Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150006683

Identifier: 150006683

GI number: 150006683

Start: 11320

End: 11790

Strand: Reverse

Name: 150006683

Synonym: BDI_0009

Alternate gene names: NA

Gene position: 11790-11320 (Counterclockwise)

Preceding gene: 150006684

Following gene: 150006678

Centisome position: 0.25

GC content: 40.34

Gene sequence:

>471_bases
TTGTATTCTAATAAAAGCATCCGGACAAAAAGGTTTCTTTTACGCAACGCAAACCTTACGTTTTCTGCTTCCTCCAGCAA
TAAACAGCCCAACTCAGGTAGAGATATTCAATGGAACGTACCGGGAATGACCATACTAGATGGCCCCCGATACAGCAATC
GGACCGTGGCAATACACACACCTTTCACTCTCATCTCGAAGGATAATCTCAAAGAATTAATCGATCACCTAGCCATGTTA
AAAATAAACAGACTTCATTTCACACAAGAAGTTCATGATACGACACCTGAAGGACAGCAAAAAATGAAGGATATGAACCT
GTATGCTAAATCCAAGAAGATCACGATCTCAAACGGAACAACACACACCCATGATATCATATCGTATCTCCCGTTCCAAG
CAGAGCTACTTATCTGGAAAGCAAATATCTCCGATTGCGATGAGGATAAAAAAGGTTATTCCAATATTTAG

Upstream 100 bases:

>100_bases
TCACCCCGGAAATAAAAATACAAGACAAACGAGCCAATATCATATTCCGCACAGACAAAGAACTAGCGGCCGAACATTAT
AAACTGAATATAGCCCCCTC

Downstream 100 bases:

>100_bases
CGCCCATCGCAGAAAGAAGCTGGTCTGGTAATTTGTTAGCCCATCGCCTCACGCAAGATATCGATCAAGATAGGCTTCAA
TCCGCTTACGAAACATTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MYSNKSIRTKRFLLRNANLTFSASSSNKQPNSGRDIQWNVPGMTILDGPRYSNRTVAIHTPFTLISKDNLKELIDHLAML
KINRLHFTQEVHDTTPEGQQKMKDMNLYAKSKKITISNGTTHTHDIISYLPFQAELLIWKANISDCDEDKKGYSNI

Sequences:

>Translated_156_residues
MYSNKSIRTKRFLLRNANLTFSASSSNKQPNSGRDIQWNVPGMTILDGPRYSNRTVAIHTPFTLISKDNLKELIDHLAML
KINRLHFTQEVHDTTPEGQQKMKDMNLYAKSKKITISNGTTHTHDIISYLPFQAELLIWKANISDCDEDKKGYSNI
>Mature_156_residues
MYSNKSIRTKRFLLRNANLTFSASSSNKQPNSGRDIQWNVPGMTILDGPRYSNRTVAIHTPFTLISKDNLKELIDHLAML
KINRLHFTQEVHDTTPEGQQKMKDMNLYAKSKKITISNGTTHTHDIISYLPFQAELLIWKANISDCDEDKKGYSNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17883; Mature: 17883

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSNKSIRTKRFLLRNANLTFSASSSNKQPNSGRDIQWNVPGMTILDGPRYSNRTVAIHT
CCCCCCCHHHEEEEECCCEEEEECCCCCCCCCCCEEEEECCCEEEECCCCCCCCEEEEEC
PFTLISKDNLKELIDHLAMLKINRLHFTQEVHDTTPEGQQKMKDMNLYAKSKKITISNGT
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCEEEEECCC
THTHDIISYLPFQAELLIWKANISDCDEDKKGYSNI
CCHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYSNKSIRTKRFLLRNANLTFSASSSNKQPNSGRDIQWNVPGMTILDGPRYSNRTVAIHT
CCCCCCCHHHEEEEECCCEEEEECCCCCCCCCCCEEEEECCCEEEECCCCCCCCEEEEEC
PFTLISKDNLKELIDHLAMLKINRLHFTQEVHDTTPEGQQKMKDMNLYAKSKKITISNGT
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCEEEEECCC
THTHDIISYLPFQAELLIWKANISDCDEDKKGYSNI
CCHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA