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The map label for this gene is yijO [C]

Identifier: 150007626

GI number: 150007626

Start: 1139119

End: 1140036

Strand: Reverse

Name: yijO [C]

Synonym: BDI_0979

Alternate gene names: 150007626

Gene position: 1140036-1139119 (Counterclockwise)

Preceding gene: 150007630

Following gene: 150007625

Centisome position: 23.69

GC content: 44.66

Gene sequence:

>918_bases
ATGGATAAGATACTTAACTTAGATAGTGTAGACCTATATAACAAACTATACGGCCTCGAAACCCTAAATCCGCTTGTCAG
TGTCATAGATTTGAATAAAGCGACGAGTAGTGTAGATCTCATCCGCTTCAATTACGGCATCTACGCACTGTATCTAAAAC
TAGAGAAAGCCTGCGATATCAAATACGGACGCCAGACATACGATTACCAAGAAGGCACGATCGTTTGCTTCGCCCCCGGA
CAAACTGCGGAAACAAATCCGACAACCGATAAAGTCCAAGTAAACGCACATGGTATTCTTTTCCATCCCGATTTACTGCG
TGGAACGTCACTCGGAAAGAATATAAAGAAATATACGTTCTTTTCTTACGAGGTAAACGAGGCGTTGCATCTCTCGGAAG
AAGAAAGATCTATCGTGATGGATTGCCTGAAGATCATCCGTATGGAACTGGAACATGGCGTGGATAAACATAGTAAAACC
TTACTTGTAAACCATATCGAACTGCTGCTTAATTATTGTATGCGTTTTTATGAAAGGCAGTTCATCACCCGAGGCAAGAC
AAACCGGGATGTGCTGACACGTTTCGAAAACCTGTTGGATGAGTATTTCGAAAGTACACTCGCCGAACAGGACGGATTGC
CTACGGTGAAATACTTTGCCGACAAGCTTTGCCTCTCATCGAACTATTTCGGTGACATGTTCAAGAAGGAAACCGGCAAA
TCACCGCAGGAATACATCCAAGAGAAAGTAATCGAGCTAGCCAAAGAACGTATCTCCGGCACGGCGGACACAGTCAGCCA
AATCGCATATTCCCTCGGTTTCCAATATCCGCAGCACTCCTGTCGGCTATTCAAGAAACGGGTAGGGTACACGCCAAGTG
AATACCGTGCGCAGATCGGTCTATCAACGAATCTATAG

Upstream 100 bases:

>100_bases
TCCGTAACAATGGTTATATAATCCGTAATTAGGGTTATAACTATATATGAATTATCCTCTATTTTTGCGTACAGAATTAT
TGATTAAATACGTACGGCTT

Downstream 100 bases:

>100_bases
AAGGCGTTCAAGAAGATGTTAGATATTAAGACTGTATATGAATGTAACCGGTGCTTGGGATGCAAGACGCTGCACCCACA
AGTAAGCCTCATCAATCTAG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; AraC Family Transcriptional Regulator; Transcriptional Regulator Arac Family; Transcriptional Regulator AraC Family Protein; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcription Regulator; Bacterial Regulatory Helix-Turn-Helix Protein; Transcriptional Regulator AraC Type; Two Component Transcriptional Regulator AraC Family

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MDKILNLDSVDLYNKLYGLETLNPLVSVIDLNKATSSVDLIRFNYGIYALYLKLEKACDIKYGRQTYDYQEGTIVCFAPG
QTAETNPTTDKVQVNAHGILFHPDLLRGTSLGKNIKKYTFFSYEVNEALHLSEEERSIVMDCLKIIRMELEHGVDKHSKT
LLVNHIELLLNYCMRFYERQFITRGKTNRDVLTRFENLLDEYFESTLAEQDGLPTVKYFADKLCLSSNYFGDMFKKETGK
SPQEYIQEKVIELAKERISGTADTVSQIAYSLGFQYPQHSCRLFKKRVGYTPSEYRAQIGLSTNL

Sequences:

>Translated_305_residues
MDKILNLDSVDLYNKLYGLETLNPLVSVIDLNKATSSVDLIRFNYGIYALYLKLEKACDIKYGRQTYDYQEGTIVCFAPG
QTAETNPTTDKVQVNAHGILFHPDLLRGTSLGKNIKKYTFFSYEVNEALHLSEEERSIVMDCLKIIRMELEHGVDKHSKT
LLVNHIELLLNYCMRFYERQFITRGKTNRDVLTRFENLLDEYFESTLAEQDGLPTVKYFADKLCLSSNYFGDMFKKETGK
SPQEYIQEKVIELAKERISGTADTVSQIAYSLGFQYPQHSCRLFKKRVGYTPSEYRAQIGLSTNL
>Mature_305_residues
MDKILNLDSVDLYNKLYGLETLNPLVSVIDLNKATSSVDLIRFNYGIYALYLKLEKACDIKYGRQTYDYQEGTIVCFAPG
QTAETNPTTDKVQVNAHGILFHPDLLRGTSLGKNIKKYTFFSYEVNEALHLSEEERSIVMDCLKIIRMELEHGVDKHSKT
LLVNHIELLLNYCMRFYERQFITRGKTNRDVLTRFENLLDEYFESTLAEQDGLPTVKYFADKLCLSSNYFGDMFKKETGK
SPQEYIQEKVIELAKERISGTADTVSQIAYSLGFQYPQHSCRLFKKRVGYTPSEYRAQIGLSTNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35146; Mature: 35146

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKILNLDSVDLYNKLYGLETLNPLVSVIDLNKATSSVDLIRFNYGIYALYLKLEKACDI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEHHHHHCC
KYGRQTYDYQEGTIVCFAPGQTAETNPTTDKVQVNAHGILFHPDLLRGTSLGKNIKKYTF
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCEEEECCHHHHCCHHCCCHHHHEE
FSYEVNEALHLSEEERSIVMDCLKIIRMELEHGVDKHSKTLLVNHIELLLNYCMRFYERQ
EEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FITRGKTNRDVLTRFENLLDEYFESTLAEQDGLPTVKYFADKLCLSSNYFGDMFKKETGK
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCC
SPQEYIQEKVIELAKERISGTADTVSQIAYSLGFQYPQHSCRLFKKRVGYTPSEYRAQIG
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHEEEC
LSTNL
CCCCC
>Mature Secondary Structure
MDKILNLDSVDLYNKLYGLETLNPLVSVIDLNKATSSVDLIRFNYGIYALYLKLEKACDI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEHHHHHCC
KYGRQTYDYQEGTIVCFAPGQTAETNPTTDKVQVNAHGILFHPDLLRGTSLGKNIKKYTF
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCEEEECCHHHHCCHHCCCHHHHEE
FSYEVNEALHLSEEERSIVMDCLKIIRMELEHGVDKHSKTLLVNHIELLLNYCMRFYERQ
EEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FITRGKTNRDVLTRFENLLDEYFESTLAEQDGLPTVKYFADKLCLSSNYFGDMFKKETGK
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCC
SPQEYIQEKVIELAKERISGTADTVSQIAYSLGFQYPQHSCRLFKKRVGYTPSEYRAQIG
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHEEEC
LSTNL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA