| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150007599
Identifier: 150007599
GI number: 150007599
Start: 1103088
End: 1103855
Strand: Direct
Name: 150007599
Synonym: BDI_0952
Alternate gene names: NA
Gene position: 1103088-1103855 (Clockwise)
Preceding gene: 150007598
Following gene: 150007600
Centisome position: 22.93
GC content: 45.96
Gene sequence:
>768_bases ATGAAGATGACTATAAATTTAAGAAAGGTATTGTTTTTCTTATTGACTCTATGTCTGATAGGATCTGCTTATGCGCAAGA TACCGCCTTGAAGGAGGCCGAGGTCGCTTACACGAAAGAAGATTACGCAAAGGCGATCGAGCTATATGAGGGAATCTTGA AGAGCAATGGCGAGTCTGCCGCCGTTTATTATAATTTGGGAAATACCTATTATAAGGCGGGTAAGATCGCTCCGGCTATA TTGAACTACGAACGTTGTCTTCTGCTGGATCCGGGTGATAGCGATGCTCGCTTCAATTTACAGATGGCCCGTCAGAAGAC CATCGATAAGATTGAGCCGGTTGGTGATTTCTTCTTGGTCAAATGGTTTAAGAGCGTGGAGAACCTCGGTTCCGCAGACT CTTGGGCGAAGACAGGTATCGTGTGCTTCCTGTTGTTTATCGGTTGCTTGATCTTGTTCTTTTTCTCTCGTTGGGTACGC TTGAAGAAGATCGGTTTCTATTTGGGTGTCCTATTTATTATCATGGTTGTTTTTGCCAATATATTCGCCAGCGACCAGAA GGATGAGATGATAAACCGTAAACACGCTATCGTATTCGCCCCGACCGTTACGGTGAAAAGCTCGCCTGACGCTAGCGGTA CGGATCTTTTCGTATTACACGAGGGAACGAACGTGACCGTGAAGAGCACGCTCGGCGAATGGAGCGAGATCGAGCTTGAG GACGGGAACGTAGGATGGATGCCTAGTAAAGACATAGAAAAAATCTGA
Upstream 100 bases:
>100_bases CGTTACGCTCCGTCCCAAGCGTCGGACGCTATGGATAAGTTGTATGAGCTGACGGTAGACGCTATTGGTAAAATGGAGAA TACAATTAAAAAGTAAGAAG
Downstream 100 bases:
>100_bases TACATGCTAGAACAATTATTGGTTTGGGAACGTGATGCGTTCTTTATGCTTAACGGTAGCGACTCCGCTTTTTTAGATCG CTTTATGTGGATCTATTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: TPR Repeat-Containing Protein; BatE Protein; BatD Protein; Aerotolerance-Related Protein BatE; BatE TRP Domain Containing Protein; Tetratricopeptide Repeat Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; TRP Domain-Containing Protein BatE; Tetratricopeptide TPR_2 Repeat Protein; SH3 Type 3 Domain Protein; BatD/BatE Protein; Tetratricopeptide Repeat Domain Protein
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MKMTINLRKVLFFLLTLCLIGSAYAQDTALKEAEVAYTKEDYAKAIELYEGILKSNGESAAVYYNLGNTYYKAGKIAPAI LNYERCLLLDPGDSDARFNLQMARQKTIDKIEPVGDFFLVKWFKSVENLGSADSWAKTGIVCFLLFIGCLILFFFSRWVR LKKIGFYLGVLFIIMVVFANIFASDQKDEMINRKHAIVFAPTVTVKSSPDASGTDLFVLHEGTNVTVKSTLGEWSEIELE DGNVGWMPSKDIEKI
Sequences:
>Translated_255_residues MKMTINLRKVLFFLLTLCLIGSAYAQDTALKEAEVAYTKEDYAKAIELYEGILKSNGESAAVYYNLGNTYYKAGKIAPAI LNYERCLLLDPGDSDARFNLQMARQKTIDKIEPVGDFFLVKWFKSVENLGSADSWAKTGIVCFLLFIGCLILFFFSRWVR LKKIGFYLGVLFIIMVVFANIFASDQKDEMINRKHAIVFAPTVTVKSSPDASGTDLFVLHEGTNVTVKSTLGEWSEIELE DGNVGWMPSKDIEKI >Mature_255_residues MKMTINLRKVLFFLLTLCLIGSAYAQDTALKEAEVAYTKEDYAKAIELYEGILKSNGESAAVYYNLGNTYYKAGKIAPAI LNYERCLLLDPGDSDARFNLQMARQKTIDKIEPVGDFFLVKWFKSVENLGSADSWAKTGIVCFLLFIGCLILFFFSRWVR LKKIGFYLGVLFIIMVVFANIFASDQKDEMINRKHAIVFAPTVTVKSSPDASGTDLFVLHEGTNVTVKSTLGEWSEIELE DGNVGWMPSKDIEKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28669; Mature: 28669
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMTINLRKVLFFLLTLCLIGSAYAQDTALKEAEVAYTKEDYAKAIELYEGILKSNGESA CCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE AVYYNLGNTYYKAGKIAPAILNYERCLLLDPGDSDARFNLQMARQKTIDKIEPVGDFFLV EEEEECCCCEECCCCCCHHHCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCHHHHHH KWFKSVENLGSADSWAKTGIVCFLLFIGCLILFFFSRWVRLKKIGFYLGVLFIIMVVFAN HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFASDQKDEMINRKHAIVFAPTVTVKSSPDASGTDLFVLHEGTNVTVKSTLGEWSEIELE HHCCCCHHHHHCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCEEEEE DGNVGWMPSKDIEKI CCCCCCCCCCHHCCC >Mature Secondary Structure MKMTINLRKVLFFLLTLCLIGSAYAQDTALKEAEVAYTKEDYAKAIELYEGILKSNGESA CCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE AVYYNLGNTYYKAGKIAPAILNYERCLLLDPGDSDARFNLQMARQKTIDKIEPVGDFFLV EEEEECCCCEECCCCCCHHHCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCHHHHHH KWFKSVENLGSADSWAKTGIVCFLLFIGCLILFFFSRWVRLKKIGFYLGVLFIIMVVFAN HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFASDQKDEMINRKHAIVFAPTVTVKSSPDASGTDLFVLHEGTNVTVKSTLGEWSEIELE HHCCCCHHHHHCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCEEEEE DGNVGWMPSKDIEKI CCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA