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The map label for this gene is ytfL [C]

Identifier: 150007486

GI number: 150007486

Start: 985310

End: 986584

Strand: Direct

Name: ytfL [C]

Synonym: BDI_0837

Alternate gene names: 150007486

Gene position: 985310-986584 (Clockwise)

Preceding gene: 150007483

Following gene: 150007494

Centisome position: 20.48

GC content: 46.43

Gene sequence:

>1275_bases
ATGGAAATAGTCATTATTATTGGCCTTATCTTACTGAATGGAATTCTTGCGATGTCGGAAATCGCCTTGGTCTCAGCCCG
GAAGGCTAGGTTGGAAACCGAAGCGAAACGTGGTAATAAATCTGCGGGCACTGCTTTGAAGCTGGCAAATGAGCCGGATA
AGTTTCTCTCAACCATCCAGATCGGAATTACCTTGATCGGTATCTTGACCGGTTTGTACTCTGGCGAGGCGTTAGCTCAT
AATTTCGCTGTTATAATAGCGCAAATACCGGCCCTAGAACCGTATGCGTTGGGGATCGCTAAAACGACGATCGTTATTAT
CGTGACGTATCTTACACTTATATTCGGAGAGTTGGTACCGAAGCGGATCGGCATGGGGTGTGCCGAGAAGGTCTCTATGT
TAGTTGCTAAACCCATGAATTTTCTTTCCTTGATATCCTCTCCTTTTGTTTGGCTACTTTCAAAGAGTACGGCGTTGGCT
GTGAAGATGACGGGCGTGGATACGAAAGAGGAAAATAGGGTAACAGAGGAAGAAATCAAGGCGATCGTGAAAGAGGGCTT
TGACGGTGGCGAGGTGCAAGAGGTAGAGCAGGACATCGTAGAGCGGGTCTTTAATCTGGGAGACCGTAACGTGGGTTCTA
TCATGACGCATCGTAGCGAGCTGGTTTGGCTGGATGTGACGGATAGTACGGAGAAGATTCGGGAGAAAGTGGAGGAGAAC
TTATTTAATATATATCCCGTGGCCTCGGAGAAGTTCGATAATATAGTAGGGGTCGTTTATCTGAAAGATTTGTTCGGAAG
GATCGACCAACCGGATTTCTCGATCAACCAAGTACTCCGCCCGGCACAGTTCGTTCCCGAGAACCAGAGCGTATATAACG
CCTTGGAATCTTTCAAGCAGACACACGTGAAATATGGACTCGTTACGGATGAGTTCGGAGGTATCCAAGGTATCGTAACC
TTGAAGGATATTATGGAAGGCTTAATCGGACAAGTACCGGAAGTCGGAGAGGAGTCCGAGATCATACAACGTGAGGATGG
TACTTGGTTGGTGGACGGCCAATATTCTTTCTATGATTTCTTGGAATATTTCGACATGGAGGATTTGTATGCCGAGCATG
ATTATAATACCTTGAGCGGCTTGATCCTAGAGATATTGGAACGTGTACCGAAGACGGGTGAGAAATTAAAGTGGCTGGAC
TTTGAGTTCGAGATCGTAGATATGGATGGCGCCCGGATCGATAAGGTTTTGGTCAAGTACTTGAAAAATGGGTAA

Upstream 100 bases:

>100_bases
GGTTTTTTAGTTAAATGTAAGCGCAGACACTTAGGTGTCTTGTTTTATATATTAAAGTATTTATATATCTTCGCAGCATA
ATCAAACTATAAATTAATTA

Downstream 100 bases:

>100_bases
AATGTCTTTTTAGAAGAGTACGCCGAGTGAGATACTCATCACGTTCGTTCGCTTGTCAATATTGATATCATAATTAATCT
CGGGAACCGGGTTGTTGACT

Product: putative hemolysins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MEIVIIIGLILLNGILAMSEIALVSARKARLETEAKRGNKSAGTALKLANEPDKFLSTIQIGITLIGILTGLYSGEALAH
NFAVIIAQIPALEPYALGIAKTTIVIIVTYLTLIFGELVPKRIGMGCAEKVSMLVAKPMNFLSLISSPFVWLLSKSTALA
VKMTGVDTKEENRVTEEEIKAIVKEGFDGGEVQEVEQDIVERVFNLGDRNVGSIMTHRSELVWLDVTDSTEKIREKVEEN
LFNIYPVASEKFDNIVGVVYLKDLFGRIDQPDFSINQVLRPAQFVPENQSVYNALESFKQTHVKYGLVTDEFGGIQGIVT
LKDIMEGLIGQVPEVGEESEIIQREDGTWLVDGQYSFYDFLEYFDMEDLYAEHDYNTLSGLILEILERVPKTGEKLKWLD
FEFEIVDMDGARIDKVLVKYLKNG

Sequences:

>Translated_424_residues
MEIVIIIGLILLNGILAMSEIALVSARKARLETEAKRGNKSAGTALKLANEPDKFLSTIQIGITLIGILTGLYSGEALAH
NFAVIIAQIPALEPYALGIAKTTIVIIVTYLTLIFGELVPKRIGMGCAEKVSMLVAKPMNFLSLISSPFVWLLSKSTALA
VKMTGVDTKEENRVTEEEIKAIVKEGFDGGEVQEVEQDIVERVFNLGDRNVGSIMTHRSELVWLDVTDSTEKIREKVEEN
LFNIYPVASEKFDNIVGVVYLKDLFGRIDQPDFSINQVLRPAQFVPENQSVYNALESFKQTHVKYGLVTDEFGGIQGIVT
LKDIMEGLIGQVPEVGEESEIIQREDGTWLVDGQYSFYDFLEYFDMEDLYAEHDYNTLSGLILEILERVPKTGEKLKWLD
FEFEIVDMDGARIDKVLVKYLKNG
>Mature_424_residues
MEIVIIIGLILLNGILAMSEIALVSARKARLETEAKRGNKSAGTALKLANEPDKFLSTIQIGITLIGILTGLYSGEALAH
NFAVIIAQIPALEPYALGIAKTTIVIIVTYLTLIFGELVPKRIGMGCAEKVSMLVAKPMNFLSLISSPFVWLLSKSTALA
VKMTGVDTKEENRVTEEEIKAIVKEGFDGGEVQEVEQDIVERVFNLGDRNVGSIMTHRSELVWLDVTDSTEKIREKVEEN
LFNIYPVASEKFDNIVGVVYLKDLFGRIDQPDFSINQVLRPAQFVPENQSVYNALESFKQTHVKYGLVTDEFGGIQGIVT
LKDIMEGLIGQVPEVGEESEIIQREDGTWLVDGQYSFYDFLEYFDMEDLYAEHDYNTLSGLILEILERVPKTGEKLKWLD
FEFEIVDMDGARIDKVLVKYLKNG

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=378, Percent_Identity=28.5714285714286, Blast_Score=172, Evalue=5e-43,
Organism=Escherichia coli, GI1790664, Length=419, Percent_Identity=29.5942720763723, Blast_Score=233, Evalue=2e-62,
Organism=Escherichia coli, GI145693175, Length=416, Percent_Identity=28.3653846153846, Blast_Score=159, Evalue=3e-40,
Organism=Escherichia coli, GI87082033, Length=276, Percent_Identity=28.9855072463768, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI1786879, Length=250, Percent_Identity=30.4, Blast_Score=116, Evalue=3e-27,
Organism=Escherichia coli, GI1788119, Length=234, Percent_Identity=29.9145299145299, Blast_Score=114, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 47343; Mature: 47343

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIVIIIGLILLNGILAMSEIALVSARKARLETEAKRGNKSAGTALKLANEPDKFLSTIQ
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHH
IGITLIGILTGLYSGEALAHNFAVIIAQIPALEPYALGIAKTTIVIIVTYLTLIFGELVP
HHHHHHHHHHHHHCCHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KRIGMGCAEKVSMLVAKPMNFLSLISSPFVWLLSKSTALAVKMTGVDTKEENRVTEEEIK
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCCHHCCCCHHHHH
AIVKEGFDGGEVQEVEQDIVERVFNLGDRNVGSIMTHRSELVWLDVTDSTEKIREKVEEN
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHH
LFNIYPVASEKFDNIVGVVYLKDLFGRIDQPDFSINQVLRPAQFVPENQSVYNALESFKQ
HHEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHCCCCCHHHHHHHHHHHH
THVKYGLVTDEFGGIQGIVTLKDIMEGLIGQVPEVGEESEIIQREDGTWLVDGQYSFYDF
HHHHCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCCEEECCCCHHHHH
LEYFDMEDLYAEHDYNTLSGLILEILERVPKTGEKLKWLDFEFEIVDMDGARIDKVLVKY
HHHHCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHH
LKNG
HHCC
>Mature Secondary Structure
MEIVIIIGLILLNGILAMSEIALVSARKARLETEAKRGNKSAGTALKLANEPDKFLSTIQ
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHH
IGITLIGILTGLYSGEALAHNFAVIIAQIPALEPYALGIAKTTIVIIVTYLTLIFGELVP
HHHHHHHHHHHHHCCHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KRIGMGCAEKVSMLVAKPMNFLSLISSPFVWLLSKSTALAVKMTGVDTKEENRVTEEEIK
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCCHHCCCCHHHHH
AIVKEGFDGGEVQEVEQDIVERVFNLGDRNVGSIMTHRSELVWLDVTDSTEKIREKVEEN
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHH
LFNIYPVASEKFDNIVGVVYLKDLFGRIDQPDFSINQVLRPAQFVPENQSVYNALESFKQ
HHEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHCCCCCHHHHHHHHHHHH
THVKYGLVTDEFGGIQGIVTLKDIMEGLIGQVPEVGEESEIIQREDGTWLVDGQYSFYDF
HHHHCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCCEEECCCCHHHHH
LEYFDMEDLYAEHDYNTLSGLILEILERVPKTGEKLKWLDFEFEIVDMDGARIDKVLVKY
HHHHCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHH
LKNG
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]