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The map label for this gene is rbn [C]

Identifier: 150007019

GI number: 150007019

Start: 407151

End: 408521

Strand: Reverse

Name: rbn [C]

Synonym: BDI_0357

Alternate gene names: 150007019

Gene position: 408521-407151 (Counterclockwise)

Preceding gene: 150007027

Following gene: 150007018

Centisome position: 8.49

GC content: 49.6

Gene sequence:

>1371_bases
ATGCCCAAAAACAAGCCACGGGAAGAAAAGAAACCTATTGGAGAACGGATCAGCGCATTATTAGCACGAACCATCCGTTT
CGTTACCTACGACATTTGGCGGATTACCGAGAATGAAGTTAGTGGGCTGAAGGAGATTTATATCAATATCATCAAGACGG
TTATACTCGCCGTGCGGGGTTTCCAGAGCGAGAACCTGCAAACCAAGGCGTCGGCGCTTACCTACAGCACCTTGTTATCT
ATCGTACCTTTGCTGGCCGTATTATTAGGTATAGCTAAGGGCTTCGGTTTCCAAGGGACGGTACGGCAGGAGTTGTTCGA
TTATTTCCCCGGGCACGAGATGGAGCTGAACAAGGCGTTCGAGTTCGTGGAGAGCTATCTGGCGCAGGCGCAGGGGGGAG
TGATCATCGGGGTCGGTTTGATTTTATTGTTTTATACGGTGATCAACTTGATCTCGTCCGTGGAGGATACGTTCAACGAC
ATCTGGCAGATCCAGAAATCCCGTCCGTGGTACCGGAAGATATCCGATTATCTGGCCTTATTCCTCGTGCTGCCGGTGCT
GATGACGGCATCCAGCGGTTTGTCCATCTTCATGTCTACCTTGCAGAACTCGTTCTTGGGGCAATACTTGTTTTTTACGC
CACTCGTAGAGCTGTTCTTGCATATAGCGCCTTATATTATCACGACATTGGCTTTCACGGGGCTGTACGTCTCCCTGCCG
AATACGAAAGTAAGGTTCGTGAACGGGTTGGTGGCAGGCTTTATCGCTGGTTGCGCCTTCCAGTTGTTCCAATTTATTTA
TATCAGTGGGCAGATTTGGGTGAGCAAGTACAACGCTATTTACGGTAGTTTTGCCGCACTGCCTTTGTTGTTGCTTTGGT
TGCAGCTTTCTTGGTTGATTTGCTTGTTTGGCGCAGAGCTGTCGTACGCCTCCCAGAACGTGAAGAAATTCAGCTTTGAG
AGGGACAGCAAAAGTATCAGCCGCCGGTACAAGGATTTCTTGACCTTGCTGATCGCCTCGCTGATCGTCAAACGGTTCGT
GAAAGGCGAGAAACCCTATACGGCCGACGAGCTATCCGACGCTTACCGCATCCCTATCCGCATAACGACACAGATCTTAT
ACCTGCTCACGGAGTTGAACATCATCATCGAGGTGAACTACGGGAATGACGACCGTGTGGCATACTACCAGCCGGCGATC
GATGTCAATAAGATCACGGTCAGCTACCTGCTGACCCGCATGGACGAGTATGGCTCCGAGAACTTTAAGATTGACACGAG
CAAGCTTTTCAGCAAGGAATGGAAAGCCCTGCTGAAGACACGTGAGGATATGATAAAGGCAAACGACAATATCCTGCTGA
AAGACCTATAG

Upstream 100 bases:

>100_bases
TAAGACAAGATAAATGGCAGGCACCTCTTTCCAAAGAGGTACAGGACCCGGCTTATAGGCAGACTGCTTTTTTTATTTGC
CAATTAAATCATGTGCCGAT

Downstream 100 bases:

>100_bases
GGAATTGAAAATTGAGAATTGAGAATTGAGAATTAATACAGGAAATAGGGATTTGACGAGTGGGGCGGTATGGAAGGTGA
TCCTGCGTTTCGCTTTCCCT

Product: ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MPKNKPREEKKPIGERISALLARTIRFVTYDIWRITENEVSGLKEIYINIIKTVILAVRGFQSENLQTKASALTYSTLLS
IVPLLAVLLGIAKGFGFQGTVRQELFDYFPGHEMELNKAFEFVESYLAQAQGGVIIGVGLILLFYTVINLISSVEDTFND
IWQIQKSRPWYRKISDYLALFLVLPVLMTASSGLSIFMSTLQNSFLGQYLFFTPLVELFLHIAPYIITTLAFTGLYVSLP
NTKVRFVNGLVAGFIAGCAFQLFQFIYISGQIWVSKYNAIYGSFAALPLLLLWLQLSWLICLFGAELSYASQNVKKFSFE
RDSKSISRRYKDFLTLLIASLIVKRFVKGEKPYTADELSDAYRIPIRITTQILYLLTELNIIIEVNYGNDDRVAYYQPAI
DVNKITVSYLLTRMDEYGSENFKIDTSKLFSKEWKALLKTREDMIKANDNILLKDL

Sequences:

>Translated_456_residues
MPKNKPREEKKPIGERISALLARTIRFVTYDIWRITENEVSGLKEIYINIIKTVILAVRGFQSENLQTKASALTYSTLLS
IVPLLAVLLGIAKGFGFQGTVRQELFDYFPGHEMELNKAFEFVESYLAQAQGGVIIGVGLILLFYTVINLISSVEDTFND
IWQIQKSRPWYRKISDYLALFLVLPVLMTASSGLSIFMSTLQNSFLGQYLFFTPLVELFLHIAPYIITTLAFTGLYVSLP
NTKVRFVNGLVAGFIAGCAFQLFQFIYISGQIWVSKYNAIYGSFAALPLLLLWLQLSWLICLFGAELSYASQNVKKFSFE
RDSKSISRRYKDFLTLLIASLIVKRFVKGEKPYTADELSDAYRIPIRITTQILYLLTELNIIIEVNYGNDDRVAYYQPAI
DVNKITVSYLLTRMDEYGSENFKIDTSKLFSKEWKALLKTREDMIKANDNILLKDL
>Mature_455_residues
PKNKPREEKKPIGERISALLARTIRFVTYDIWRITENEVSGLKEIYINIIKTVILAVRGFQSENLQTKASALTYSTLLSI
VPLLAVLLGIAKGFGFQGTVRQELFDYFPGHEMELNKAFEFVESYLAQAQGGVIIGVGLILLFYTVINLISSVEDTFNDI
WQIQKSRPWYRKISDYLALFLVLPVLMTASSGLSIFMSTLQNSFLGQYLFFTPLVELFLHIAPYIITTLAFTGLYVSLPN
TKVRFVNGLVAGFIAGCAFQLFQFIYISGQIWVSKYNAIYGSFAALPLLLLWLQLSWLICLFGAELSYASQNVKKFSFER
DSKSISRRYKDFLTLLIASLIVKRFVKGEKPYTADELSDAYRIPIRITTQILYLLTELNIIIEVNYGNDDRVAYYQPAID
VNKITVSYLLTRMDEYGSENFKIDTSKLFSKEWKALLKTREDMIKANDNILLKDL

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=258, Percent_Identity=25.5813953488372, Blast_Score=85, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 52070; Mature: 51938

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKNKPREEKKPIGERISALLARTIRFVTYDIWRITENEVSGLKEIYINIIKTVILAVRG
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHC
FQSENLQTKASALTYSTLLSIVPLLAVLLGIAKGFGFQGTVRQELFDYFPGHEMELNKAF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHH
EFVESYLAQAQGGVIIGVGLILLFYTVINLISSVEDTFNDIWQIQKSRPWYRKISDYLAL
HHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FLVLPVLMTASSGLSIFMSTLQNSFLGQYLFFTPLVELFLHIAPYIITTLAFTGLYVSLP
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
NTKVRFVNGLVAGFIAGCAFQLFQFIYISGQIWVSKYNAIYGSFAALPLLLLWLQLSWLI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHH
CLFGAELSYASQNVKKFSFERDSKSISRRYKDFLTLLIASLIVKRFVKGEKPYTADELSD
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC
AYRIPIRITTQILYLLTELNIIIEVNYGNDDRVAYYQPAIDVNKITVSYLLTRMDEYGSE
CEECCHHHHHHHHHHHHHCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCC
NFKIDTSKLFSKEWKALLKTREDMIKANDNILLKDL
CCEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
>Mature Secondary Structure 
PKNKPREEKKPIGERISALLARTIRFVTYDIWRITENEVSGLKEIYINIIKTVILAVRG
CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHC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CCEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA