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The map label for this gene is araC [C]

Identifier: 150007437

GI number: 150007437

Start: 925663

End: 926541

Strand: Reverse

Name: araC [C]

Synonym: BDI_0788

Alternate gene names: 150007437

Gene position: 926541-925663 (Counterclockwise)

Preceding gene: 150007455

Following gene: 150007434

Centisome position: 19.26

GC content: 47.33

Gene sequence:

>879_bases
ATGAACGTAACAGATCTACCTCAAGCTTGTATCTCTCTTATCGAGAACGTACCCGGCATAGACTTCATCGACGAGGATTT
CGCCATATTCGATAACATCGACGATATTCCCTCGCTCGACCATCCGATGCGAATAGACGCCGTCGTATTCGCGCTTTGCA
CGAAAGGCTTCATGCGTATACGGATCAATATGGAGGAATATGTCGTAGGGGAAAACCATCTCGTATTGTCCCTGCCCGAT
CAGATCATCCAACACGTGGAACGTAGCGAGGACGTGGCCGGGATCTTCATCGTCATCTCCAAGAATTTCATGGAGGAGAT
CATTCCTCATATACAGAATACCTTGCCGGCGTTCTTCTACATCAAGGAGCATCCGGTCACTGAGTTGAATGCCGAGGAGA
TAGGTTGTATCAAGGAATATCATTCTTTCCTCTGGAAGAAAGTGAAAGCGAAAAGGCATCCTTACCGGAAAGAGATTGCC
CAGAGCTTATTGTTGGCGGTATTCCACGAGGTTTACGGCATGTTTAAGAATCATATGCCGATCGAGGTGAAGAAGAGCCG
GCAAGAGGAGTTGTTCGCAGCGTTCATACAAACGCTCGCCTTACATCATAAGCAGGAACGGTCGGTAGCTTTCTACGCCG
GGAAATTATGTGTCACTCCCAAATATTTATCTCTTTTGGTAAAGAACGTCAGCAACCGTACGGCCGGGGAATGGATCGAT
AATTACGTTGTCTTGGAGGCGAAGGCGTTATTATCCTCCTCCACCCTTTCCATCCAAGAGATATCAGACCGGCTAAACTT
CACCAACCAATCCTTCTTCGGTAAATACTTCAAGCAACACGTCGGGATATCGCCTACGGAGTATCGGAAGAAATGGTAA

Upstream 100 bases:

>100_bases
CAAAGAAGTTCCGTTTTGCAACCAAATTGTCCTATTTGACACATTTCAATTGGATTATTCTATTATTTCACTAATTTTAT
CGCCCAAACAAGAATAAATT

Downstream 100 bases:

>100_bases
AATGAGGGCGAGCAGTTCCCACCCCTATTCTAATTATCCTCCGATCAACGCAGTTATCCCGCAGGAGGCGAATTGATCGA
TACACCTTTGCAGGACTGCT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; AraC Family Transcriptional Regulator; AraC-Type Transcription Regulator; Helix-Turn-Helix Domain-Containing Protein; Phosphomethylpyrimidine Kinase; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcription Regulator; AraC/XylS Family Transcriptional Regulator; AraC-Family Regulatory Protein; Transcription Regulator AraC-Type; Bacterial Regulatory Helix-Turn-Helix Protein; AraC-Type Transcriptional Regulator; Transcriptional Regulator Arac Family; AraC Family Regulatory Helix-Turn-Helix Protein; AraC Family Regulatory Protein; AraC-Family Transcriptional Regulator

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MNVTDLPQACISLIENVPGIDFIDEDFAIFDNIDDIPSLDHPMRIDAVVFALCTKGFMRIRINMEEYVVGENHLVLSLPD
QIIQHVERSEDVAGIFIVISKNFMEEIIPHIQNTLPAFFYIKEHPVTELNAEEIGCIKEYHSFLWKKVKAKRHPYRKEIA
QSLLLAVFHEVYGMFKNHMPIEVKKSRQEELFAAFIQTLALHHKQERSVAFYAGKLCVTPKYLSLLVKNVSNRTAGEWID
NYVVLEAKALLSSSTLSIQEISDRLNFTNQSFFGKYFKQHVGISPTEYRKKW

Sequences:

>Translated_292_residues
MNVTDLPQACISLIENVPGIDFIDEDFAIFDNIDDIPSLDHPMRIDAVVFALCTKGFMRIRINMEEYVVGENHLVLSLPD
QIIQHVERSEDVAGIFIVISKNFMEEIIPHIQNTLPAFFYIKEHPVTELNAEEIGCIKEYHSFLWKKVKAKRHPYRKEIA
QSLLLAVFHEVYGMFKNHMPIEVKKSRQEELFAAFIQTLALHHKQERSVAFYAGKLCVTPKYLSLLVKNVSNRTAGEWID
NYVVLEAKALLSSSTLSIQEISDRLNFTNQSFFGKYFKQHVGISPTEYRKKW
>Mature_292_residues
MNVTDLPQACISLIENVPGIDFIDEDFAIFDNIDDIPSLDHPMRIDAVVFALCTKGFMRIRINMEEYVVGENHLVLSLPD
QIIQHVERSEDVAGIFIVISKNFMEEIIPHIQNTLPAFFYIKEHPVTELNAEEIGCIKEYHSFLWKKVKAKRHPYRKEIA
QSLLLAVFHEVYGMFKNHMPIEVKKSRQEELFAAFIQTLALHHKQERSVAFYAGKLCVTPKYLSLLVKNVSNRTAGEWID
NYVVLEAKALLSSSTLSIQEISDRLNFTNQSFFGKYFKQHVGISPTEYRKKW

Specific function: This Protein Controls The Expression Of At Least Six Genes That Are Involved In The Transport And Catabolism Of L-Arabinose. It Regulates Initiation Of Transcription Of The Arabad Operon And It Also Controls Its Own Synthesis. The L- Arabinose Operon Dis

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33765; Mature: 33765

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVTDLPQACISLIENVPGIDFIDEDFAIFDNIDDIPSLDHPMRIDAVVFALCTKGFMRI
CCCCHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEE
RINMEEYVVGENHLVLSLPDQIIQHVERSEDVAGIFIVISKNFMEEIIPHIQNTLPAFFY
EEEHHHHEECCCCEEEECHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEE
IKEHPVTELNAEEIGCIKEYHSFLWKKVKAKRHPYRKEIAQSLLLAVFHEVYGMFKNHMP
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
IEVKKSRQEELFAAFIQTLALHHKQERSVAFYAGKLCVTPKYLSLLVKNVSNRTAGEWID
CEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCHHHHHHHHHHHCCCHHHHHHH
NYVVLEAKALLSSSTLSIQEISDRLNFTNQSFFGKYFKQHVGISPTEYRKKW
CCCEEEHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHCCC
>Mature Secondary Structure
MNVTDLPQACISLIENVPGIDFIDEDFAIFDNIDDIPSLDHPMRIDAVVFALCTKGFMRI
CCCCHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEE
RINMEEYVVGENHLVLSLPDQIIQHVERSEDVAGIFIVISKNFMEEIIPHIQNTLPAFFY
EEEHHHHEECCCCEEEECHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEE
IKEHPVTELNAEEIGCIKEYHSFLWKKVKAKRHPYRKEIAQSLLLAVFHEVYGMFKNHMP
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
IEVKKSRQEELFAAFIQTLALHHKQERSVAFYAGKLCVTPKYLSLLVKNVSNRTAGEWID
CEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCCHHHHHHHHHHHCCCHHHHHHH
NYVVLEAKALLSSSTLSIQEISDRLNFTNQSFFGKYFKQHVGISPTEYRKKW
CCCEEEHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA