| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006673
Identifier: 150006673
GI number: 150006673
Start: 5161974
End: 5162861
Strand: Direct
Name: 150006673
Synonym: BVU_4194
Alternate gene names: NA
Gene position: 5161974-5162861 (Clockwise)
Preceding gene: 150006672
Following gene: NA
Centisome position: 99.98
GC content: 38.18
Gene sequence:
>888_bases ATGACGAAAGAGGTAAAAATAGGATTAATAGGCATCGCTGCATTGGCTATGCTGATCTTTGGTATCAACTACCTGAAAGG AATAAATATGTTCCAATCTGCCAATTACTATTATGTAGAATATACAAATATAAACGGATTAGCCGGATCAAGCCCCGTCT TTGCCAATGGTTATAAAGTAGGTACAGTAAGAAATATCAATTACAACTATGCAAAACCGGGACATGTCACAGTAGAAGTG GAAGTGGACAAGGAAATGCGTATCCCCAAAGGAAGTACAGGAGAACTGGTTACAGAAATGCTGGGAACGGTAAAGATGAA CTTACTCCTTAACTTTAATTCTACAGAATACTATCAACCGGGAGATACCCTGCCCGGCAAAACGAATGCGGGGCTCATGG GAGCCGCTGAAGAAAAGCTAGTTCCTCAAATAGAGCAGATGTTACCCAAAATGGATTCTATCCTATATTCATTAAATAAA ATATTAGCTGATCCTGCATTGAGTGCAACCTTGCACAACGCAGAAAAACTGACAGCCAATCTGGATGTGACAACACGTCA ATTAAACATGTTAATGCAAAAGGATCTTCCGCAACTTACTGGAAAATTAAACACAATTGCTGATAACTTCATTGCTATCA GCGACAATTTGAAAGGTATTGATTATGCTTCAACGTTCAATAAAATAGACTCCACTTTATATAATGTACAAATGCTGACA GAAAAACTCAATCGCAAGGACAACAGTATCGGATTGCTATTCAATGATCCTACTTTTTACCAAAATTTGAGTGCGACAAC AGCAAACGCTGCAACCTTATTGGAGGATTTGAAAGCGCATCCTAAACGTTATGTACATTTCTCTTTGTTTGGCAAGAAAG ATAAGTAA
Upstream 100 bases:
>100_bases GACGCTTTCATTATCGCTTTCAAAAACGGAGAGAAAATGAATGTGAACGAAGCCATCAAAGAATTTAAAAAGAATAGATA ATATAAAAGGTATAATTGAA
Downstream 100 bases:
>100_bases CAGATTTGCTAATTTAAAAACATTCTAAATAAGTCTACTCAACCATTTTTCCACTTATTTTCAGTAAATGACTGCAAATA GGGAAGAAATACCATGTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Related Protein; Secreted MCE Family Protein; Mce-Like Protein; ABC Transporter Permease; Mce4 Protein
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MTKEVKIGLIGIAALAMLIFGINYLKGINMFQSANYYYVEYTNINGLAGSSPVFANGYKVGTVRNINYNYAKPGHVTVEV EVDKEMRIPKGSTGELVTEMLGTVKMNLLLNFNSTEYYQPGDTLPGKTNAGLMGAAEEKLVPQIEQMLPKMDSILYSLNK ILADPALSATLHNAEKLTANLDVTTRQLNMLMQKDLPQLTGKLNTIADNFIAISDNLKGIDYASTFNKIDSTLYNVQMLT EKLNRKDNSIGLLFNDPTFYQNLSATTANAATLLEDLKAHPKRYVHFSLFGKKDK
Sequences:
>Translated_295_residues MTKEVKIGLIGIAALAMLIFGINYLKGINMFQSANYYYVEYTNINGLAGSSPVFANGYKVGTVRNINYNYAKPGHVTVEV EVDKEMRIPKGSTGELVTEMLGTVKMNLLLNFNSTEYYQPGDTLPGKTNAGLMGAAEEKLVPQIEQMLPKMDSILYSLNK ILADPALSATLHNAEKLTANLDVTTRQLNMLMQKDLPQLTGKLNTIADNFIAISDNLKGIDYASTFNKIDSTLYNVQMLT EKLNRKDNSIGLLFNDPTFYQNLSATTANAATLLEDLKAHPKRYVHFSLFGKKDK >Mature_294_residues TKEVKIGLIGIAALAMLIFGINYLKGINMFQSANYYYVEYTNINGLAGSSPVFANGYKVGTVRNINYNYAKPGHVTVEVE VDKEMRIPKGSTGELVTEMLGTVKMNLLLNFNSTEYYQPGDTLPGKTNAGLMGAAEEKLVPQIEQMLPKMDSILYSLNKI LADPALSATLHNAEKLTANLDVTTRQLNMLMQKDLPQLTGKLNTIADNFIAISDNLKGIDYASTFNKIDSTLYNVQMLTE KLNRKDNSIGLLFNDPTFYQNLSATTANAATLLEDLKAHPKRYVHFSLFGKKDK
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32670; Mature: 32539
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKEVKIGLIGIAALAMLIFGINYLKGINMFQSANYYYVEYTNINGLAGSSPVFANGYKV CCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCCCCCCCCCCEEECCEEE GTVRNINYNYAKPGHVTVEVEVDKEMRIPKGSTGELVTEMLGTVKMNLLLNFNSTEYYQP EEEEECCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHEEEEEEEEECCCCEECC GDTLPGKTNAGLMGAAEEKLVPQIEQMLPKMDSILYSLNKILADPALSATLHNAEKLTAN CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHEEEE LDVTTRQLNMLMQKDLPQLTGKLNTIADNFIAISDNLKGIDYASTFNKIDSTLYNVQMLT CCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH EKLNRKDNSIGLLFNDPTFYQNLSATTANAATLLEDLKAHPKRYVHFSLFGKKDK HHHCCCCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCC >Mature Secondary Structure TKEVKIGLIGIAALAMLIFGINYLKGINMFQSANYYYVEYTNINGLAGSSPVFANGYKV CCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCCCCCCCCCCEEECCEEE GTVRNINYNYAKPGHVTVEVEVDKEMRIPKGSTGELVTEMLGTVKMNLLLNFNSTEYYQP EEEEECCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHEEEEEEEEECCCCEECC GDTLPGKTNAGLMGAAEEKLVPQIEQMLPKMDSILYSLNKILADPALSATLHNAEKLTAN CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHEEEE LDVTTRQLNMLMQKDLPQLTGKLNTIADNFIAISDNLKGIDYASTFNKIDSTLYNVQMLT CCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH EKLNRKDNSIGLLFNDPTFYQNLSATTANAATLLEDLKAHPKRYVHFSLFGKKDK HHHCCCCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA