| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is cdr [H]
Identifier: 150007196
GI number: 150007196
Start: 641712
End: 644180
Strand: Reverse
Name: cdr [H]
Synonym: BDI_0541
Alternate gene names: 150007196
Gene position: 644180-641712 (Counterclockwise)
Preceding gene: 150007197
Following gene: 150007189
Centisome position: 13.39
GC content: 49.53
Gene sequence:
>2469_bases ATGAAGTATTTGATTATTGGAGGTGTAGCCGGTGGAGCTACCGTAGCAGCCCGGCTGCGTAGAATGGACGAGAAAGCGGA AATCATCCTTTTCGAACGTGGAAAATATGTTTCTTACGCAAACTGTGGATTACCTTATTATATAGGAGACACGATCAACG ACCGGAATAAATTATTCGTACAAACCGTGAAAGGCTTCACGGATCGATTCCGCATCGATATACGTACGGAGCAGGAAGTG ACCCGAATCCTTCCCGAATCCAAGCAAGTGGAGGTAAAGAAACTCGGCACAGGAGAAACCTACACGGAGACTTACGATAA ACTAGTGCTCTCTCCCGGTGCGGAGCCTTTGCGTCCACGCATCGAAGGAATCGAGAGTAAAAAGATATTCACGTTACGTA ACGTGCCGGATACGGACACGATCAAGAATTACGTGAACACAGAAAAGCCCCGTACCGCCGTTGTTGTAGGGGGTGGTTTC ATCGGCTTGGAGATGGCGGAGAATTTGCATGAGCTGGGTATCCACGTCACTGTCGTGGAAATGGCTAACCAAGTGATGGC ACCCCTCGACTATTCCATGGCCGCTATCGTACATCAGCAATTGATCGGCAAGCAGGTAGGCTTGATGCTGGAAGATGGCG TATCTCGTTTCGAGGAGACTTCCGGAGGCGTGACCGTTCATTTGAAAAGTGGGAAGCAGATCCCGGCGGATATGGTTTTA TTGAGTATCGGTGTCCGTCCGGAAACCCGATTGGCCAAAGAAGCGGGACTTACGATCGGAGCACTCGGCGGTATCGCTGT CAATGAATATATGCAGACCTCGAACCCGGATATTTATGCGTTGGGAGATGCCGTGGAAGTACGCCACCTCGTGACAGGCA AACCAGCCTTGATCCCATTGGCGGGTCCGGCGAATAAGCAAGGACGTATCGTAGCCGATAATATCGTATCCGGCAATAAG GAAACTTATGACGGGACGATGGGAACCTCTATCGCCAAGGTATTCGACTTGACGGTCGCCACGGCGGGAGCTAACGCTAA GCTGTTGAAACGGGAAGGAATCGCTTATCAATCCTCCTATACGCATGGAGCCTCGCATGCGGGATATTACCCGGGAGCCG TGCCTTTATCGATCAAGATATTGTTCGCACCGGAAGACGGACGACTGTTAGGGGCGCAAGTCGTAGGTTTCGGAGGCGTA GACAAACGGATCGAGATGTTAGCGCAAGTGATCCAGCGGAAAGGTACGGTCTATGACCTGACTGAGTTAGAACATGCGTA TGCTCCTCCTTATTCAGCCGCTAAAGATCCTGTAAATATGGCCGGTTTCGTAGCGGAGAACCTGCTTACGGGAAAAGCGA AAGCGATCCAGTGGAGAGAAATCCAGAACTTATCGCCAGATACCGTACGTATCGATGTCCGTACCCGTGACGAGTACAGC TTAGGGACAATCCCCGGCTTCATCAATATCCCGGTTGATGAGTTAAGAGAACATTTGGCGGAACTGCCCAAGGATAAACC GATCGTAGTGACTTGCGCCGTTGGATTAAGGGGCTATTTGGCTTATCGCATCCTGACTCAAAATGGCTTCACGAATGTCC GGAACCTATCCGGTGGTTACAAGACTTGGAGTGTAGCGACAGCAAAGATCAAGAATGAGCCGGCCTGCGCACCTTGTTCG TCCGAAGCTGTTTCTGATAAGGCATCTGGTAAAAGTAGCTCTTGCAAATCGACTCCGGCAGCTACGGCGATTAAGGTAGA CGCTTGCGGATTAATGTGTCCGGGACCGATCATGCAGTTGAAAAAGAACTATGAGAACTTGCGGGAAAATGAGTCATTGG AAATCACCGCAACAGATCAGGCTTTCGGAAAAGATGTCTCTTCATGGTGCAAGATAACCGGGGCAGAGTTAGTCTCTCTG GAAAATAAGGGAGGCACGATCGCCGCCACGGTACGAAAAAAAAAAGCTGAATGCAAAATAGCGACAGGTGGTAATAGTGC CGACAACAAGACATTGATCGTTTTCAGCGATGACCTCGATAAGGCGTTGGCCTCATTCGTCATAGCGAACGGGGCTGCCT CCACCGGAAAGAAGGTGACTATGTTCTTTACTTTCTGGGGACTTAACGTGATTAAGAAACGGGAAAAACCTGCCGTATCT AAAGATATCTTCGGCAAGATGTTTGGCTGGATGCTTCCGGCAAATAGCGAAAAGCTGAAACTATCTAAAATGAATATGGG TGGAGCCGGCAGTTGGATGATGCGCCTTATCATGAAGAAGAAACGGATCGACAGCTTGGAAAGCCTTATGGCACAAGCCG TAGAGAATGGTATCGAGATGATCGCCTGCACGATGAGCATGGACGTAATGGGCGTCAAAAAAGAAGAACTGATGGATAAC GTTGTCCTAGGAGGCGTAGCCACCTATCTGGAACGTGCGGAAGACGCAAACGTAAACTTATTCATCTAA
Upstream 100 bases:
>100_bases AATCAACTCAAAGAATACATACAAAAGGGATGAATCCCTTTTTTTAACTAATTATTGTCTACTAACAAATATGTATAATA CAAATTAAATAAAAATAGAT
Downstream 100 bases:
>100_bases TTCATTCAAAAAAAATATCCCAGCATATCCACAATAAGGACAATGCTGGGATATTTTATAAAAAAGAGATTATACGAAGT CCAATGTTGAACGTTTCATA
Product: pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: CoA-disulfide reductase; CoADR [H]
Number of amino acids: Translated: 822; Mature: 822
Protein sequence:
>822_residues MKYLIIGGVAGGATVAARLRRMDEKAEIILFERGKYVSYANCGLPYYIGDTINDRNKLFVQTVKGFTDRFRIDIRTEQEV TRILPESKQVEVKKLGTGETYTETYDKLVLSPGAEPLRPRIEGIESKKIFTLRNVPDTDTIKNYVNTEKPRTAVVVGGGF IGLEMAENLHELGIHVTVVEMANQVMAPLDYSMAAIVHQQLIGKQVGLMLEDGVSRFEETSGGVTVHLKSGKQIPADMVL LSIGVRPETRLAKEAGLTIGALGGIAVNEYMQTSNPDIYALGDAVEVRHLVTGKPALIPLAGPANKQGRIVADNIVSGNK ETYDGTMGTSIAKVFDLTVATAGANAKLLKREGIAYQSSYTHGASHAGYYPGAVPLSIKILFAPEDGRLLGAQVVGFGGV DKRIEMLAQVIQRKGTVYDLTELEHAYAPPYSAAKDPVNMAGFVAENLLTGKAKAIQWREIQNLSPDTVRIDVRTRDEYS LGTIPGFINIPVDELREHLAELPKDKPIVVTCAVGLRGYLAYRILTQNGFTNVRNLSGGYKTWSVATAKIKNEPACAPCS SEAVSDKASGKSSSCKSTPAATAIKVDACGLMCPGPIMQLKKNYENLRENESLEITATDQAFGKDVSSWCKITGAELVSL ENKGGTIAATVRKKKAECKIATGGNSADNKTLIVFSDDLDKALASFVIANGAASTGKKVTMFFTFWGLNVIKKREKPAVS KDIFGKMFGWMLPANSEKLKLSKMNMGGAGSWMMRLIMKKKRIDSLESLMAQAVENGIEMIACTMSMDVMGVKKEELMDN VVLGGVATYLERAEDANVNLFI
Sequences:
>Translated_822_residues MKYLIIGGVAGGATVAARLRRMDEKAEIILFERGKYVSYANCGLPYYIGDTINDRNKLFVQTVKGFTDRFRIDIRTEQEV TRILPESKQVEVKKLGTGETYTETYDKLVLSPGAEPLRPRIEGIESKKIFTLRNVPDTDTIKNYVNTEKPRTAVVVGGGF IGLEMAENLHELGIHVTVVEMANQVMAPLDYSMAAIVHQQLIGKQVGLMLEDGVSRFEETSGGVTVHLKSGKQIPADMVL LSIGVRPETRLAKEAGLTIGALGGIAVNEYMQTSNPDIYALGDAVEVRHLVTGKPALIPLAGPANKQGRIVADNIVSGNK ETYDGTMGTSIAKVFDLTVATAGANAKLLKREGIAYQSSYTHGASHAGYYPGAVPLSIKILFAPEDGRLLGAQVVGFGGV DKRIEMLAQVIQRKGTVYDLTELEHAYAPPYSAAKDPVNMAGFVAENLLTGKAKAIQWREIQNLSPDTVRIDVRTRDEYS LGTIPGFINIPVDELREHLAELPKDKPIVVTCAVGLRGYLAYRILTQNGFTNVRNLSGGYKTWSVATAKIKNEPACAPCS SEAVSDKASGKSSSCKSTPAATAIKVDACGLMCPGPIMQLKKNYENLRENESLEITATDQAFGKDVSSWCKITGAELVSL ENKGGTIAATVRKKKAECKIATGGNSADNKTLIVFSDDLDKALASFVIANGAASTGKKVTMFFTFWGLNVIKKREKPAVS KDIFGKMFGWMLPANSEKLKLSKMNMGGAGSWMMRLIMKKKRIDSLESLMAQAVENGIEMIACTMSMDVMGVKKEELMDN VVLGGVATYLERAEDANVNLFI >Mature_822_residues MKYLIIGGVAGGATVAARLRRMDEKAEIILFERGKYVSYANCGLPYYIGDTINDRNKLFVQTVKGFTDRFRIDIRTEQEV TRILPESKQVEVKKLGTGETYTETYDKLVLSPGAEPLRPRIEGIESKKIFTLRNVPDTDTIKNYVNTEKPRTAVVVGGGF IGLEMAENLHELGIHVTVVEMANQVMAPLDYSMAAIVHQQLIGKQVGLMLEDGVSRFEETSGGVTVHLKSGKQIPADMVL LSIGVRPETRLAKEAGLTIGALGGIAVNEYMQTSNPDIYALGDAVEVRHLVTGKPALIPLAGPANKQGRIVADNIVSGNK ETYDGTMGTSIAKVFDLTVATAGANAKLLKREGIAYQSSYTHGASHAGYYPGAVPLSIKILFAPEDGRLLGAQVVGFGGV DKRIEMLAQVIQRKGTVYDLTELEHAYAPPYSAAKDPVNMAGFVAENLLTGKAKAIQWREIQNLSPDTVRIDVRTRDEYS LGTIPGFINIPVDELREHLAELPKDKPIVVTCAVGLRGYLAYRILTQNGFTNVRNLSGGYKTWSVATAKIKNEPACAPCS SEAVSDKASGKSSSCKSTPAATAIKVDACGLMCPGPIMQLKKNYENLRENESLEITATDQAFGKDVSSWCKITGAELVSL ENKGGTIAATVRKKKAECKIATGGNSADNKTLIVFSDDLDKALASFVIANGAASTGKKVTMFFTFWGLNVIKKREKPAVS KDIFGKMFGWMLPANSEKLKLSKMNMGGAGSWMMRLIMKKKRIDSLESLMAQAVENGIEMIACTMSMDVMGVKKEELMDN VVLGGVATYLERAEDANVNLFI
Specific function: Catalyzes specifically the NADPH-dependent reduction of coenzyme A disulfide [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI65787454, Length=324, Percent_Identity=28.3950617283951, Blast_Score=111, Evalue=3e-24, Organism=Homo sapiens, GI21389617, Length=324, Percent_Identity=28.3950617283951, Blast_Score=111, Evalue=3e-24, Organism=Homo sapiens, GI226437568, Length=324, Percent_Identity=28.3950617283951, Blast_Score=111, Evalue=4e-24, Organism=Homo sapiens, GI91199540, Length=302, Percent_Identity=27.4834437086093, Blast_Score=69, Evalue=2e-11, Organism=Escherichia coli, GI1789065, Length=319, Percent_Identity=28.8401253918495, Blast_Score=116, Evalue=6e-27, Organism=Escherichia coli, GI1786307, Length=303, Percent_Identity=29.3729372937294, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1789765, Length=403, Percent_Identity=25.5583126550869, Blast_Score=97, Evalue=4e-21, Organism=Escherichia coli, GI87082354, Length=317, Percent_Identity=27.7602523659306, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1788892, Length=199, Percent_Identity=31.1557788944724, Blast_Score=79, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17559934, Length=202, Percent_Identity=28.7128712871287, Blast_Score=72, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6325166, Length=318, Percent_Identity=23.5849056603774, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24585130, Length=322, Percent_Identity=24.223602484472, Blast_Score=86, Evalue=1e-16, Organism=Drosophila melanogaster, GI281359715, Length=328, Percent_Identity=24.390243902439, Blast_Score=84, Evalue=5e-16, Organism=Drosophila melanogaster, GI281359713, Length=328, Percent_Identity=24.390243902439, Blast_Score=84, Evalue=5e-16, Organism=Drosophila melanogaster, GI24639250, Length=328, Percent_Identity=24.390243902439, Blast_Score=84, Evalue=5e-16, Organism=Drosophila melanogaster, GI18543267, Length=328, Percent_Identity=24.390243902439, Blast_Score=84, Evalue=5e-16, Organism=Drosophila melanogaster, GI24639252, Length=328, Percent_Identity=24.390243902439, Blast_Score=84, Evalue=5e-16, Organism=Drosophila melanogaster, GI24639257, Length=328, Percent_Identity=24.390243902439, Blast_Score=83, Evalue=7e-16, Organism=Drosophila melanogaster, GI21358499, Length=364, Percent_Identity=27.4725274725275, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017758 - InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.14 [H]
Molecular weight: Translated: 89058; Mature: 89058
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: PS50206 RHODANESE_3 ; PS01148 UPF0033
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLIIGGVAGGATVAARLRRMDEKAEIILFERGKYVSYANCGLPYYIGDTINDRNKLFV CEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCEEECCCCCCCCCEEH QTVKGFTDRFRIDIRTEQEVTRILPESKQVEVKKLGTGETYTETYDKLVLSPGAEPLRPR HHHHCCCEEEEEEEECHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHEEECCCCCCCCHH IEGIESKKIFTLRNVPDTDTIKNYVNTEKPRTAVVVGGGFIGLEMAENLHELGIHVTVVE HCCCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEEECCCEEEHHHHHHHHHCCCEEEEHH MANQVMAPLDYSMAAIVHQQLIGKQVGLMLEDGVSRFEETSGGVTVHLKSGKQIPADMVL HHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEE LSIGVRPETRLAKEAGLTIGALGGIAVNEYMQTSNPDIYALGDAVEVRHLVTGKPALIPL EEECCCCCHHHHHHCCCEEEECCCHHHHHHHHCCCCCEEEECCHHEEHHHHCCCCEEEEE AGPANKQGRIVADNIVSGNKETYDGTMGTSIAKVFDLTVATAGANAKLLKREGIAYQSSY CCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHEEEEEECCCCCEEHHHCCCEEECCC THGASHAGYYPGAVPLSIKILFAPEDGRLLGAQVVGFGGVDKRIEMLAQVIQRKGTVYDL CCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCEEEH TELEHAYAPPYSAAKDPVNMAGFVAENLLTGKAKAIQWREIQNLSPDTVRIDVRTRDEYS HHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHEEEHHHHCCCCCCEEEEEEEECCCCC LGTIPGFINIPVDELREHLAELPKDKPIVVTCAVGLRGYLAYRILTQNGFTNVRNLSGGY CCCCCCEEECCHHHHHHHHHHCCCCCCEEEEEECCHHHEEEEEEEECCCCCCHHCCCCCC KTWSVATAKIKNEPACAPCSSEAVSDKASGKSSSCKSTPAATAIKVDACGLMCPGPIMQL EEEEEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHH KKNYENLRENESLEITATDQAFGKDVSSWCKITGAELVSLENKGGTIAATVRKKKAECKI HHHHHHHCCCCCEEEEECCHHHHCCHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCEEE ATGGNSADNKTLIVFSDDLDKALASFVIANGAASTGKKVTMFFTFWGLNVIKKREKPAVS EECCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHCCCCCHH KDIFGKMFGWMLPANSEKLKLSKMNMGGAGSWMMRLIMKKKRIDSLESLMAQAVENGIEM HHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE IACTMSMDVMGVKKEELMDNVVLGGVATYLERAEDANVNLFI EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEC >Mature Secondary Structure MKYLIIGGVAGGATVAARLRRMDEKAEIILFERGKYVSYANCGLPYYIGDTINDRNKLFV CEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCEEECCCCCCCCCEEH QTVKGFTDRFRIDIRTEQEVTRILPESKQVEVKKLGTGETYTETYDKLVLSPGAEPLRPR HHHHCCCEEEEEEEECHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHEEECCCCCCCCHH IEGIESKKIFTLRNVPDTDTIKNYVNTEKPRTAVVVGGGFIGLEMAENLHELGIHVTVVE HCCCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEEECCCEEEHHHHHHHHHCCCEEEEHH MANQVMAPLDYSMAAIVHQQLIGKQVGLMLEDGVSRFEETSGGVTVHLKSGKQIPADMVL HHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEE LSIGVRPETRLAKEAGLTIGALGGIAVNEYMQTSNPDIYALGDAVEVRHLVTGKPALIPL EEECCCCCHHHHHHCCCEEEECCCHHHHHHHHCCCCCEEEECCHHEEHHHHCCCCEEEEE AGPANKQGRIVADNIVSGNKETYDGTMGTSIAKVFDLTVATAGANAKLLKREGIAYQSSY CCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHEEEEEECCCCCEEHHHCCCEEECCC THGASHAGYYPGAVPLSIKILFAPEDGRLLGAQVVGFGGVDKRIEMLAQVIQRKGTVYDL CCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCEEEH TELEHAYAPPYSAAKDPVNMAGFVAENLLTGKAKAIQWREIQNLSPDTVRIDVRTRDEYS HHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHEEEHHHHCCCCCCEEEEEEEECCCCC LGTIPGFINIPVDELREHLAELPKDKPIVVTCAVGLRGYLAYRILTQNGFTNVRNLSGGY CCCCCCEEECCHHHHHHHHHHCCCCCCEEEEEECCHHHEEEEEEEECCCCCCHHCCCCCC KTWSVATAKIKNEPACAPCSSEAVSDKASGKSSSCKSTPAATAIKVDACGLMCPGPIMQL EEEEEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHH KKNYENLRENESLEITATDQAFGKDVSSWCKITGAELVSLENKGGTIAATVRKKKAECKI HHHHHHHCCCCCEEEEECCHHHHCCHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCEEE ATGGNSADNKTLIVFSDDLDKALASFVIANGAASTGKKVTMFFTFWGLNVIKKREKPAVS EECCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHCCCCCHH KDIFGKMFGWMLPANSEKLKLSKMNMGGAGSWMMRLIMKKKRIDSLESLMAQAVENGIEM HHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE IACTMSMDVMGVKKEELMDNVVLGGVATYLERAEDANVNLFI EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA