Click here to switch to the map view.

The map label for this gene is yqhD [H]

Identifier: 150007240

GI number: 150007240

Start: 685530

End: 686672

Strand: Reverse

Name: yqhD [H]

Synonym: BDI_0585

Alternate gene names: 150007240

Gene position: 686672-685530 (Counterclockwise)

Preceding gene: 150007241

Following gene: 150007232

Centisome position: 14.27

GC content: 52.23

Gene sequence:

>1143_bases
ATGAATAACTTCACTTTTCACAACCCAACCCGTTTATTATTCGGTAAGGGCATGATTGAGAAACTGAGTACGGCCATCCC
GATGGTGCATCGCATCATGATCACCTTCGGAGGAGGTAGCGTAAAGCAAAACGGTGTGTACGACCAAGTGATCAAGGCGC
TAAAGGATCGTGACTATATCGAGTTCTGGGGCATCGAGCCTAATCCCACCATCGAGACCTTGCGAGAAGCTATCCAGATA
GCGAAAGGCAAGCAGGTGGATTTCCTATTGGCGGTAGGCGGTGGCTCCGTCATAGACGGGACGAAGCTAATCTCCGCCGG
CATCCAGTACGACGGTGATCCTTGGGAATTGGTACAGAAAGGGTATTACTATCATACCGTGCCCATGGGTACCGTACTGA
CCCTGCCCGCCACGGGTTCCGAGATGAATAGCGGGGCCGTGATCTCCCGGAAAGAGACGCAAGAGAAATTCCCGTTCTAC
AGTAATTTCCCCGTGTTCTCGATCTTGGACCCGGAGACGACCTTCAGCCTGCCCCCGTATCAAGTGGCTTGCGGTATCGC
CGATACCTTCGTCCACGTGATGGAGCAATATATGACTACGACCGACCAATCCCGCTTGATGGATCATTGGGCGGAAAGTA
TTTTAAGTACCTTGGTTGAGATCGCCCCGAAGATCAAGGAAGATCCGAGGAATTACGACCTGATGGCAGATTTCATGCTA
TCCGCCACGATGGGCTTGAACGGCTTTATCGCTATGGGCGTAACGCAGGACTGGGCTACCCATATGATCGGACACGAGCT
AACCGCCCTTCACGGATTGACGCATGGAGCGACTCTAGCGATCGTCTTCCCCGGAACCTTACGCACCCTACGCAAGCAGA
AAGAGGGCAAGATACTGCAATACGGCGAACGGGTATGGGGTATCAATAGTGGAACAACAGAGGAACGGGTAAGCCAAGCC
ATCGAGAAGACTGAGCAATTTTTCCAAAGCCTCGGTTTATCTACCCGCCTCAGCCAAGAGAAGATCGGCGATACGACAAT
CACCGAGATCGAGAATCGCTTCAATGAACGAAACGCCGCCTTCGGGGAGGCGAAGAATGTAACGGGTAGCGTGGCACGGG
AAATATTGGAGAGCTGTAAATAA

Upstream 100 bases:

>100_bases
GAGCGAAGCTACTCCCGCCGAAGCGGTCGATAAGTTACTGGAAGCCCTAAAACAATAGGAACCCTATTCATGTTTACATA
TAAAAACAGTAAATAGTCCT

Downstream 100 bases:

>100_bases
CGTACAACTTGTAGAGACGGGGCGTGCCCCGTCTCTACAAATGGGTATAGGTTTTATCTTAACAGGACTACTACCCGGAT
CGGGCCATGCGCCCCGAATA

Product: putative alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MNNFTFHNPTRLLFGKGMIEKLSTAIPMVHRIMITFGGGSVKQNGVYDQVIKALKDRDYIEFWGIEPNPTIETLREAIQI
AKGKQVDFLLAVGGGSVIDGTKLISAGIQYDGDPWELVQKGYYYHTVPMGTVLTLPATGSEMNSGAVISRKETQEKFPFY
SNFPVFSILDPETTFSLPPYQVACGIADTFVHVMEQYMTTTDQSRLMDHWAESILSTLVEIAPKIKEDPRNYDLMADFML
SATMGLNGFIAMGVTQDWATHMIGHELTALHGLTHGATLAIVFPGTLRTLRKQKEGKILQYGERVWGINSGTTEERVSQA
IEKTEQFFQSLGLSTRLSQEKIGDTTITEIENRFNERNAAFGEAKNVTGSVAREILESCK

Sequences:

>Translated_380_residues
MNNFTFHNPTRLLFGKGMIEKLSTAIPMVHRIMITFGGGSVKQNGVYDQVIKALKDRDYIEFWGIEPNPTIETLREAIQI
AKGKQVDFLLAVGGGSVIDGTKLISAGIQYDGDPWELVQKGYYYHTVPMGTVLTLPATGSEMNSGAVISRKETQEKFPFY
SNFPVFSILDPETTFSLPPYQVACGIADTFVHVMEQYMTTTDQSRLMDHWAESILSTLVEIAPKIKEDPRNYDLMADFML
SATMGLNGFIAMGVTQDWATHMIGHELTALHGLTHGATLAIVFPGTLRTLRKQKEGKILQYGERVWGINSGTTEERVSQA
IEKTEQFFQSLGLSTRLSQEKIGDTTITEIENRFNERNAAFGEAKNVTGSVAREILESCK
>Mature_380_residues
MNNFTFHNPTRLLFGKGMIEKLSTAIPMVHRIMITFGGGSVKQNGVYDQVIKALKDRDYIEFWGIEPNPTIETLREAIQI
AKGKQVDFLLAVGGGSVIDGTKLISAGIQYDGDPWELVQKGYYYHTVPMGTVLTLPATGSEMNSGAVISRKETQEKFPFY
SNFPVFSILDPETTFSLPPYQVACGIADTFVHVMEQYMTTTDQSRLMDHWAESILSTLVEIAPKIKEDPRNYDLMADFML
SATMGLNGFIAMGVTQDWATHMIGHELTALHGLTHGATLAIVFPGTLRTLRKQKEGKILQYGERVWGINSGTTEERVSQA
IEKTEQFFQSLGLSTRLSQEKIGDTTITEIENRFNERNAAFGEAKNVTGSVAREILESCK

Specific function: NADP-dependent ADH activity [H]

COG id: COG1979

COG function: function code C; Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1789386, Length=387, Percent_Identity=50.9043927648579, Blast_Score=392, Evalue=1e-110,
Organism=Escherichia coli, GI48994951, Length=249, Percent_Identity=25.7028112449799, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1787493, Length=310, Percent_Identity=24.5161290322581, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789163, Length=285, Percent_Identity=24.2105263157895, Blast_Score=66, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6321181, Length=294, Percent_Identity=26.1904761904762, Blast_Score=79, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001670
- InterPro:   IPR018211 [H]

Pfam domain/function: PF00465 Fe-ADH [H]

EC number: 1.1.-.- [C]

Molecular weight: Translated: 42284; Mature: 42284

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS00913 ADH_IRON_1 ; PS00060 ADH_IRON_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNFTFHNPTRLLFGKGMIEKLSTAIPMVHRIMITFGGGSVKQNGVYDQVIKALKDRDYI
CCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHCCCCCE
EFWGIEPNPTIETLREAIQIAKGKQVDFLLAVGGGSVIDGTKLISAGIQYDGDPWELVQK
EEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEECCHHHHHCCCCCCCCHHHHHHC
GYYYHTVPMGTVLTLPATGSEMNSGAVISRKETQEKFPFYSNFPVFSILDPETTFSLPPY
CCEEEEECCCEEEEECCCCCCCCCCCEEECHHHHHHCCCCCCCCEEEEECCCCCCCCCCH
QVACGIADTFVHVMEQYMTTTDQSRLMDHWAESILSTLVEIAPKIKEDPRNYDLMADFML
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SATMGLNGFIAMGVTQDWATHMIGHELTALHGLTHGATLAIVFPGTLRTLRKQKEGKILQ
HHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCHHH
YGERVWGINSGTTEERVSQAIEKTEQFFQSLGLSTRLSQEKIGDTTITEIENRFNERNAA
HCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCHHHCCCHHHHHHHHHHHHHCCC
FGEAKNVTGSVAREILESCK
CCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNNFTFHNPTRLLFGKGMIEKLSTAIPMVHRIMITFGGGSVKQNGVYDQVIKALKDRDYI
CCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHCCCCCE
EFWGIEPNPTIETLREAIQIAKGKQVDFLLAVGGGSVIDGTKLISAGIQYDGDPWELVQK
EEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEECCHHHHHCCCCCCCCHHHHHHC
GYYYHTVPMGTVLTLPATGSEMNSGAVISRKETQEKFPFYSNFPVFSILDPETTFSLPPY
CCEEEEECCCEEEEECCCCCCCCCCCEEECHHHHHHCCCCCCCCEEEEECCCCCCCCCCH
QVACGIADTFVHVMEQYMTTTDQSRLMDHWAESILSTLVEIAPKIKEDPRNYDLMADFML
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SATMGLNGFIAMGVTQDWATHMIGHELTALHGLTHGATLAIVFPGTLRTLRKQKEGKILQ
HHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCHHH
YGERVWGINSGTTEERVSQAIEKTEQFFQSLGLSTRLSQEKIGDTTITEIENRFNERNAA
HCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCHHHCCCHHHHHHHHHHHHHCCC
FGEAKNVTGSVAREILESCK
CCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]