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The map label for this gene is emrB [C]

Identifier: 150007332

GI number: 150007332

Start: 810743

End: 812347

Strand: Reverse

Name: emrB [C]

Synonym: BDI_0682

Alternate gene names: 150007332

Gene position: 812347-810743 (Counterclockwise)

Preceding gene: 150007333

Following gene: 150007331

Centisome position: 16.88

GC content: 44.05

Gene sequence:

>1605_bases
ATGATCACGATGAAAGAGCTTGGGGCACCGATCCGCCAATGGGTGCCGGACTGGTTAGGATTGATTTGCATCTTCATCGT
TATCCTTCCGGTTACGATGCTAAACGGTTCGTACACCGGCAGTATGCTGGAGGTATCAAACACGCTAGGCACGAACACCG
AGGATATAACCATGGGATATTACGCGGCAGCGGCGGGAATGGCGGTATCCTATCCGATTATTCCGAAGATATTAGAAGCC
TTCTCTATAAAATTCTTATTGTTAGCGGATTTAGTCGCCCAGTTCTTCTTAAGCTGGATCTGTGCCCGCTCCCAGAACGC
CGACATATTGATCGTCTGTAGTTTCGCGATCGGTTTCCTGAAAGGGTTTCTCATGCTGTGGTTTATCCGGTACGCACAAA
AGATATTCAGCCCTAAAAATATACGTAGCCAATTCTATTCCTACTTCTATCCTTTTGTTTTCGGAGGGGGACAAGCGTCC
ATGCTTGTTACCGCACAGTTAGCCTACCATTACGACTGGAAATATATGTATTACTTCATGATGCTAATGATTTTATTGGC
CATAGTAATGGTAATCATCTGCTTCCGCCATAACCGGCCGATCAAGTCCATCCCCTTGGCCGATCTACACATCCGGGAAA
TGTTCATCATATCCACCGGATTGTTAATGCTTATGTATGTCATTAATTACGGGAAAGTACTCGACTGGATGGCATCCCCC
AAGATTTGCCTTTATATCATGATCGCCCCGATATTGATCGCTTTATTTATTTGGTATCAATATCATTCGGAACGTCCGTA
CGTGAATCTGGCGCCTTTATACCAGCCGAAAGCCATTATCGGTTATTTCTATATGATGCTTGTCATGTTTTTCAGTACTT
CGACTACCTTGTTGACCAGCTACCTGACCAGTATCTTAAAGGTAGACAGTACCCATACCTATTCCCTTTATACTTATTTG
CTTCCGGGATATGTCTTGGGGGCGTTCATCTGTTTTTGGTGGTTCCGGTGGCAACGTTGGCGGTTTCGTTTCTTGATAGC
GGGAGGAATGAGTTGTTTCGTCCTGTTCTTCGGGAGCCTTTATTTCGGGATCTCACCGGATAGCAGATACGAGATGCTCT
ACTTTCCTATATTCCTCAGGGGATTGGGCATGATGATTCTAATCATAGCTTTCGCCTTATTTGCCGTGGAAGATTTAAAT
CCTAAATATTTATTGTCAAACGCTTTCTTTCTCATCATTTTCCGTTCGGTACTATCCCCTATCATGGCGACTTCTTTTTA
CAGTAATATACTATATCGCTTGGAACAAAAATATATGTATTCCTTATCAGAAACCGTTACGCTGGCCGATCCTCTAGCCG
CCTCACGCTATAATCAGGCGCTTGGCAACGCCTTGACCCAAGGGCATCCCTACGACGAGGCAGCGCAAATGGCTACCAAT
ACACTCTATAATACGTTACAGCAACAAAGCTTATTATTGGCGTTAAAAGAGATACTGGGGTATTTATTAGTCATCTCCTT
ATTCATAGCGATCGTATCTCGTTTTATCCCATTCCATAAAACCATCCGTGTTACATTCGCCAAGACAGGAGATGATATGG
TTTGA

Upstream 100 bases:

>100_bases
AACAACGTATCCCGGTACGGATAGACTTGGAAAATCTATCGCAAGAAGATACGCAATACTTAAGAGCAGGCATGATGGTT
GAAACAGAAGCCTTACGCAA

Downstream 100 bases:

>100_bases
TCAAACTATGCCCGGCTGCAAATCTATCAGCCGGCATCTGCCTTTTTGTCATTTATAGTTTATCCGAAACATTTTGGCAT
TCGTTTTGTATAGGAATAGG

Product: putative transport protein

Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]

Alternate protein names: None

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MITMKELGAPIRQWVPDWLGLICIFIVILPVTMLNGSYTGSMLEVSNTLGTNTEDITMGYYAAAAGMAVSYPIIPKILEA
FSIKFLLLADLVAQFFLSWICARSQNADILIVCSFAIGFLKGFLMLWFIRYAQKIFSPKNIRSQFYSYFYPFVFGGGQAS
MLVTAQLAYHYDWKYMYYFMMLMILLAIVMVIICFRHNRPIKSIPLADLHIREMFIISTGLLMLMYVINYGKVLDWMASP
KICLYIMIAPILIALFIWYQYHSERPYVNLAPLYQPKAIIGYFYMMLVMFFSTSTTLLTSYLTSILKVDSTHTYSLYTYL
LPGYVLGAFICFWWFRWQRWRFRFLIAGGMSCFVLFFGSLYFGISPDSRYEMLYFPIFLRGLGMMILIIAFALFAVEDLN
PKYLLSNAFFLIIFRSVLSPIMATSFYSNILYRLEQKYMYSLSETVTLADPLAASRYNQALGNALTQGHPYDEAAQMATN
TLYNTLQQQSLLLALKEILGYLLVISLFIAIVSRFIPFHKTIRVTFAKTGDDMV

Sequences:

>Translated_534_residues
MITMKELGAPIRQWVPDWLGLICIFIVILPVTMLNGSYTGSMLEVSNTLGTNTEDITMGYYAAAAGMAVSYPIIPKILEA
FSIKFLLLADLVAQFFLSWICARSQNADILIVCSFAIGFLKGFLMLWFIRYAQKIFSPKNIRSQFYSYFYPFVFGGGQAS
MLVTAQLAYHYDWKYMYYFMMLMILLAIVMVIICFRHNRPIKSIPLADLHIREMFIISTGLLMLMYVINYGKVLDWMASP
KICLYIMIAPILIALFIWYQYHSERPYVNLAPLYQPKAIIGYFYMMLVMFFSTSTTLLTSYLTSILKVDSTHTYSLYTYL
LPGYVLGAFICFWWFRWQRWRFRFLIAGGMSCFVLFFGSLYFGISPDSRYEMLYFPIFLRGLGMMILIIAFALFAVEDLN
PKYLLSNAFFLIIFRSVLSPIMATSFYSNILYRLEQKYMYSLSETVTLADPLAASRYNQALGNALTQGHPYDEAAQMATN
TLYNTLQQQSLLLALKEILGYLLVISLFIAIVSRFIPFHKTIRVTFAKTGDDMV
>Mature_534_residues
MITMKELGAPIRQWVPDWLGLICIFIVILPVTMLNGSYTGSMLEVSNTLGTNTEDITMGYYAAAAGMAVSYPIIPKILEA
FSIKFLLLADLVAQFFLSWICARSQNADILIVCSFAIGFLKGFLMLWFIRYAQKIFSPKNIRSQFYSYFYPFVFGGGQAS
MLVTAQLAYHYDWKYMYYFMMLMILLAIVMVIICFRHNRPIKSIPLADLHIREMFIISTGLLMLMYVINYGKVLDWMASP
KICLYIMIAPILIALFIWYQYHSERPYVNLAPLYQPKAIIGYFYMMLVMFFSTSTTLLTSYLTSILKVDSTHTYSLYTYL
LPGYVLGAFICFWWFRWQRWRFRFLIAGGMSCFVLFFGSLYFGISPDSRYEMLYFPIFLRGLGMMILIIAFALFAVEDLN
PKYLLSNAFFLIIFRSVLSPIMATSFYSNILYRLEQKYMYSLSETVTLADPLAASRYNQALGNALTQGHPYDEAAQMATN
TLYNTLQQQSLLLALKEILGYLLVISLFIAIVSRFIPFHKTIRVTFAKTGDDMV

Specific function: Translocase That Confers Resistance To Substances Of High Hydrophobicity. [C]

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61575; Mature: 61575

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITMKELGAPIRQWVPDWLGLICIFIVILPVTMLNGSYTGSMLEVSNTLGTNTEDITMGY
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHHCCCCCCHHHHHH
YAAAAGMAVSYPIIPKILEAFSIKFLLLADLVAQFFLSWICARSQNADILIVCSFAIGFL
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHH
KGFLMLWFIRYAQKIFSPKNIRSQFYSYFYPFVFGGGQASMLVTAQLAYHYDWKYMYYFM
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHEEEHHHHHCCHHHHHHHH
MLMILLAIVMVIICFRHNRPIKSIPLADLHIREMFIISTGLLMLMYVINYGKVLDWMASP
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KICLYIMIAPILIALFIWYQYHSERPYVNLAPLYQPKAIIGYFYMMLVMFFSTSTTLLTS
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
YLTSILKVDSTHTYSLYTYLLPGYVLGAFICFWWFRWQRWRFRFLIAGGMSCFVLFFGSL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHH
YFGISPDSRYEMLYFPIFLRGLGMMILIIAFALFAVEDLNPKYLLSNAFFLIIFRSVLSP
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
IMATSFYSNILYRLEQKYMYSLSETVTLADPLAASRYNQALGNALTQGHPYDEAAQMATN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
TLYNTLQQQSLLLALKEILGYLLVISLFIAIVSRFIPFHKTIRVTFAKTGDDMV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MITMKELGAPIRQWVPDWLGLICIFIVILPVTMLNGSYTGSMLEVSNTLGTNTEDITMGY
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHHCCCCCCHHHHHH
YAAAAGMAVSYPIIPKILEAFSIKFLLLADLVAQFFLSWICARSQNADILIVCSFAIGFL
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHH
KGFLMLWFIRYAQKIFSPKNIRSQFYSYFYPFVFGGGQASMLVTAQLAYHYDWKYMYYFM
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHEEEHHHHHCCHHHHHHHH
MLMILLAIVMVIICFRHNRPIKSIPLADLHIREMFIISTGLLMLMYVINYGKVLDWMASP
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KICLYIMIAPILIALFIWYQYHSERPYVNLAPLYQPKAIIGYFYMMLVMFFSTSTTLLTS
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
YLTSILKVDSTHTYSLYTYLLPGYVLGAFICFWWFRWQRWRFRFLIAGGMSCFVLFFGSL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHH
YFGISPDSRYEMLYFPIFLRGLGMMILIIAFALFAVEDLNPKYLLSNAFFLIIFRSVLSP
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
IMATSFYSNILYRLEQKYMYSLSETVTLADPLAASRYNQALGNALTQGHPYDEAAQMATN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
TLYNTLQQQSLLLALKEILGYLLVISLFIAIVSRFIPFHKTIRVTFAKTGDDMV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA