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The map label for this gene is ycbL [H]

Identifier: 150007124

GI number: 150007124

Start: 541347

End: 541985

Strand: Reverse

Name: ycbL [H]

Synonym: BDI_0468

Alternate gene names: 150007124

Gene position: 541985-541347 (Counterclockwise)

Preceding gene: 150007125

Following gene: 150007123

Centisome position: 11.26

GC content: 50.39

Gene sequence:

>639_bases
ATGATTACGATAAAATCTTTCGAAGTAAACTATTTCTCCGAGAATACTTACTTGCTATACGATGATACCAAGGAGGCAGT
CCTTATCGATTGCGGCTGCCTGCGCAAAGAGGAACAAAAAGAAGTAAGCGACTTTATCGCCCAGAACGGGCTGACGCTGA
AACGTTACCTTTGTACGCACCTCCATCTGGATCACATATTCGGCAACGAATTCGTCCATAACACCTACGGGTTGAGCCCG
GAAGCCCATAAAGCGGACGTGGAGGGCCTTCCCTCCCCCGAGGAGCAAGCCAAGGCGTTCGGCCTGCCGATGAAGGCGAA
AAGCGTCCCGGTAGGGAAATATCTGGTAAACGGGGAAATCATAAAGTTCGGGAAATCCGAGCTGGCGGTATTGAGCGTTC
CCGGTCATTCGCCCGGAGGCGTGGCTTTCTATAACAAGAAGAACGGTTTCGTGATCGTCGGGGATTCCTTGTTCGCCGGA
AGCATCGGCCGTACCGATTTATGGGGAGGCAACCAAGATATACTGCTTGCCGCTATCAAGGACAAATTACTGTCGTTGCC
GGACGAGACCGTGGTATACCCCGGCCATGGCCCCGAGACACGAATCATTGATGAGAAATTAAATAATCCTTATTTATAA

Upstream 100 bases:

>100_bases
ACGAGATATTGCCTTTCCGGAACCAAGCGATAAGCATGGATCTGAAAGACCATTTTAAAGAAGAGTTTTTTGAAACTAAA
AAAGTAGTGTACGTACCCTT

Downstream 100 bases:

>100_bases
AATACTAGAATTATGGACACAAATAAGTTTGTAAACCGCCACGTGGGCATCTCAGCGGAAGATATTCCCGCTATGTTGGA
GACGATTGGCGTGAAGTCTT

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MITIKSFEVNYFSENTYLLYDDTKEAVLIDCGCLRKEEQKEVSDFIAQNGLTLKRYLCTHLHLDHIFGNEFVHNTYGLSP
EAHKADVEGLPSPEEQAKAFGLPMKAKSVPVGKYLVNGEIIKFGKSELAVLSVPGHSPGGVAFYNKKNGFVIVGDSLFAG
SIGRTDLWGGNQDILLAAIKDKLLSLPDETVVYPGHGPETRIIDEKLNNPYL

Sequences:

>Translated_212_residues
MITIKSFEVNYFSENTYLLYDDTKEAVLIDCGCLRKEEQKEVSDFIAQNGLTLKRYLCTHLHLDHIFGNEFVHNTYGLSP
EAHKADVEGLPSPEEQAKAFGLPMKAKSVPVGKYLVNGEIIKFGKSELAVLSVPGHSPGGVAFYNKKNGFVIVGDSLFAG
SIGRTDLWGGNQDILLAAIKDKLLSLPDETVVYPGHGPETRIIDEKLNNPYL
>Mature_212_residues
MITIKSFEVNYFSENTYLLYDDTKEAVLIDCGCLRKEEQKEVSDFIAQNGLTLKRYLCTHLHLDHIFGNEFVHNTYGLSP
EAHKADVEGLPSPEEQAKAFGLPMKAKSVPVGKYLVNGEIIKFGKSELAVLSVPGHSPGGVAFYNKKNGFVIVGDSLFAG
SIGRTDLWGGNQDILLAAIKDKLLSLPDETVVYPGHGPETRIIDEKLNNPYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Homo sapiens, GI21703352, Length=200, Percent_Identity=28.5, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI116642887, Length=200, Percent_Identity=28.5, Blast_Score=65, Evalue=3e-11,
Organism=Escherichia coli, GI1787158, Length=211, Percent_Identity=37.4407582938389, Blast_Score=127, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI17538952, Length=142, Percent_Identity=32.3943661971831, Blast_Score=71, Evalue=3e-13,
Organism=Drosophila melanogaster, GI221330176, Length=205, Percent_Identity=28.780487804878, Blast_Score=76, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 23386; Mature: 23386

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: PS01098 LIPASE_GDSL_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITIKSFEVNYFSENTYLLYDDTKEAVLIDCGCLRKEEQKEVSDFIAQNGLTLKRYLCTH
CEEEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
LHLDHIFGNEFVHNTYGLSPEAHKADVEGLPSPEEQAKAFGLPMKAKSVPVGKYLVNGEI
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEECCEE
IKFGKSELAVLSVPGHSPGGVAFYNKKNGFVIVGDSLFAGSIGRTDLWGGNQDILLAAIK
EEECCCCEEEEECCCCCCCCEEEEECCCCEEEECCCEEECCCCCCCCCCCCCCEEEEEEH
DKLLSLPDETVVYPGHGPETRIIDEKLNNPYL
HHHHCCCCCEEEECCCCCCCEEEHHCCCCCCC
>Mature Secondary Structure
MITIKSFEVNYFSENTYLLYDDTKEAVLIDCGCLRKEEQKEVSDFIAQNGLTLKRYLCTH
CEEEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
LHLDHIFGNEFVHNTYGLSPEAHKADVEGLPSPEEQAKAFGLPMKAKSVPVGKYLVNGEI
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEECCEE
IKFGKSELAVLSVPGHSPGGVAFYNKKNGFVIVGDSLFAGSIGRTDLWGGNQDILLAAIK
EEECCCCEEEEECCCCCCCCEEEEECCCCEEEECCCEEECCCCCCCCCCCCCCEEEEEEH
DKLLSLPDETVVYPGHGPETRIIDEKLNNPYL
HHHHCCCCCEEEECCCCCCCEEEHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]