| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is 150007545
Identifier: 150007545
GI number: 150007545
Start: 1030425
End: 1031897
Strand: Direct
Name: 150007545
Synonym: BDI_0898
Alternate gene names: NA
Gene position: 1030425-1031897 (Clockwise)
Preceding gene: 150007544
Following gene: 150007547
Centisome position: 21.42
GC content: 58.04
Gene sequence:
>1473_bases ATGTCATTAACAACAGCAGAGGAGGAGAAGGTACGTGCGATTATCACGGCCTTCGATAACGGCAAGACGATCGACCAGCT GCCCTTGGCCGACACGAGCCAGCCCTCCAAGTATTTGATCGAGGGAGTGTCCAAGGAAACGGGCGAGTCGGTTAAGATCC CTTTCGCCGACGCGGTATCGATCGTGAACAAGCACGTCGCTATCCGTCGCTGGAAACGTGGTCAGGGCACGCCAGTCGGC GAGGCTTACGGTAATATCGATTTCCTGCGGGATCTTCCCTCCGTGATCGGTCTGGGCTGCTACCTCGTGTCCGTTGACCG TAGCCGGCGTAAGCTTGACCCGACGAACCACCGTCGTTTCGCCGACGGCAGTCCCGCTGCCTTGGACGGCACGATGGGCG ATTACCTGTGGTGCTGGAACGCCCACTACTACTCTTGGTGGGTTGACTCCACCTATTATTACGAGGCTGTCAGCCCGACC CCGATCGAGGGTCATTTGAACTATTACATCCCGGCCGGGGGTACGTCGGCCTTGGGAGCCGGCGTCATGGACCGTACGAG CGGCACGTTGGTCTCCGTCGTCAGTGACGATCCCCGTTATCGTGGCGGGAACAACGATGCGACGAGGGATGGCAAGCACA ACACGCAGCTAGGCATGGTTGCCACGAACATGAACGCCGCGGCTTTCGGCACGGCCGCCCGCAAGAAGGGTGAGGGCTGG GAATCCGGCTGGTTCGTCGCGAACAGCGTCGTCGGTTATCTCTACCGCCTTATCATGGGTACCCGTGATTGCCAGTCCGC GTTGAACCCGGTAAAGGACTCCAATGGCCTATATCAGGGCGGTACCGGTAAGGGGGTTACGGAATGGTCTTGGGATCCTT GGTCGAGCCATAACGGTGGTTATCCGATTATTCCGACGAGCGTAGGGATCGAGTTGGGGGACTCGGTCGGCGTGAGCGAC TACGCCGTGAAGGGCTCGGACGGTGGTACCGTCCACCAAGCGCACGTCCCTTGCTTCCTAGGCTTGAAGAACTTCTACGG GCATATCGGTCTGATCGAGCGTGGCGCTTTGATAAACAAGCTGTCCGACGGTAGCGGAGATTATTATGTCGCCCCGTCCC TTTACTCGGCTTTCAACATCAACTCGATCGAGGGTCTGATAAAGGCTGCGAAGGTTCCTAAGAACGATCCCAGTGGCTGG AAATATATCACTGAGCTCAGTATGCAGAATCTATGCTCCGCCCCGACTGTCGCCTCCGGCAGCTCCAGCACCTATTATTG CGACGGTTGGTATAACGACAACGCTATTTCCGGCCTTCGCTGTCCGTTCCGTCGTGGTCATGCGCACTACGGTGCTTTTG CCGGCTTAGCGTACCTCTATGGTAGCATTGCGGTCTCGCACGCTTACGTGGACTGGTCGTCGCCCCTCTGCTATTTTGCA GAGGACGTAAGCCCCGTGCCCGTGCAGTACTAG
Upstream 100 bases:
>100_bases TACTGCCCCGGTCATTCGTAAGGCCGGTAGCGTGATGAGATTTTTATCCGGTAGCCGGATACGAAAGGTATAATTGTCTA ACATTTTAATATACAGAATC
Downstream 100 bases:
>100_bases CGTTCATTGTGTTCGGGTGTCCATCGTGTCCATTAGGGTGCGAAGCGCCCGAGCACCCAAGGCACGTAAGTGCCGCATCT TAGTTCTTTGACATGTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MSLTTAEEEKVRAIITAFDNGKTIDQLPLADTSQPSKYLIEGVSKETGESVKIPFADAVSIVNKHVAIRRWKRGQGTPVG EAYGNIDFLRDLPSVIGLGCYLVSVDRSRRKLDPTNHRRFADGSPAALDGTMGDYLWCWNAHYYSWWVDSTYYYEAVSPT PIEGHLNYYIPAGGTSALGAGVMDRTSGTLVSVVSDDPRYRGGNNDATRDGKHNTQLGMVATNMNAAAFGTAARKKGEGW ESGWFVANSVVGYLYRLIMGTRDCQSALNPVKDSNGLYQGGTGKGVTEWSWDPWSSHNGGYPIIPTSVGIELGDSVGVSD YAVKGSDGGTVHQAHVPCFLGLKNFYGHIGLIERGALINKLSDGSGDYYVAPSLYSAFNINSIEGLIKAAKVPKNDPSGW KYITELSMQNLCSAPTVASGSSSTYYCDGWYNDNAISGLRCPFRRGHAHYGAFAGLAYLYGSIAVSHAYVDWSSPLCYFA EDVSPVPVQY
Sequences:
>Translated_490_residues MSLTTAEEEKVRAIITAFDNGKTIDQLPLADTSQPSKYLIEGVSKETGESVKIPFADAVSIVNKHVAIRRWKRGQGTPVG EAYGNIDFLRDLPSVIGLGCYLVSVDRSRRKLDPTNHRRFADGSPAALDGTMGDYLWCWNAHYYSWWVDSTYYYEAVSPT PIEGHLNYYIPAGGTSALGAGVMDRTSGTLVSVVSDDPRYRGGNNDATRDGKHNTQLGMVATNMNAAAFGTAARKKGEGW ESGWFVANSVVGYLYRLIMGTRDCQSALNPVKDSNGLYQGGTGKGVTEWSWDPWSSHNGGYPIIPTSVGIELGDSVGVSD YAVKGSDGGTVHQAHVPCFLGLKNFYGHIGLIERGALINKLSDGSGDYYVAPSLYSAFNINSIEGLIKAAKVPKNDPSGW KYITELSMQNLCSAPTVASGSSSTYYCDGWYNDNAISGLRCPFRRGHAHYGAFAGLAYLYGSIAVSHAYVDWSSPLCYFA EDVSPVPVQY >Mature_489_residues SLTTAEEEKVRAIITAFDNGKTIDQLPLADTSQPSKYLIEGVSKETGESVKIPFADAVSIVNKHVAIRRWKRGQGTPVGE AYGNIDFLRDLPSVIGLGCYLVSVDRSRRKLDPTNHRRFADGSPAALDGTMGDYLWCWNAHYYSWWVDSTYYYEAVSPTP IEGHLNYYIPAGGTSALGAGVMDRTSGTLVSVVSDDPRYRGGNNDATRDGKHNTQLGMVATNMNAAAFGTAARKKGEGWE SGWFVANSVVGYLYRLIMGTRDCQSALNPVKDSNGLYQGGTGKGVTEWSWDPWSSHNGGYPIIPTSVGIELGDSVGVSDY AVKGSDGGTVHQAHVPCFLGLKNFYGHIGLIERGALINKLSDGSGDYYVAPSLYSAFNINSIEGLIKAAKVPKNDPSGWK YITELSMQNLCSAPTVASGSSSTYYCDGWYNDNAISGLRCPFRRGHAHYGAFAGLAYLYGSIAVSHAYVDWSSPLCYFAE DVSPVPVQY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53086; Mature: 52954
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTTAEEEKVRAIITAFDNGKTIDQLPLADTSQPSKYLIEGVSKETGESVKIPFADAVS CCCCCCCHHHEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEECCHHHHHH IVNKHVAIRRWKRGQGTPVGEAYGNIDFLRDLPSVIGLGCYLVSVDRSRRKLDPTNHRRF HHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHCCEEEEEEECCHHCCCCCCCCCCC ADGSPAALDGTMGDYLWCWNAHYYSWWVDSTYYYEAVSPTPIEGHLNYYIPAGGTSALGA CCCCCCEECCCCCCEEEEECCCEEEEEECCEEEEEECCCCCCCCCEEEEEECCCCHHHCC GVMDRTSGTLVSVVSDDPRYRGGNNDATRDGKHNTQLGMVATNMNAAAFGTAARKKGEGW CCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHCHHHHHCCCCC ESGWFVANSVVGYLYRLIMGTRDCQSALNPVKDSNGLYQGGTGKGVTEWSWDPWSSHNGG CCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC YPIIPTSVGIELGDSVGVSDYAVKGSDGGTVHQAHVPCFLGLKNFYGHIGLIERGALINK CCEEECCCCEEECCCCCCCCEEEECCCCCEEEEECCCCEEEHHHHCCCCCEECCCHHHHH LSDGSGDYYVAPSLYSAFNINSIEGLIKAAKVPKNDPSGWKYITELSMQNLCSAPTVASG CCCCCCCEEECCCHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC SSSTYYCDGWYNDNAISGLRCPFRRGHAHYGAFAGLAYLYGSIAVSHAYVDWSSPLCYFA CCCEEEECCEECCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEE EDVSPVPVQY CCCCCCCCCC >Mature Secondary Structure SLTTAEEEKVRAIITAFDNGKTIDQLPLADTSQPSKYLIEGVSKETGESVKIPFADAVS CCCCCCHHHEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEECCHHHHHH IVNKHVAIRRWKRGQGTPVGEAYGNIDFLRDLPSVIGLGCYLVSVDRSRRKLDPTNHRRF HHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHCCEEEEEEECCHHCCCCCCCCCCC ADGSPAALDGTMGDYLWCWNAHYYSWWVDSTYYYEAVSPTPIEGHLNYYIPAGGTSALGA CCCCCCEECCCCCCEEEEECCCEEEEEECCEEEEEECCCCCCCCCEEEEEECCCCHHHCC GVMDRTSGTLVSVVSDDPRYRGGNNDATRDGKHNTQLGMVATNMNAAAFGTAARKKGEGW CCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHCHHHHHCCCCC ESGWFVANSVVGYLYRLIMGTRDCQSALNPVKDSNGLYQGGTGKGVTEWSWDPWSSHNGG CCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC YPIIPTSVGIELGDSVGVSDYAVKGSDGGTVHQAHVPCFLGLKNFYGHIGLIERGALINK CCEEECCCCEEECCCCCCCCEEEECCCCCEEEEECCCCEEEHHHHCCCCCEECCCHHHHH LSDGSGDYYVAPSLYSAFNINSIEGLIKAAKVPKNDPSGWKYITELSMQNLCSAPTVASG CCCCCCCEEECCCHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC SSSTYYCDGWYNDNAISGLRCPFRRGHAHYGAFAGLAYLYGSIAVSHAYVDWSSPLCYFA CCCEEEECCEECCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEE EDVSPVPVQY CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA