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The map label for this gene is ychE [C]

Identifier: 150007418

GI number: 150007418

Start: 900812

End: 901423

Strand: Reverse

Name: ychE [C]

Synonym: BDI_0769

Alternate gene names: 150007418

Gene position: 901423-900812 (Counterclockwise)

Preceding gene: 150007420

Following gene: 150007416

Centisome position: 18.74

GC content: 42.32

Gene sequence:

>612_bases
ATGTTCACAAATTTCAATTTCCAGCAAATACTTAGCGCCTTTATCGTATTATTCGCTGTTATCGATATAATCGGAGCTAT
TCCCATCATCATAGACCTAAAGGATAAAGGCAAGGATGTCAATGCGTTGAAGGCAACCCTAATCTCTTTTCTATTGTTAT
TAGGGTTCTTCTACGCCGGGGATATATTGCTCAGGCTTTTCCATGTGGACATCGAGTCGTTTGCCGTGGCCGGCGCTTTT
GTGATCTTCCTCCTATCTTTAGAGATGATTCTCGACATAGAGATTTTCAAGAATCAAGGGCCAATCAAGGAGGCTACGTT
GGTGCCGCTGGTATTCCCGTTGCTAGCCGGAGCGGGATCGTTCACCACTTTATTATCGCTCCGTGCGGAATATGCCAGCG
TGAATATTATCGTGGCGTTAATATTGAATATGCTATGGGTATATTTCGTGGTTCGTATGACACGGAAGGTGGAAAGGGTT
TTAGGAAAAGGCGGTATTTACTTGATCCGTAAATTCTTCGGTATCATTTTATTGGCGATATCCGTAAAATTATTCATGAG
CAATATCACCCTGCTAATGGAACAGATAGAAGCGAGTACGAAAGCAATATAA

Upstream 100 bases:

>100_bases
TGCTAAAATTAGTTACACACACCAATAATTTCGTCATATTGACCAATTCAAAGAAAATATGTATCTTTACGAGGATTAAA
AAACACAGGAGGATAACATC

Downstream 100 bases:

>100_bases
GATTTCCTTTAAAAGAGCATCCAGTTTCATCCTATTGAAACAAAGAGTTCATTAGGATGAAACTACAAGGCATCTATTAT
TTTCCGAAACGAGATGTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MFTNFNFQQILSAFIVLFAVIDIIGAIPIIIDLKDKGKDVNALKATLISFLLLLGFFYAGDILLRLFHVDIESFAVAGAF
VIFLLSLEMILDIEIFKNQGPIKEATLVPLVFPLLAGAGSFTTLLSLRAEYASVNIIVALILNMLWVYFVVRMTRKVERV
LGKGGIYLIRKFFGIILLAISVKLFMSNITLLMEQIEASTKAI

Sequences:

>Translated_203_residues
MFTNFNFQQILSAFIVLFAVIDIIGAIPIIIDLKDKGKDVNALKATLISFLLLLGFFYAGDILLRLFHVDIESFAVAGAF
VIFLLSLEMILDIEIFKNQGPIKEATLVPLVFPLLAGAGSFTTLLSLRAEYASVNIIVALILNMLWVYFVVRMTRKVERV
LGKGGIYLIRKFFGIILLAISVKLFMSNITLLMEQIEASTKAI
>Mature_203_residues
MFTNFNFQQILSAFIVLFAVIDIIGAIPIIIDLKDKGKDVNALKATLISFLLLLGFFYAGDILLRLFHVDIESFAVAGAF
VIFLLSLEMILDIEIFKNQGPIKEATLVPLVFPLLAGAGSFTTLLSLRAEYASVNIIVALILNMLWVYFVVRMTRKVERV
LGKGGIYLIRKFFGIILLAISVKLFMSNITLLMEQIEASTKAI

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=203, Percent_Identity=27.5862068965517, Blast_Score=76, Evalue=1e-15,
Organism=Escherichia coli, GI1789842, Length=195, Percent_Identity=25.6410256410256, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 22596; Mature: 22596

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTNFNFQQILSAFIVLFAVIDIIGAIPIIIDLKDKGKDVNALKATLISFLLLLGFFYAG
CCCCCCHHHHHHHHHHHHHHHHHHCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
DILLRLFHVDIESFAVAGAFVIFLLSLEMILDIEIFKNQGPIKEATLVPLVFPLLAGAGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCH
FTTLLSLRAEYASVNIIVALILNMLWVYFVVRMTRKVERVLGKGGIYLIRKFFGIILLAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
SVKLFMSNITLLMEQIEASTKAI
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFTNFNFQQILSAFIVLFAVIDIIGAIPIIIDLKDKGKDVNALKATLISFLLLLGFFYAG
CCCCCCHHHHHHHHHHHHHHHHHHCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
DILLRLFHVDIESFAVAGAFVIFLLSLEMILDIEIFKNQGPIKEATLVPLVFPLLAGAGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCH
FTTLLSLRAEYASVNIIVALILNMLWVYFVVRMTRKVERVLGKGGIYLIRKFFGIILLAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
SVKLFMSNITLLMEQIEASTKAI
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]