| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is yqeZ [H]
Identifier: 150007180
GI number: 150007180
Start: 621191
End: 622570
Strand: Reverse
Name: yqeZ [H]
Synonym: BDI_0525
Alternate gene names: 150007180
Gene position: 622570-621191 (Counterclockwise)
Preceding gene: 150007182
Following gene: 150007178
Centisome position: 12.94
GC content: 42.75
Gene sequence:
>1380_bases ATGAAACGTTTATTAACAATATTAACAGCTATAGTATTAATACTTGCAATCTCTCTTCAATCAGAGGCTAAAGAGAAGTC CTTAATATATACGATTGATATAAAAAAAGAGATCGATAACACCACGTGGATTTATCTCCATAACGGATTATCAGAGGCCA AGCAATTGAACGCCGATGCCATCTTATTGCATATGAACACATACGGCGGATTACTGGAATCTGCCGATTCTATGCGAACG GCTATTTTATATAGTCCCATACCAGTATATGTATTTATCGATAATAACGCAGCTTCAGCAGGTGCTTTAATTTCCATAGC ATGCAAGAAAATCTATATGCGGAAAGGGGCGAATATAGGTGCGGCAACGGTTGTCAATCAAACGGGTGCGGCTCTACCTG ATAAATATCAATCTTATATGCGTTCCATGATCCGTTCGACGGCTGAGGCACAAGGGAAAGATACGCTTATACAAAACGGC GACACGATCTATAAATGGAAAAGAGATCCTTTAATCGCCGAAGCGATGGTCGATGACAGAGTGATCGTCCCCAACCTCAT CGATAGCGGTAAGGTATTGACACTTACCTCTCAAGAAGCACTCAAATGGGGTTATTGCGATGGCATCGCCGAGAGTCCGG ATCAAGTAATCACAGAATATATCGGATGTAAGGACTATGAGATTAAAAGTTATGAACCCTCATGGTTCGATAATGTAAAA GGTTTCTTTATGAGTCCGGTAATACAGAGCTTATTAATCATTATTATCATCGGTGGTATTTACTTCGAGATGCAAACCCC GGGGCTTGGTTTTCCATCCGCCGCCGCGATAATAGCGGCTATCCTTTACTTCGCTCCTCTCTATATGGACGGGTTGGCTG AAAACTGGGAAATCCTGTTATTCATTCTCGGCGTTATATTAATAATGTTGGAGATATTCGTGATCCCGGGCTTTGGCATA GCGGGGATAAGTGGAATTATTCTCGTGGTCGGCGGACTTACGATGAGCTTACTGAACAATACTGTTTTTGATTTTCAAAA CGTATCTGGAATGGATACGGGCAGAGCCGCCTTAACGGTTCTATTAGGTCTGGGTATCGGATTCACGTTAGTGATATGGT TATCCAACAAAATAGGACATAAAGGACCGCTAAAGAAAATGGCATTAAACGCTGATTTGGAAAAAGCGGTATCCAGCCCC AATTTGACACAACTGATCGGAAAAGAGGGCACGGCCGCTACCGTTTTACGTCCTTCGGGTAAAGTATCTATCGAGGGAGA GTTGTATGACGGCGTATCGGAGTCTGGCTTCATCGAGAAAGGGACTCCTATCAAAGTCGTCAGATTCGAGAGCGCGCAAG TCTATGTAATCAACCTATAA
Upstream 100 bases:
>100_bases AGTATTATTTACAAGTTGCACAAGTTACAAAAATCAACATTTACAACAAGCCAGTTACAATTTTCAACCAAATATTAAAA ACGAATATAATACAAACAAG
Downstream 100 bases:
>100_bases ACGAGTCTATGCGATCCGTTTATAGGCAATACATTTATCGATCACGACATATTCCATCGCTCCCATAGCCATCAAATCAC TTAGGATGTTACGGGCCGCA
Product: putative membrane-bound serine protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MKRLLTILTAIVLILAISLQSEAKEKSLIYTIDIKKEIDNTTWIYLHNGLSEAKQLNADAILLHMNTYGGLLESADSMRT AILYSPIPVYVFIDNNAASAGALISIACKKIYMRKGANIGAATVVNQTGAALPDKYQSYMRSMIRSTAEAQGKDTLIQNG DTIYKWKRDPLIAEAMVDDRVIVPNLIDSGKVLTLTSQEALKWGYCDGIAESPDQVITEYIGCKDYEIKSYEPSWFDNVK GFFMSPVIQSLLIIIIIGGIYFEMQTPGLGFPSAAAIIAAILYFAPLYMDGLAENWEILLFILGVILIMLEIFVIPGFGI AGISGIILVVGGLTMSLLNNTVFDFQNVSGMDTGRAALTVLLGLGIGFTLVIWLSNKIGHKGPLKKMALNADLEKAVSSP NLTQLIGKEGTAATVLRPSGKVSIEGELYDGVSESGFIEKGTPIKVVRFESAQVYVINL
Sequences:
>Translated_459_residues MKRLLTILTAIVLILAISLQSEAKEKSLIYTIDIKKEIDNTTWIYLHNGLSEAKQLNADAILLHMNTYGGLLESADSMRT AILYSPIPVYVFIDNNAASAGALISIACKKIYMRKGANIGAATVVNQTGAALPDKYQSYMRSMIRSTAEAQGKDTLIQNG DTIYKWKRDPLIAEAMVDDRVIVPNLIDSGKVLTLTSQEALKWGYCDGIAESPDQVITEYIGCKDYEIKSYEPSWFDNVK GFFMSPVIQSLLIIIIIGGIYFEMQTPGLGFPSAAAIIAAILYFAPLYMDGLAENWEILLFILGVILIMLEIFVIPGFGI AGISGIILVVGGLTMSLLNNTVFDFQNVSGMDTGRAALTVLLGLGIGFTLVIWLSNKIGHKGPLKKMALNADLEKAVSSP NLTQLIGKEGTAATVLRPSGKVSIEGELYDGVSESGFIEKGTPIKVVRFESAQVYVINL >Mature_459_residues MKRLLTILTAIVLILAISLQSEAKEKSLIYTIDIKKEIDNTTWIYLHNGLSEAKQLNADAILLHMNTYGGLLESADSMRT AILYSPIPVYVFIDNNAASAGALISIACKKIYMRKGANIGAATVVNQTGAALPDKYQSYMRSMIRSTAEAQGKDTLIQNG DTIYKWKRDPLIAEAMVDDRVIVPNLIDSGKVLTLTSQEALKWGYCDGIAESPDQVITEYIGCKDYEIKSYEPSWFDNVK GFFMSPVIQSLLIIIIIGGIYFEMQTPGLGFPSAAAIIAAILYFAPLYMDGLAENWEILLFILGVILIMLEIFVIPGFGI AGISGIILVVGGLTMSLLNNTVFDFQNVSGMDTGRAALTVLLGLGIGFTLVIWLSNKIGHKGPLKKMALNADLEKAVSSP NLTQLIGKEGTAATVLRPSGKVSIEGELYDGVSESGFIEKGTPIKVVRFESAQVYVINL
Specific function: Unknown
COG id: COG1030
COG function: function code O; Membrane-bound serine protease (ClpP class)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002810 - InterPro: IPR002825 [H]
Pfam domain/function: PF01972 DUF114; PF01957 NfeD [H]
EC number: NA
Molecular weight: Translated: 49871; Mature: 49871
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLTILTAIVLILAISLQSEAKEKSLIYTIDIKKEIDNTTWIYLHNGLSEAKQLNADA CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHCCCCCEEEEEEECCHHHHHHCCCCE ILLHMNTYGGLLESADSMRTAILYSPIPVYVFIDNNAASAGALISIACKKIYMRKGANIG EEEEECCCCCHHHHHHHHHEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCC AATVVNQTGAALPDKYQSYMRSMIRSTAEAQGKDTLIQNGDTIYKWKRDPLIAEAMVDDR CEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCCCHHHHHCCCC VIVPNLIDSGKVLTLTSQEALKWGYCDGIAESPDQVITEYIGCKDYEIKSYEPSWFDNVK EEECCCCCCCCEEEEECHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCHHHHHH GFFMSPVIQSLLIIIIIGGIYFEMQTPGLGFPSAAAIIAAILYFAPLYMDGLAENWEILL HHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH FILGVILIMLEIFVIPGFGIAGISGIILVVGGLTMSLLNNTVFDFQNVSGMDTGRAALTV HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHH LLGLGIGFTLVIWLSNKIGHKGPLKKMALNADLEKAVSSPNLTQLIGKEGTAATVLRPSG HHHHHHHHEEEEEECCCCCCCCCHHHHHCCCCHHHHHCCCCHHHHHCCCCCEEEEECCCC KVSIEGELYDGVSESGFIEKGTPIKVVRFESAQVYVINL CEEECCHHCCCCCCCCCCCCCCCEEEEEECCCEEEEEEC >Mature Secondary Structure MKRLLTILTAIVLILAISLQSEAKEKSLIYTIDIKKEIDNTTWIYLHNGLSEAKQLNADA CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHCCCCCEEEEEEECCHHHHHHCCCCE ILLHMNTYGGLLESADSMRTAILYSPIPVYVFIDNNAASAGALISIACKKIYMRKGANIG EEEEECCCCCHHHHHHHHHEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCC AATVVNQTGAALPDKYQSYMRSMIRSTAEAQGKDTLIQNGDTIYKWKRDPLIAEAMVDDR CEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCCCHHHHHCCCC VIVPNLIDSGKVLTLTSQEALKWGYCDGIAESPDQVITEYIGCKDYEIKSYEPSWFDNVK EEECCCCCCCCEEEEECHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCHHHHHH GFFMSPVIQSLLIIIIIGGIYFEMQTPGLGFPSAAAIIAAILYFAPLYMDGLAENWEILL HHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH FILGVILIMLEIFVIPGFGIAGISGIILVVGGLTMSLLNNTVFDFQNVSGMDTGRAALTV HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHH LLGLGIGFTLVIWLSNKIGHKGPLKKMALNADLEKAVSSPNLTQLIGKEGTAATVLRPSG HHHHHHHHEEEEEECCCCCCCCCHHHHHCCCCHHHHHCCCCHHHHHCCCCCEEEEECCCC KVSIEGELYDGVSESGFIEKGTPIKVVRFESAQVYVINL CEEECCHHCCCCCCCCCCCCCCCEEEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]