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The map label for this gene is ompA [C]

Identifier: 150006545

GI number: 150006545

Start: 5000850

End: 5001944

Strand: Direct

Name: ompA [C]

Synonym: BVU_4065

Alternate gene names: 150006545

Gene position: 5000850-5001944 (Clockwise)

Preceding gene: 150006544

Following gene: 150006548

Centisome position: 96.86

GC content: 39.36

Gene sequence:

>1095_bases
ATGAAATATAAATTTTTAACCCTGTCTTTATTATTGGCAGGCGTATGTGCAACAACAATTAAAGCACAAGAAACTAATTA
TTATACTCCGAAATGGAGCGATAATATTTTTATTAGCGTAGGTGGTGGTATACACTCTGTAGCAAACGATGGATTTAACA
GAATATCTCCGAATTTCAGTATTTCGCTTGGTAAATATATTACTCCGACTTGGGGAATACGCGGTCAAGTGAACGGAATA
TGGCAAAGTTTATGTTTACAAGAAATTGGCTATCACGAACACAACAAGAACTATGTTGGAGCGAATATTGATGCAATGGT
AAACTTGTCATCTTTATTTGCAGGCGCTAATCCTAACCGTTTCTTTGAAGTTTATGGTTTTGTAGGTCCTCAGTTATCTG
TTGCAAAATCTGCAAATGTTGTTTATACTTACGATGGCAACACAGGTGAAAGAACTGGTGTTTCTACATCCGGTGAAGCA
AAAGCTAAAGCTCGTATAGGCGCTTCTGCCGGTTTAGGTTTAAAGTTTAACTTAAACAATAAATGGGCTATCGATGTTGA
AGCTCGTGGTGCAATCGCTCCTTCAATCTTCGGTAACATCAGCGATCACCGTAAGGCAGAAGGTACAGGTATGATCACAG
CAGGTGTAAGCTATACTTTTGGCGGCAAGAAGTTTGCTAAAGTTGAAGACCGTGTAGTAGAAAAAGAAGTGATCAAGGAA
GTGGTTCGTGAAGTTCCGAAAGAAGTAGTCAAGGAAGTGATTAAAGAAGTTCCTAGCGCTGCAGAAGTTGCTATCTTCTT
CAAGATCGGTAAAGCAAAAATCAGTTCGGAAGGTATGGTTAATGTACAGTTAATGGCTAAAGCTATCAAAGCTAATCCTA
ACGCCAAGTACAAAATCGCAGGCTTCGCTGATAAAGCTACAGGATCTGCTTCATTCAACCAGACTTTGTCTGAAAAACGT
GCTCAGGCTGTTTACGATGCATTGGTTGCAGAAGGCGTAAAAGAAAGCCAACTTGAAAAAGTTGCTATGGGTGGAACAGA
CAACATGTTTGGCAAGAACTATCTGAACCGCGTAGTTATTCTGGAAGTAAAATAA

Upstream 100 bases:

>100_bases
GGTCATGGACATGGAGATGACAGCAATGCCGGTGGTGGTATTATTATTGCAGACTAATAGCCAGTTAATATTTTGATTTA
ATCACTAAAAACATAATATA

Downstream 100 bases:

>100_bases
TCATTGCTACCTGATAAAACTCTGATAAATTAAAGAAGGGGGTATCGTAACAAACGATGCTCCCTCTTTTTTTCTTCAAC
TGCATTTTTAATCACATAAG

Product: major outer membrane protein OmpA

Products: NA

Alternate protein names: Omp40; PG33 [H]

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MKYKFLTLSLLLAGVCATTIKAQETNYYTPKWSDNIFISVGGGIHSVANDGFNRISPNFSISLGKYITPTWGIRGQVNGI
WQSLCLQEIGYHEHNKNYVGANIDAMVNLSSLFAGANPNRFFEVYGFVGPQLSVAKSANVVYTYDGNTGERTGVSTSGEA
KAKARIGASAGLGLKFNLNNKWAIDVEARGAIAPSIFGNISDHRKAEGTGMITAGVSYTFGGKKFAKVEDRVVEKEVIKE
VVREVPKEVVKEVIKEVPSAAEVAIFFKIGKAKISSEGMVNVQLMAKAIKANPNAKYKIAGFADKATGSASFNQTLSEKR
AQAVYDALVAEGVKESQLEKVAMGGTDNMFGKNYLNRVVILEVK

Sequences:

>Translated_364_residues
MKYKFLTLSLLLAGVCATTIKAQETNYYTPKWSDNIFISVGGGIHSVANDGFNRISPNFSISLGKYITPTWGIRGQVNGI
WQSLCLQEIGYHEHNKNYVGANIDAMVNLSSLFAGANPNRFFEVYGFVGPQLSVAKSANVVYTYDGNTGERTGVSTSGEA
KAKARIGASAGLGLKFNLNNKWAIDVEARGAIAPSIFGNISDHRKAEGTGMITAGVSYTFGGKKFAKVEDRVVEKEVIKE
VVREVPKEVVKEVIKEVPSAAEVAIFFKIGKAKISSEGMVNVQLMAKAIKANPNAKYKIAGFADKATGSASFNQTLSEKR
AQAVYDALVAEGVKESQLEKVAMGGTDNMFGKNYLNRVVILEVK
>Mature_364_residues
MKYKFLTLSLLLAGVCATTIKAQETNYYTPKWSDNIFISVGGGIHSVANDGFNRISPNFSISLGKYITPTWGIRGQVNGI
WQSLCLQEIGYHEHNKNYVGANIDAMVNLSSLFAGANPNRFFEVYGFVGPQLSVAKSANVVYTYDGNTGERTGVSTSGEA
KAKARIGASAGLGLKFNLNNKWAIDVEARGAIAPSIFGNISDHRKAEGTGMITAGVSYTFGGKKFAKVEDRVVEKEVIKE
VVREVPKEVVKEVIKEVPSAAEVAIFFKIGKAKISSEGMVNVQLMAKAIKANPNAKYKIAGFADKATGSASFNQTLSEKR
AQAVYDALVAEGVKESQLEKVAMGGTDNMFGKNYLNRVVILEVK

Specific function: May have porin activity and function in peptidoglycan binding [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 39291; Mature: 39291

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKFLTLSLLLAGVCATTIKAQETNYYTPKWSDNIFISVGGGIHSVANDGFNRISPNFS
CCEEEHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEECCCHHHHHCCCCHHCCCCEE
ISLGKYITPTWGIRGQVNGIWQSLCLQEIGYHEHNKNYVGANIDAMVNLSSLFAGANPNR
EEECCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCHHHEEEHHHHHCCCCCCC
FFEVYGFVGPQLSVAKSANVVYTYDGNTGERTGVSTSGEAKAKARIGASAGLGLKFNLNN
EEEEEECCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHEEECCCCCCEEEEECCC
KWAIDVEARGAIAPSIFGNISDHRKAEGTGMITAGVSYTFGGKKFAKVEDRVVEKEVIKE
EEEEEEECCCCCCHHHHCCCCHHCCCCCCEEEEECEEEECCCCCHHHHHHHHHHHHHHHH
VVREVPKEVVKEVIKEVPSAAEVAIFFKIGKAKISSEGMVNVQLMAKAIKANPNAKYKIA
HHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEECCCCEEEHHHHHHHHHCCCCCEEEEE
GFADKATGSASFNQTLSEKRAQAVYDALVAEGVKESQLEKVAMGGTDNMFGKNYLNRVVI
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHCCEEEE
LEVK
EEEC
>Mature Secondary Structure
MKYKFLTLSLLLAGVCATTIKAQETNYYTPKWSDNIFISVGGGIHSVANDGFNRISPNFS
CCEEEHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEECCCHHHHHCCCCHHCCCCEE
ISLGKYITPTWGIRGQVNGIWQSLCLQEIGYHEHNKNYVGANIDAMVNLSSLFAGANPNR
EEECCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCHHHEEEHHHHHCCCCCCC
FFEVYGFVGPQLSVAKSANVVYTYDGNTGERTGVSTSGEAKAKARIGASAGLGLKFNLNN
EEEEEECCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHEEECCCCCCEEEEECCC
KWAIDVEARGAIAPSIFGNISDHRKAEGTGMITAGVSYTFGGKKFAKVEDRVVEKEVIKE
EEEEEEECCCCCCHHHHCCCCHHCCCCCCEEEEECEEEECCCCCHHHHHHHHHHHHHHHH
VVREVPKEVVKEVIKEVPSAAEVAIFFKIGKAKISSEGMVNVQLMAKAIKANPNAKYKIA
HHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEECCCCEEEHHHHHHHHHCCCCCEEEEE
GFADKATGSASFNQTLSEKRAQAVYDALVAEGVKESQLEKVAMGGTDNMFGKNYLNRVVI
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHCCEEEE
LEVK
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11457538; 12949112; 11532011 [H]