| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150007602
Identifier: 150007602
GI number: 150007602
Start: 1105078
End: 1106196
Strand: Direct
Name: 150007602
Synonym: BDI_0955
Alternate gene names: NA
Gene position: 1105078-1106196 (Clockwise)
Preceding gene: 150007601
Following gene: 150007603
Centisome position: 22.97
GC content: 43.25
Gene sequence:
>1119_bases ATGGAAGATAAATTAGTGACATTGGCTATCCACACGTTTGAGAAAGCCCAGATTCTCAAGACAATCCTCGAAACAGAAGG CATAGAGGTCTATATACATAATGTAAACCAGATCCAGCCTGTCGTTTCGGCAGGAGTACGTGTGCGTATTAAGGAGAGTG ATTTACCGCATGCTTTACGCATTATTGAAGACAATAAGTGGTTTGAGGAACCAAAGGAGGAAGAGGCGAAGGTTAATGCG GTCAAGAAAGTTCTGATCCCGATTGATTTCTCGGATTATTCCGCCAAGGCTTGTGAGTTGGGAATTAATTACGCTCATGC GGTAGGTGCGGAGGTGATGATCATGCACGCCTATTTCAGCCCCTATTTTCCATCCGCTATCCCGATGGGAGATACATTGG CTTACCAAGTAAACGAGGAGGAATCCGTACAGCATATCTTACAACGTGTCCGTATCGATATGGAGAATATTTGTACGCAT ATCAACCGGAAGATGTCCTCTGGCGAATTACCAAAGGTAAAATACGATTATGTATTACGTGAAGGCTTGCCGGAAGAGGA GATCATCGCTTATAGTAAGGAGTATCATCCGACATTGATCGTGATGGGAACGAGAGGTAAGAGCCAAAAAGATATGGATC TGATCGGTAGCGTGACCGGAGAGGTTATCGAGGTGAACCGGGTTCCTGTATTGGCGATACCGGAGAATGTTCCTTTCACG GATTTGAGAGACGCTAAGAATATCGCTTTCGCGACATCGTTTAACCAGAGAGATTTGGTTGCGTTTGACGAGTTTATGGA AATCATCAAAGGCTTTGATCTTAATATCCATCTATTCAATATCTCTACCAGTAATGATGAATGGAATGAGATTCGTTTAA CGGGCGTTCGTGAATATTTCAAGAAACAATATCCACATGCCCATATTTCCCATACGGTTCTAGCCGATGGTGACTTGCTG TTAGCCATCGAGAAATTTGTTCGTGATAAACAAATTGATGTTATAGCCCTAAGCACATATCGCCGTAATATCCTAGCCCG GATGTTCAATCCTTCGATCGCGAGAAAGATGTTATTCCACACCGATACTCCGTTATTGGTAATCGATAGCAAGAAATAG
Upstream 100 bases:
>100_bases TATAAAAAATCCCATAGCTAAATGAAAGAACGCTTTGGGATTTTTTTATATTCAACAATTCATAAATCCCGATTGTTTCA TCTATAAAAATGTATTGAGT
Downstream 100 bases:
>100_bases CTTCTTATTCAAGTAACAAATAAAAAGTGGATATGAGAAAAGGCTTATCCACTTTTTTATTATATACCATGTGCTTAAAG CAATCTTTGTATCTTTGGCG
Product: putative universal stress protein UspA
Products: NA
Alternate protein names: Universal Stress Protein; Uspa Domain-Containing Protein; UspA Domain Protein; Universal Stress Protein Family Protein; Uspa DomaiN-Containing Protein; Universal Stress Protein UspA; Universal Stress Protein E
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MEDKLVTLAIHTFEKAQILKTILETEGIEVYIHNVNQIQPVVSAGVRVRIKESDLPHALRIIEDNKWFEEPKEEEAKVNA VKKVLIPIDFSDYSAKACELGINYAHAVGAEVMIMHAYFSPYFPSAIPMGDTLAYQVNEEESVQHILQRVRIDMENICTH INRKMSSGELPKVKYDYVLREGLPEEEIIAYSKEYHPTLIVMGTRGKSQKDMDLIGSVTGEVIEVNRVPVLAIPENVPFT DLRDAKNIAFATSFNQRDLVAFDEFMEIIKGFDLNIHLFNISTSNDEWNEIRLTGVREYFKKQYPHAHISHTVLADGDLL LAIEKFVRDKQIDVIALSTYRRNILARMFNPSIARKMLFHTDTPLLVIDSKK
Sequences:
>Translated_372_residues MEDKLVTLAIHTFEKAQILKTILETEGIEVYIHNVNQIQPVVSAGVRVRIKESDLPHALRIIEDNKWFEEPKEEEAKVNA VKKVLIPIDFSDYSAKACELGINYAHAVGAEVMIMHAYFSPYFPSAIPMGDTLAYQVNEEESVQHILQRVRIDMENICTH INRKMSSGELPKVKYDYVLREGLPEEEIIAYSKEYHPTLIVMGTRGKSQKDMDLIGSVTGEVIEVNRVPVLAIPENVPFT DLRDAKNIAFATSFNQRDLVAFDEFMEIIKGFDLNIHLFNISTSNDEWNEIRLTGVREYFKKQYPHAHISHTVLADGDLL LAIEKFVRDKQIDVIALSTYRRNILARMFNPSIARKMLFHTDTPLLVIDSKK >Mature_372_residues MEDKLVTLAIHTFEKAQILKTILETEGIEVYIHNVNQIQPVVSAGVRVRIKESDLPHALRIIEDNKWFEEPKEEEAKVNA VKKVLIPIDFSDYSAKACELGINYAHAVGAEVMIMHAYFSPYFPSAIPMGDTLAYQVNEEESVQHILQRVRIDMENICTH INRKMSSGELPKVKYDYVLREGLPEEEIIAYSKEYHPTLIVMGTRGKSQKDMDLIGSVTGEVIEVNRVPVLAIPENVPFT DLRDAKNIAFATSFNQRDLVAFDEFMEIIKGFDLNIHLFNISTSNDEWNEIRLTGVREYFKKQYPHAHISHTVLADGDLL LAIEKFVRDKQIDVIALSTYRRNILARMFNPSIARKMLFHTDTPLLVIDSKK
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42573; Mature: 42573
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDKLVTLAIHTFEKAQILKTILETEGIEVYIHNVNQIQPVVSAGVRVRIKESDLPHALR CCCCEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCEEEEEECCCCCCEEE IIEDNKWFEEPKEEEAKVNAVKKVLIPIDFSDYSAKACELGINYAHAVGAEVMIMHAYFS EEECCCCCCCCCHHHHHHHHEEEEEEEECCCCCCCCHHHHCCCHHHHCCCEEEEEEECCC PYFPSAIPMGDTLAYQVNEEESVQHILQRVRIDMENICTHINRKMSSGELPKVKYDYVLR CCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEHHHHHH EGLPEEEIIAYSKEYHPTLIVMGTRGKSQKDMDLIGSVTGEVIEVNRVPVLAIPENVPFT CCCCHHHHHEECCCCCCEEEEEECCCCCCCCHHHHHHCCCCEEEECCEEEEECCCCCCCC DLRDAKNIAFATSFNQRDLVAFDEFMEIIKGFDLNIHLFNISTSNDEWNEIRLTGVREYF CCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEHHHHHHH KKQYPHAHISHTVLADGDLLLAIEKFVRDKQIDVIALSTYRRNILARMFNPSIARKMLFH HHHCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCHHHHHHHHHC TDTPLLVIDSKK CCCCEEEEECCC >Mature Secondary Structure MEDKLVTLAIHTFEKAQILKTILETEGIEVYIHNVNQIQPVVSAGVRVRIKESDLPHALR CCCCEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCEEEEEECCCCCCEEE IIEDNKWFEEPKEEEAKVNAVKKVLIPIDFSDYSAKACELGINYAHAVGAEVMIMHAYFS EEECCCCCCCCCHHHHHHHHEEEEEEEECCCCCCCCHHHHCCCHHHHCCCEEEEEEECCC PYFPSAIPMGDTLAYQVNEEESVQHILQRVRIDMENICTHINRKMSSGELPKVKYDYVLR CCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEHHHHHH EGLPEEEIIAYSKEYHPTLIVMGTRGKSQKDMDLIGSVTGEVIEVNRVPVLAIPENVPFT CCCCHHHHHEECCCCCCEEEEEECCCCCCCCHHHHHHCCCCEEEECCEEEEECCCCCCCC DLRDAKNIAFATSFNQRDLVAFDEFMEIIKGFDLNIHLFNISTSNDEWNEIRLTGVREYF CCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEHHHHHHH KKQYPHAHISHTVLADGDLLLAIEKFVRDKQIDVIALSTYRRNILARMFNPSIARKMLFH HHHCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCHHHHHHHHHC TDTPLLVIDSKK CCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA