| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150006822
Identifier: 150006822
GI number: 150006822
Start: 164430
End: 165977
Strand: Reverse
Name: 150006822
Synonym: BDI_0153
Alternate gene names: NA
Gene position: 165977-164430 (Counterclockwise)
Preceding gene: 150006823
Following gene: 150006821
Centisome position: 3.45
GC content: 37.47
Gene sequence:
>1548_bases ATGGAACATGACAATCTGTTCATCCAAATTTTAGAAATCTTATCGATAAAATACACGAAGGATTTTACCCTAAGATTCTA CGAGAAGCATCCACACAAAAACAGCCTGTTTGGATTATCCGAGATGCTACGTTATTATAAGATAGAGAATGTAGCAGCCG AAATTCAAAAAACACAAGAATGCTTATCCTCATTGGATGTACCCTTTGTGGCTTACGTAGATCATGAGTTTGTATTGGTA CGACATGTTTCTACCGAGGCAATCATCTATTCATGGCGAGGTAAAAACATCACATTATCTATCCCGGTATTCTTGGAACG ATGGTCAGGAATCGTCCTTCTTTTCGAATCCACCGATGAATCTATTGAACCGGATTATAAAGAGCATAGAAAGGAATACT TACGACAGCGGATAGTAATCGCATGTTTCGTTTCATTACTTCTATCATTAATAGGGTGTGCCCTTATCACCAACAGAGGA ATGGAGATAGGAATCTGGGGGTTATGGGGTGTTAATGTGATCGGAGCATCTTTCTGCGGTATCCTGCTTTCTCGAGAGAT CTTAGGCTCGGATAAATATGTCAACAAAATTTGTTCCTTGTTTTTGAAATCCAGTGATTGCAACGGGACATTGGATTCCC AAGCATCTCATTTCTTGGGGATCAGTTGGAGTGTCTTCGGCTTAGGATATTTTCTTTCCGCAATATTGTTTATCGCCTTG TTGCCCCAATATGTTATATATGCAGAGACTCTGAATATAATCGCATTACCTTATACAGCGTGGAGCGTATGGTACCAAAA ATTTAGGGTAAAACAATGGTGCGCTTTATGTTTATCTGTACAAGCTACCGTATGGATCACCTTTCTTATCTCTCTATTCG CGATAGGCATGGATTTCAATCAATGGGATTTATTTGATTTCACTACCATTGGATGCGTGTATGGGCTCGTCATTCTATCG CTCCATTTTACTGTTACATTATACGTAAAAGAAAAGCAAATCCAACGAAGCAACAATAAACTTAGCAGCATAAAACTGAA TGCCTCTGTATTTAAGAGCTTATTAAACGAACAGCCTCAATATGACATTGACAAAAATACAGGAATATTATTGGGCAATA GGGATGCCAAAGAGTGGATTACCATTATCTCTAATCCACACTGTGCTCCTTGCGCAAAATTACATCTCCAAATAGAAAAG TTACTCAAAGAATATAAAGAAGAGATTTGCATACAAATCATCTTGACCTCTTTTAGCAAGGAATTAGAACCTAGCGCCAT GCTACTGACCTCCATGTATCTACTAAATAATGAATCGGATTATTTACGATTCCTATCTGACTGGTATGCAAAAGGGCGTC ATAAAAAAGAGGATTGCTATAAAAGATACAGATTAAATCCTAATGACAAAGATATGTTAGCCAATTTTCAAGCACAAAAC GAATGGGTTAGGCGCAATACAATAAGTTCCACTCCAACAGTTTTGACAAATGGTTATTTATTGCCGGAAGAATATGAGTT AAAGGATATGTCGTATTTAATAAATTAA
Upstream 100 bases:
>100_bases AAGAAGGAAGAGTTCGCACGACGCTTCCCCGGACTGAACGAGGAGAGTAATCCAGTGCTGTTTATCGGGAAGCTGAGATA ATCACTAAAAACTCTAAGCT
Downstream 100 bases:
>100_bases GTACTATGAATAAATTAGCATCACAAATAGATTCGCTAAATAAGCATTTGATAGGCTCATTACATACAAGTTACCCTTTC GGGTTGGCTCATGGCAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase
Number of amino acids: Translated: 515; Mature: 515
Protein sequence:
>515_residues MEHDNLFIQILEILSIKYTKDFTLRFYEKHPHKNSLFGLSEMLRYYKIENVAAEIQKTQECLSSLDVPFVAYVDHEFVLV RHVSTEAIIYSWRGKNITLSIPVFLERWSGIVLLFESTDESIEPDYKEHRKEYLRQRIVIACFVSLLLSLIGCALITNRG MEIGIWGLWGVNVIGASFCGILLSREILGSDKYVNKICSLFLKSSDCNGTLDSQASHFLGISWSVFGLGYFLSAILFIAL LPQYVIYAETLNIIALPYTAWSVWYQKFRVKQWCALCLSVQATVWITFLISLFAIGMDFNQWDLFDFTTIGCVYGLVILS LHFTVTLYVKEKQIQRSNNKLSSIKLNASVFKSLLNEQPQYDIDKNTGILLGNRDAKEWITIISNPHCAPCAKLHLQIEK LLKEYKEEICIQIILTSFSKELEPSAMLLTSMYLLNNESDYLRFLSDWYAKGRHKKEDCYKRYRLNPNDKDMLANFQAQN EWVRRNTISSTPTVLTNGYLLPEEYELKDMSYLIN
Sequences:
>Translated_515_residues MEHDNLFIQILEILSIKYTKDFTLRFYEKHPHKNSLFGLSEMLRYYKIENVAAEIQKTQECLSSLDVPFVAYVDHEFVLV RHVSTEAIIYSWRGKNITLSIPVFLERWSGIVLLFESTDESIEPDYKEHRKEYLRQRIVIACFVSLLLSLIGCALITNRG MEIGIWGLWGVNVIGASFCGILLSREILGSDKYVNKICSLFLKSSDCNGTLDSQASHFLGISWSVFGLGYFLSAILFIAL LPQYVIYAETLNIIALPYTAWSVWYQKFRVKQWCALCLSVQATVWITFLISLFAIGMDFNQWDLFDFTTIGCVYGLVILS LHFTVTLYVKEKQIQRSNNKLSSIKLNASVFKSLLNEQPQYDIDKNTGILLGNRDAKEWITIISNPHCAPCAKLHLQIEK LLKEYKEEICIQIILTSFSKELEPSAMLLTSMYLLNNESDYLRFLSDWYAKGRHKKEDCYKRYRLNPNDKDMLANFQAQN EWVRRNTISSTPTVLTNGYLLPEEYELKDMSYLIN >Mature_515_residues MEHDNLFIQILEILSIKYTKDFTLRFYEKHPHKNSLFGLSEMLRYYKIENVAAEIQKTQECLSSLDVPFVAYVDHEFVLV RHVSTEAIIYSWRGKNITLSIPVFLERWSGIVLLFESTDESIEPDYKEHRKEYLRQRIVIACFVSLLLSLIGCALITNRG MEIGIWGLWGVNVIGASFCGILLSREILGSDKYVNKICSLFLKSSDCNGTLDSQASHFLGISWSVFGLGYFLSAILFIAL LPQYVIYAETLNIIALPYTAWSVWYQKFRVKQWCALCLSVQATVWITFLISLFAIGMDFNQWDLFDFTTIGCVYGLVILS LHFTVTLYVKEKQIQRSNNKLSSIKLNASVFKSLLNEQPQYDIDKNTGILLGNRDAKEWITIISNPHCAPCAKLHLQIEK LLKEYKEEICIQIILTSFSKELEPSAMLLTSMYLLNNESDYLRFLSDWYAKGRHKKEDCYKRYRLNPNDKDMLANFQAQN EWVRRNTISSTPTVLTNGYLLPEEYELKDMSYLIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59625; Mature: 59625
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHDNLFIQILEILSIKYTKDFTLRFYEKHPHKNSLFGLSEMLRYYKIENVAAEIQKTQE CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH CLSSLDVPFVAYVDHEFVLVRHVSTEAIIYSWRGKNITLSIPVFLERWSGIVLLFESTDE HHHHCCCCEEEEECCCEEEEEECCCCEEEEEECCCEEEEEEHHHHHCCCCEEEEEECCCC SIEPDYKEHRKEYLRQRIVIACFVSLLLSLIGCALITNRGMEIGIWGLWGVNVIGASFCG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH ILLSREILGSDKYVNKICSLFLKSSDCNGTLDSQASHFLGISWSVFGLGYFLSAILFIAL HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHEECHHHHHHHHHHHHHHHHHHH LPQYVIYAETLNIIALPYTAWSVWYQKFRVKQWCALCLSVQATVWITFLISLFAIGMDFN HHHHHHHHHHHCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QWDLFDFTTIGCVYGLVILSLHFTVTLYVKEKQIQRSNNKLSSIKLNASVFKSLLNEQPQ CCCCHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHCCCCHHEEEECHHHHHHHHCCCCC YDIDKNTGILLGNRDAKEWITIISNPHCAPCAKLHLQIEKLLKEYKEEICIQIILTSFSK CCCCCCCEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELEPSAMLLTSMYLLNNESDYLRFLSDWYAKGRHKKEDCYKRYRLNPNDKDMLANFQAQN CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHH EWVRRNTISSTPTVLTNGYLLPEEYELKDMSYLIN HHHHHCCCCCCCCEEECCEECCCCCCHHHHHHHCC >Mature Secondary Structure MEHDNLFIQILEILSIKYTKDFTLRFYEKHPHKNSLFGLSEMLRYYKIENVAAEIQKTQE CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH CLSSLDVPFVAYVDHEFVLVRHVSTEAIIYSWRGKNITLSIPVFLERWSGIVLLFESTDE HHHHCCCCEEEEECCCEEEEEECCCCEEEEEECCCEEEEEEHHHHHCCCCEEEEEECCCC SIEPDYKEHRKEYLRQRIVIACFVSLLLSLIGCALITNRGMEIGIWGLWGVNVIGASFCG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH ILLSREILGSDKYVNKICSLFLKSSDCNGTLDSQASHFLGISWSVFGLGYFLSAILFIAL HHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHEECHHHHHHHHHHHHHHHHHHH LPQYVIYAETLNIIALPYTAWSVWYQKFRVKQWCALCLSVQATVWITFLISLFAIGMDFN HHHHHHHHHHHCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QWDLFDFTTIGCVYGLVILSLHFTVTLYVKEKQIQRSNNKLSSIKLNASVFKSLLNEQPQ CCCCHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHCCCCHHEEEECHHHHHHHHCCCCC YDIDKNTGILLGNRDAKEWITIISNPHCAPCAKLHLQIEKLLKEYKEEICIQIILTSFSK CCCCCCCEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELEPSAMLLTSMYLLNNESDYLRFLSDWYAKGRHKKEDCYKRYRLNPNDKDMLANFQAQN CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHH EWVRRNTISSTPTVLTNGYLLPEEYELKDMSYLIN HHHHHCCCCCCCCEEECCEECCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA