGEQLHFEQPFTTYVMRHSWASMMLEANSEIGIISQSLGHMSLRTIEIYLGRISVSKIDRASDNMLNNLVRSSST
RQRSKNKVMALRDNRQEMQEAHFLDCL
>Mature_347_residues
MNIETTDNSPLLQECIEELINSKIDEGKGRTAGNYRSAWNKLSTFLGPRVMEFIFADLTTDFLHHYLLWLMQGEDGKQAP
LKPGSLDFYIRNLKTMYNKIAQDKQMDVPRESPFSGLQIKVPPTRKRALPSLDLQNLATLERPKNPYACTALHLALFLFY
ARGMCFVDVFNLRHSNINDDYIHYVRSKTGVAMQVKITPEIKNIIFSYRRFNNPWIFPFLHEKISGEGEVTAQSALRRVN
RHLKKMGEQLHFEQPFTTYVMRHSWASMMLEANSEIGIISQSLGHMSLRTIEIYLGRISVSKIDRASDNMLNNLVRSSST
RQRSKNKVMALRDNRQEMQEAHFLDCL

Specific function: Unknown

COG id: COG4974

COG function: function code L; Site-specific recombinase XerD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40154; Mature: 40154

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIETTDNSPLLQECIEELINSKIDEGKGRTAGNYRSAWNKLSTFLGPRVMEFIFADLTT
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFLHHYLLWLMQGEDGKQAPLKPGSLDFYIRNLKTMYNKIAQDKQMDVPRESPFSGLQIK
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCEEE
VPPTRKRALPSLDLQNLATLERPKNPYACTALHLALFLFYARGMCFVDVFNLRHSNINDD
CCCCHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHH
YIHYVRSKTGVAMQVKITPEIKNIIFSYRRFNNPWIFPFLHEKISGEGEVTAQSALRRVN
HHHHHHCCCCEEEEEEECHHHHHHHHHHHHCCCCEECHHHHHHHCCCCCHHHHHHHHHHH
RHLKKMGEQLHFEQPFTTYVMRHSWASMMLEANSEIGIISQSLGHMSLRTIEIYLGRISV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHEEEEEEEEHHHH
SKIDRASDNMLNNLVRSSSTRQRSKNKVMALRDNRQEMQEAHFLDCL
HHHHHHHHHHHHHHHHCCHHHHHHHCCEEEECCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNIETTDNSPLLQECIEELINSKIDEGKGRTAGNYRSAWNKLSTFLGPRVMEFIFADLTT
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFLHHYLLWLMQGEDGKQAPLKPGSLDFYIRNLKTMYNKIAQDKQMDVPRESPFSGLQIK
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCEEE
VPPTRKRALPSLDLQNLATLERPKNPYACTALHLALFLFYARGMCFVDVFNLRHSNINDD
CCCCHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHH
YIHYVRSKTGVAMQVKITPEIKNIIFSYRRFNNPWIFPFLHEKISGEGEVTAQSALRRVN
HHHHHHCCCCEEEEEEECHHHHHHHHHHHHCCCCEECHHHHHHHCCCCCHHHHHHHHHHH
RHLKKMGEQLHFEQPFTTYVMRHSWASMMLEANSEIGIISQSLGHMSLRTIEIYLGRISV
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHEEEEEEEEHHHH
SKIDRASDNMLNNLVRSSSTRQRSKNKVMALRDNRQEMQEAHFLDCL
HHHHHHHHHHHHHHHHCCHHHHHHHCCEEEECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA