Click here to switch to the map view.

The map label for this gene is ycjY [C]

Identifier: 150006657

GI number: 150006657

Start: 5147132

End: 5148187

Strand: Direct

Name: ycjY [C]

Synonym: BVU_4178

Alternate gene names: 150006657

Gene position: 5147132-5148187 (Clockwise)

Preceding gene: 150006656

Following gene: 150006658

Centisome position: 99.69

GC content: 48.39

Gene sequence:

>1056_bases
ATGAAACGTACAACTATTTTAATGGCTGCTTTCCTCTGCCTCTTCAGCCTGACGGAAAGCCCGGCACAAAACACTCACAA
AAATATGGAACAGTTAAATCTGACACAGGAATGGGACAAGACGTACCCGAAAAGCGACAAGGTGAATCATAGCAAAGTGA
CTTTCATAAATCGTTACGGTATCACGCTCGCTGCCGACCTGTATGCACCGAAAACGATTTTCGGAGGTAAGCTGCCTGCT
ATTGCTGTCAGCGGTCCGTTTGGAGCTGTAAAGGAACAGTCGTCGGGGCTGTATGCCCAGACATTGGCCGAACGAGGATT
CCTGACGATTGCTTTTGATCCTTCATTTACTGGTGAAAGCGGTGGACAGCCTCGCAGCGTAGCTTCGCCAGACATCAACA
CCGAAGACTTCTCGGCGGCGGTGGATTACCTCGCGACACGTCCGGATGTGGATGCCGAACGAATCGGCATCATTGGCATT
TGTGGTTGGGGTGGTTTTGCTATCAATGCGGCTGCCAACGACACACGTATCAAGGCAACGGTAGCTTCCACAATGTACGA
CATTAGCCGCTGTACAGCAAACGGTTACTTCGATGCCGCTGACAATGCAGATGCACGTTACAAAATGCGTCAGGAGTTTA
ACGCCCAGCGCACGGAAGACTACCGTACCGACACTTATCCCCGCACCGTGACGAACCCGGAACCTACCGGTGATGCGCCG
CAGTTCATGAAGGATTATTATGATTATTACAAGACCGAACGAGGTTATCATCCTCGTTCCATCAACTCCGGTTTGGGCTG
GAACAAAACCTCCAATCTTGCATTTCTCAACGCACCTATCCTTGCGTATGCCGATGAAATCCGCAGTGCCGTGTTGCTCA
TTCATGGAGAAAAAGCTCACTCCCGCTATTTTAGTGAGGATACTTTCAAGAAGCTGAAAGGCGATAATAAAGAACTGATG
ATTATTCCCGATGCCGTACATACGGATTTATATGACCGGACAGACATTATTCCATTCGATAAGCTGGAGGAATTTTTCAA
AGAATACTTAAAATAG

Upstream 100 bases:

>100_bases
TACAATCAGTAATCCATCTACTGGCTTTTCCTGTAATCCGCTGTAATTTTGCACTATGAAAAGAAAACAAGAAACAATAA
AAATTTAAATTACATCGGTT

Downstream 100 bases:

>100_bases
AAGGCTTCAAGAAAAAGGAATTGCCTATATCCTGATTGGCTTCAGTTCGCGGACGCAGCAATGTGAACATGACTTTTAAA
ATTAATAATGACTGACAACT

Product: alpha/beta family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MKRTTILMAAFLCLFSLTESPAQNTHKNMEQLNLTQEWDKTYPKSDKVNHSKVTFINRYGITLAADLYAPKTIFGGKLPA
IAVSGPFGAVKEQSSGLYAQTLAERGFLTIAFDPSFTGESGGQPRSVASPDINTEDFSAAVDYLATRPDVDAERIGIIGI
CGWGGFAINAAANDTRIKATVASTMYDISRCTANGYFDAADNADARYKMRQEFNAQRTEDYRTDTYPRTVTNPEPTGDAP
QFMKDYYDYYKTERGYHPRSINSGLGWNKTSNLAFLNAPILAYADEIRSAVLLIHGEKAHSRYFSEDTFKKLKGDNKELM
IIPDAVHTDLYDRTDIIPFDKLEEFFKEYLK

Sequences:

>Translated_351_residues
MKRTTILMAAFLCLFSLTESPAQNTHKNMEQLNLTQEWDKTYPKSDKVNHSKVTFINRYGITLAADLYAPKTIFGGKLPA
IAVSGPFGAVKEQSSGLYAQTLAERGFLTIAFDPSFTGESGGQPRSVASPDINTEDFSAAVDYLATRPDVDAERIGIIGI
CGWGGFAINAAANDTRIKATVASTMYDISRCTANGYFDAADNADARYKMRQEFNAQRTEDYRTDTYPRTVTNPEPTGDAP
QFMKDYYDYYKTERGYHPRSINSGLGWNKTSNLAFLNAPILAYADEIRSAVLLIHGEKAHSRYFSEDTFKKLKGDNKELM
IIPDAVHTDLYDRTDIIPFDKLEEFFKEYLK
>Mature_351_residues
MKRTTILMAAFLCLFSLTESPAQNTHKNMEQLNLTQEWDKTYPKSDKVNHSKVTFINRYGITLAADLYAPKTIFGGKLPA
IAVSGPFGAVKEQSSGLYAQTLAERGFLTIAFDPSFTGESGGQPRSVASPDINTEDFSAAVDYLATRPDVDAERIGIIGI
CGWGGFAINAAANDTRIKATVASTMYDISRCTANGYFDAADNADARYKMRQEFNAQRTEDYRTDTYPRTVTNPEPTGDAP
QFMKDYYDYYKTERGYHPRSINSGLGWNKTSNLAFLNAPILAYADEIRSAVLLIHGEKAHSRYFSEDTFKKLKGDNKELM
IIPDAVHTDLYDRTDIIPFDKLEEFFKEYLK

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycjY [H]

Homologues:

Organism=Escherichia coli, GI221142683, Length=315, Percent_Identity=34.9206349206349, Blast_Score=159, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000383 [H]

Pfam domain/function: PF02129 Peptidase_S15 [H]

EC number: NA

Molecular weight: Translated: 39314; Mature: 39314

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTTILMAAFLCLFSLTESPAQNTHKNMEQLNLTQEWDKTYPKSDKVNHSKVTFINRYG
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCEEEEEEECC
ITLAADLYAPKTIFGGKLPAIAVSGPFGAVKEQSSGLYAQTLAERGFLTIAFDPSFTGES
CEEEECCCCCCHHCCCCCCEEEECCCCCCHHHCCCCHHHHHHHHCCCEEEEECCCCCCCC
GGQPRSVASPDINTEDFSAAVDYLATRPDVDAERIGIIGICGWGGFAINAAANDTRIKAT
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHEEEEEEECCCCEEEECCCCCCEEEHH
VASTMYDISRCTANGYFDAADNADARYKMRQEFNAQRTEDYRTDTYPRTVTNPEPTGDAP
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCH
QFMKDYYDYYKTERGYHPRSINSGLGWNKTSNLAFLNAPILAYADEIRSAVLLIHGEKAH
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCEEEEEECCHHH
SRYFSEDTFKKLKGDNKELMIIPDAVHTDLYDRTDIIPFDKLEEFFKEYLK
HHHCCHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKRTTILMAAFLCLFSLTESPAQNTHKNMEQLNLTQEWDKTYPKSDKVNHSKVTFINRYG
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCEEEEEEECC
ITLAADLYAPKTIFGGKLPAIAVSGPFGAVKEQSSGLYAQTLAERGFLTIAFDPSFTGES
CEEEECCCCCCHHCCCCCCEEEECCCCCCHHHCCCCHHHHHHHHCCCEEEEECCCCCCCC
GGQPRSVASPDINTEDFSAAVDYLATRPDVDAERIGIIGICGWGGFAINAAANDTRIKAT
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHEEEEEEECCCCEEEECCCCCCEEEHH
VASTMYDISRCTANGYFDAADNADARYKMRQEFNAQRTEDYRTDTYPRTVTNPEPTGDAP
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCH
QFMKDYYDYYKTERGYHPRSINSGLGWNKTSNLAFLNAPILAYADEIRSAVLLIHGEKAH
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCEEEEEECCHHH
SRYFSEDTFKKLKGDNKELMIIPDAVHTDLYDRTDIIPFDKLEEFFKEYLK
HHHCCHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1427017; 10984043 [H]