| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150006813
Identifier: 150006813
GI number: 150006813
Start: 154108
End: 155496
Strand: Reverse
Name: 150006813
Synonym: BDI_0144
Alternate gene names: NA
Gene position: 155496-154108 (Counterclockwise)
Preceding gene: 150006815
Following gene: 150006803
Centisome position: 3.23
GC content: 45.43
Gene sequence:
>1389_bases ATGAAAAAATTATCAATTCTAGCGATGGGCCTTCTCTTTGTCCTGACCACAGCCTGTAGTGTTTCCGGCAGTGGTACCTT ATTCGATGGCAAAGATAGTAACAAATGGAAAATGACAGGCGATGTCTCCGTTCAAGACGACATAATGACCTTGAAAGGTA CGGATGCACTGGCCGTACTGAAAAACGGCAAATACAAAAACTTCGATCTGACCCTTGATTTACGTACTACCCCGGGAGGC AAAGGCGCCGTCTGGTTCCATACGGACCCGACCTTGAAGAAAGGATATCGTATCGCTATCAATAATGACCGGGCTGATAA GGTTTGGTGGAAAATGACAGGAAGTCTTGTTTCCGTGAGGAATTTGACCAAAAGCTTCGTAAAAGAAGATCAATGGTTCA AGATGGATATCCGGGTAGCCGGACAAGAGATTGATGTAAATATAAACGGCGAACCGGTTGTGGAGTATATCCAACCGACC GCCCCATATCGTACGGACGCTAACGCCTATGCCTTATTATCGGAAGGGACATTTGCCATAGAGAGTGATGGTAGCGGTGA GATCCAGATCAAGAACATCACCGTGAACGTAATTGATGAATCCACGATCGATATCAACGCACAATTGGCGGAAGCTAACG ATGAGCAAAATGACGAGATCATTAAATTACATCAATCGGATTTCCCGGTATTAGATTATCACGTGCACTTAAAAGGTGGC TTAACCAAGGAAGTTGCCGCTAAGCAATCCCGCAAGACCGGTATCAATTATACGATCGCACCGAACTGCGGCATCGGTTT CCCAATCACGAACGACCAACAAGTCATGGATTACCTAAATGAGATGCGCTCACAGCCTTTCATCCTTGGCATGCAAGCGG AAGGACGCGAATGGATAACCACATTCTCTCCCGAGACTCTTAAAGAATTCGACTATGTGTTTACGGACGCTTTGACGTTC AAGGACAATAAAGGTCGCCGTACCCGCCTATGGATTCCGGAAGAGACTTGGATCGAGAATGAGGAGCAATATATGGACAT GATCGTAGATCGTATCTGCTCCGTATTGGAAGAGCCGGTAGATATCTATGTAAATCCTTGTTTCTTGCCATCTCCGATGG ATAAGCGTTTTGACGAATTCTGGACGGAGGCCCGCATGAACCGTTTCGTCGAGGCATTGGCAAAAAGCGGAAAAGCTTTA GAGATCAACGAACTATACAATATTCCAAATAAAGCGATCATTATGAAGGCGAAAGCCGCCGGCGTTAAATTCACGTTTGG AAGTAACAACGTGACACCAAACGTCAGCGATCTGTCTTACAGTATCCGCATGATGAAAGAATGTGGCCTGACGGCTGAGG ATATGTATAAACCGAAAGTTAAAATCTAA
Upstream 100 bases:
>100_bases AGGTTTATATCTTTATGGAAGTTAAAATCTTCAAAAAGGACATTGTATTTTAATTTTCGTTATCTTTGGAGGATATATTA TTACTTAAATCATTTATATC
Downstream 100 bases:
>100_bases TCACACATTTACCCTCACCCTAATCCCCCGTTTAGGGACACCCTAAATGAGCGATTAGGGTAGACCTAAACGAGGGATTA TTCTCTCTCTCGCAACATCC
Product: putative secreted glycosylhydrolase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MKKLSILAMGLLFVLTTACSVSGSGTLFDGKDSNKWKMTGDVSVQDDIMTLKGTDALAVLKNGKYKNFDLTLDLRTTPGG KGAVWFHTDPTLKKGYRIAINNDRADKVWWKMTGSLVSVRNLTKSFVKEDQWFKMDIRVAGQEIDVNINGEPVVEYIQPT APYRTDANAYALLSEGTFAIESDGSGEIQIKNITVNVIDESTIDINAQLAEANDEQNDEIIKLHQSDFPVLDYHVHLKGG LTKEVAAKQSRKTGINYTIAPNCGIGFPITNDQQVMDYLNEMRSQPFILGMQAEGREWITTFSPETLKEFDYVFTDALTF KDNKGRRTRLWIPEETWIENEEQYMDMIVDRICSVLEEPVDIYVNPCFLPSPMDKRFDEFWTEARMNRFVEALAKSGKAL EINELYNIPNKAIIMKAKAAGVKFTFGSNNVTPNVSDLSYSIRMMKECGLTAEDMYKPKVKI
Sequences:
>Translated_462_residues MKKLSILAMGLLFVLTTACSVSGSGTLFDGKDSNKWKMTGDVSVQDDIMTLKGTDALAVLKNGKYKNFDLTLDLRTTPGG KGAVWFHTDPTLKKGYRIAINNDRADKVWWKMTGSLVSVRNLTKSFVKEDQWFKMDIRVAGQEIDVNINGEPVVEYIQPT APYRTDANAYALLSEGTFAIESDGSGEIQIKNITVNVIDESTIDINAQLAEANDEQNDEIIKLHQSDFPVLDYHVHLKGG LTKEVAAKQSRKTGINYTIAPNCGIGFPITNDQQVMDYLNEMRSQPFILGMQAEGREWITTFSPETLKEFDYVFTDALTF KDNKGRRTRLWIPEETWIENEEQYMDMIVDRICSVLEEPVDIYVNPCFLPSPMDKRFDEFWTEARMNRFVEALAKSGKAL EINELYNIPNKAIIMKAKAAGVKFTFGSNNVTPNVSDLSYSIRMMKECGLTAEDMYKPKVKI >Mature_462_residues MKKLSILAMGLLFVLTTACSVSGSGTLFDGKDSNKWKMTGDVSVQDDIMTLKGTDALAVLKNGKYKNFDLTLDLRTTPGG KGAVWFHTDPTLKKGYRIAINNDRADKVWWKMTGSLVSVRNLTKSFVKEDQWFKMDIRVAGQEIDVNINGEPVVEYIQPT APYRTDANAYALLSEGTFAIESDGSGEIQIKNITVNVIDESTIDINAQLAEANDEQNDEIIKLHQSDFPVLDYHVHLKGG LTKEVAAKQSRKTGINYTIAPNCGIGFPITNDQQVMDYLNEMRSQPFILGMQAEGREWITTFSPETLKEFDYVFTDALTF KDNKGRRTRLWIPEETWIENEEQYMDMIVDRICSVLEEPVDIYVNPCFLPSPMDKRFDEFWTEARMNRFVEALAKSGKAL EINELYNIPNKAIIMKAKAAGVKFTFGSNNVTPNVSDLSYSIRMMKECGLTAEDMYKPKVKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52149; Mature: 52149
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLSILAMGLLFVLTTACSVSGSGTLFDGKDSNKWKMTGDVSVQDDIMTLKGTDALAVL CCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEECCEECCCEEEEECCCEEEEE KNGKYKNFDLTLDLRTTPGGKGAVWFHTDPTLKKGYRIAINNDRADKVWWKMTGSLVSVR ECCCEECEEEEEEEEECCCCCEEEEEECCCCHHCCEEEEECCCCCCEEEEEECCCHHHHH NLTKSFVKEDQWFKMDIRVAGQEIDVNINGEPVVEYIQPTAPYRTDANAYALLSEGTFAI HHHHHHHCCCCEEEEEEEEECEEEEEEECCCCCEEEECCCCCCCCCCCEEEEEECCEEEE ESDGSGEIQIKNITVNVIDESTIDINAQLAEANDEQNDEIIKLHQSDFPVLDYHVHLKGG ECCCCCEEEEEEEEEEEEECCEEEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEEECCC LTKEVAAKQSRKTGINYTIAPNCGIGFPITNDQQVMDYLNEMRSQPFILGMQAEGREWIT CCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEE TFSPETLKEFDYVFTDALTFKDNKGRRTRLWIPEETWIENEEQYMDMIVDRICSVLEEPV ECCHHHHHHHHHHHEEEEEEECCCCCEEEEECCCHHHCCCHHHHHHHHHHHHHHHHCCCC DIYVNPCFLPSPMDKRFDEFWTEARMNRFVEALAKSGKALEINELYNIPNKAIIMKAKAA EEEECCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHCCCCCEEEEEEECC GVKFTFGSNNVTPNVSDLSYSIRMMKECGLTAEDMYKPKVKI CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCC >Mature Secondary Structure MKKLSILAMGLLFVLTTACSVSGSGTLFDGKDSNKWKMTGDVSVQDDIMTLKGTDALAVL CCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEECCEECCCEEEEECCCEEEEE KNGKYKNFDLTLDLRTTPGGKGAVWFHTDPTLKKGYRIAINNDRADKVWWKMTGSLVSVR ECCCEECEEEEEEEEECCCCCEEEEEECCCCHHCCEEEEECCCCCCEEEEEECCCHHHHH NLTKSFVKEDQWFKMDIRVAGQEIDVNINGEPVVEYIQPTAPYRTDANAYALLSEGTFAI HHHHHHHCCCCEEEEEEEEECEEEEEEECCCCCEEEECCCCCCCCCCCEEEEEECCEEEE ESDGSGEIQIKNITVNVIDESTIDINAQLAEANDEQNDEIIKLHQSDFPVLDYHVHLKGG ECCCCCEEEEEEEEEEEEECCEEEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEEECCC LTKEVAAKQSRKTGINYTIAPNCGIGFPITNDQQVMDYLNEMRSQPFILGMQAEGREWIT CCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEE TFSPETLKEFDYVFTDALTFKDNKGRRTRLWIPEETWIENEEQYMDMIVDRICSVLEEPV ECCHHHHHHHHHHHEEEEEEECCCCCEEEEECCCHHHCCCHHHHHHHHHHHHHHHHCCCC DIYVNPCFLPSPMDKRFDEFWTEARMNRFVEALAKSGKALEINELYNIPNKAIIMKAKAA EEEECCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHCCCCCEEEEEEECC GVKFTFGSNNVTPNVSDLSYSIRMMKECGLTAEDMYKPKVKI CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA