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The map label for this gene is yjdL [C]

Identifier: 150007121

GI number: 150007121

Start: 535884

End: 537263

Strand: Reverse

Name: yjdL [C]

Synonym: BDI_0465

Alternate gene names: 150007121

Gene position: 537263-535884 (Counterclockwise)

Preceding gene: 150007122

Following gene: 150007120

Centisome position: 11.17

GC content: 50.43

Gene sequence:

>1380_bases
ATGACAACTAAGAAACAAGAGAAAATCAAATTCAGTAAAGCATTCTGGGTAGCGAACACCGTCGAGTTGTTCGAGCGAGC
CGCTTATTATGGCGTATTTATCGTTATAACCCTTTATCTTAGCCGCATCTTAGGCTTTAACGACATTCAGGCCGCCAGCA
TCGCCGGTATCTTTTCCGCTTGTCTGTATCTGCTGCCCACATTCGCCGGAGCGTTGGCCGATAAGATCGGTTTCCGCAAC
TCGATGCTACTGGCTTTCACTTTGTTAACTTGTGGCTATCTAGGACTGGCTGTTTACCCTACTTGGCTTCAATCCGCCGG
ACTGGTTGAATACAGCACGACGACTACCTTTACGGGATTGCTGGAGAGCAATCTTCAGTACGGCATTATCCCTATCATGG
CCTTGATCGTATGCGGCGGGGCTTTTATCAAGAGCGTTATCTCCGGCACGGTCGCTAAAGAGACTACGCCGGAAACCCGT
GCGAAGGGCTTCTCTATCTTCTACGCGATGGTAAATATCGGGGCCTTCTCCGGGAAGACCATCGTGAAGCCGCTTCGTGA
GGCGTTGGGCAACGAAGGTTTGATTACCTTGAACTATTTCTCGGCGAGCATGACCTTCCTTGCCTTGCTAGCCATCTGGT
TCTTCTACAAAAGCGCTCAGCATTCGGGCGAGGGCAAGACGTTCGGGCAGATCTGGAACGCCTTGATCAAGGTTTGTAGT
AACGGACGGCTCATTACATTAATCATCATTATCACCGGATTCTGGATGGTACAACACCAGCTGTATGCCACGATGCCAAA
ATATGTGCTTCGTTTGGCCGGCGAGGGAGCCTCTCCTTCTTGGTATGCCAACGTAAACCCTTTAGTCGTAGTTCTGACAG
TCAATCTAGTAACACAGATGATGCGGAAGCGGACAGCGCTTACCTCCATGACGGTGGGTATGTTTATCATGCCGGTGTCC
GCTCTTTGCATGGCATCCGGTAATATGCTGGATACTAATTCCTTGATCCTAGGGATGCATCCCGTAGCCTTCATGATGGT
GGTGGGTATCGTCTTCCAAGGGCTGGCGGAGACGTTCATTTCCCCTCGCTTTCTCGAGTATTTCTCCTTGCAAGCACCCA
AGGGAGAGGAAGGTCTCTATCTTGGATTCAGCCATTTGCATTCTTTCCTCTCCTCTATCTTCGGATTCGGGCTATCCGGT
TTCCTTTTAAGCAAGTATTGCCCGGAGCCAACCCTGTTCGCCTCTCACGAGGAATGGCTGGCGGCAAGCGCGAACGCCCA
TTACATCTGGTATTACTTCGGTGCGATCGCCTTGGTATCCGCCGTAGCGTTGATCGTGTATGGACAAGTCGTAAAGAGGC
TGGATAGCCAAAAGATTTGA

Upstream 100 bases:

>100_bases
ATACGATAAAACAAAGACGAGGAGGCGCAGCTCTTCATTTTCTCGCCTGCGCCTCCTCTTTGACTTATCCATCTAATCTA
TCTTACTAATAAATAATATC

Downstream 100 bases:

>100_bases
CCCGATAAAACTACGAGGTCAAATCCATTACCTTTGATTTGACCTCGTAGTTCTAAAATATCTAATCCAAACACATGAAT
TTGACCTTTAAGGCTTGCGA

Product: putative permease

Products: NA

Alternate protein names: Amino Acid/Peptide Transporter; Dipeptide/Tripeptide Permease; Di-Tripeptide ABC Transporter-Like Protein; Transport-Related Membrane Protein; Permease; Facilitator Superfamily Transmembrane Transporter; Proton/Peptide Symporter Family Protein

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MTTKKQEKIKFSKAFWVANTVELFERAAYYGVFIVITLYLSRILGFNDIQAASIAGIFSACLYLLPTFAGALADKIGFRN
SMLLAFTLLTCGYLGLAVYPTWLQSAGLVEYSTTTTFTGLLESNLQYGIIPIMALIVCGGAFIKSVISGTVAKETTPETR
AKGFSIFYAMVNIGAFSGKTIVKPLREALGNEGLITLNYFSASMTFLALLAIWFFYKSAQHSGEGKTFGQIWNALIKVCS
NGRLITLIIIITGFWMVQHQLYATMPKYVLRLAGEGASPSWYANVNPLVVVLTVNLVTQMMRKRTALTSMTVGMFIMPVS
ALCMASGNMLDTNSLILGMHPVAFMMVVGIVFQGLAETFISPRFLEYFSLQAPKGEEGLYLGFSHLHSFLSSIFGFGLSG
FLLSKYCPEPTLFASHEEWLAASANAHYIWYYFGAIALVSAVALIVYGQVVKRLDSQKI

Sequences:

>Translated_459_residues
MTTKKQEKIKFSKAFWVANTVELFERAAYYGVFIVITLYLSRILGFNDIQAASIAGIFSACLYLLPTFAGALADKIGFRN
SMLLAFTLLTCGYLGLAVYPTWLQSAGLVEYSTTTTFTGLLESNLQYGIIPIMALIVCGGAFIKSVISGTVAKETTPETR
AKGFSIFYAMVNIGAFSGKTIVKPLREALGNEGLITLNYFSASMTFLALLAIWFFYKSAQHSGEGKTFGQIWNALIKVCS
NGRLITLIIIITGFWMVQHQLYATMPKYVLRLAGEGASPSWYANVNPLVVVLTVNLVTQMMRKRTALTSMTVGMFIMPVS
ALCMASGNMLDTNSLILGMHPVAFMMVVGIVFQGLAETFISPRFLEYFSLQAPKGEEGLYLGFSHLHSFLSSIFGFGLSG
FLLSKYCPEPTLFASHEEWLAASANAHYIWYYFGAIALVSAVALIVYGQVVKRLDSQKI
>Mature_458_residues
TTKKQEKIKFSKAFWVANTVELFERAAYYGVFIVITLYLSRILGFNDIQAASIAGIFSACLYLLPTFAGALADKIGFRNS
MLLAFTLLTCGYLGLAVYPTWLQSAGLVEYSTTTTFTGLLESNLQYGIIPIMALIVCGGAFIKSVISGTVAKETTPETRA
KGFSIFYAMVNIGAFSGKTIVKPLREALGNEGLITLNYFSASMTFLALLAIWFFYKSAQHSGEGKTFGQIWNALIKVCSN
GRLITLIIIITGFWMVQHQLYATMPKYVLRLAGEGASPSWYANVNPLVVVLTVNLVTQMMRKRTALTSMTVGMFIMPVSA
LCMASGNMLDTNSLILGMHPVAFMMVVGIVFQGLAETFISPRFLEYFSLQAPKGEEGLYLGFSHLHSFLSSIFGFGLSGF
LLSKYCPEPTLFASHEEWLAASANAHYIWYYFGAIALVSAVALIVYGQVVKRLDSQKI

Specific function: Unknown

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790572, Length=168, Percent_Identity=27.3809523809524, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50424; Mature: 50293

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS01023 PTR2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKKQEKIKFSKAFWVANTVELFERAAYYGVFIVITLYLSRILGFNDIQAASIAGIFSA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
CLYLLPTFAGALADKIGFRNSMLLAFTLLTCGYLGLAVYPTWLQSAGLVEYSTTTTFTGL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHH
LESNLQYGIIPIMALIVCGGAFIKSVISGTVAKETTPETRAKGFSIFYAMVNIGAFSGKT
HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH
IVKPLREALGNEGLITLNYFSASMTFLALLAIWFFYKSAQHSGEGKTFGQIWNALIKVCS
HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC
NGRLITLIIIITGFWMVQHQLYATMPKYVLRLAGEGASPSWYANVNPLVVVLTVNLVTQM
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEHHHHHHHHH
MRKRTALTSMTVGMFIMPVSALCMASGNMLDTNSLILGMHPVAFMMVVGIVFQGLAETFI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEECCHHHHHHHHHHHHHHHHHHHHC
SPRFLEYFSLQAPKGEEGLYLGFSHLHSFLSSIFGFGLSGFLLSKYCPEPTLFASHEEWL
CHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEECCCHHHH
AASANAHYIWYYFGAIALVSAVALIVYGQVVKRLDSQKI
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTKKQEKIKFSKAFWVANTVELFERAAYYGVFIVITLYLSRILGFNDIQAASIAGIFSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
CLYLLPTFAGALADKIGFRNSMLLAFTLLTCGYLGLAVYPTWLQSAGLVEYSTTTTFTGL
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHH
LESNLQYGIIPIMALIVCGGAFIKSVISGTVAKETTPETRAKGFSIFYAMVNIGAFSGKT
HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH
IVKPLREALGNEGLITLNYFSASMTFLALLAIWFFYKSAQHSGEGKTFGQIWNALIKVCS
HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC
NGRLITLIIIITGFWMVQHQLYATMPKYVLRLAGEGASPSWYANVNPLVVVLTVNLVTQM
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEHHHHHHHHH
MRKRTALTSMTVGMFIMPVSALCMASGNMLDTNSLILGMHPVAFMMVVGIVFQGLAETFI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEECCHHHHHHHHHHHHHHHHHHHHC
SPRFLEYFSLQAPKGEEGLYLGFSHLHSFLSSIFGFGLSGFLLSKYCPEPTLFASHEEWL
CHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEECCCHHHH
AASANAHYIWYYFGAIALVSAVALIVYGQVVKRLDSQKI
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA