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The map label for this gene is asdII [H]

Identifier: 150006534

GI number: 150006534

Start: 4987919

End: 4989457

Strand: Reverse

Name: asdII [H]

Synonym: BVU_4054

Alternate gene names: 150006534

Gene position: 4989457-4987919 (Counterclockwise)

Preceding gene: 150006536

Following gene: 150006532

Centisome position: 96.64

GC content: 44.64

Gene sequence:

>1539_bases
ATGAAAAATGCACTTATGGGCTTGGCATTGTTCGCTGCAATGCCGGTATTTGCCCAACAGAAAGCGACTATCAATGTACA
TCCCGAGCAAGGGAAAGAAATCATCAGTAAACATATTTACGGGCAATTTGCAGAGCATTTGGGAACCTGTATCTATGGAG
GCTTGTGGGTAGGTGAGGATTCTAAAATTCCCAATACCCAAGGCTATCGTAATGATGTGCTTCAGGCATTGAAAGACTTG
AAAGTGCCGGTGCTTCGTTGGCCGGGCGGATGTTTTGCCGATGAATATCATTGGATGGATGGTATCGGTCCGAAAGAGAA
CCGCCCCCGAATGGTCAATAACAATTGGGGAGGTACAGTGGAAGATAATAGTTTCGGAACACATGAATTTCTGAACTTGT
GTGAGCTGATAGGTTGTGAGCCTTATATCAGCGGTAATGTAGGAAGTGGGAGTGTGGAAGAAATGGCGAAATGGGTGGAA
TACATGACTTCCGAACAAGGTAGCCCGATGGCGAAACTGCGTAAGGAGAACGGTCGTGAAAAACCATGGAAAGTGAAATT
CTTTGGGGTAGGTAATGAAAGTTGGGGATGCGGAGGCAGTATGCGTCCTGAATATTATGCAGACTTGTACCGCCGTTATT
CCACTTATTGTCGTGACTATGATGGCAATCACTTGTTCAAGATTGCAAGTGGTGCCAGTGATTATGACTATAACTGGACA
GAAGTACTGATGAAGAATGTAGGTCACCGTATGGCCGGTGTGTCTTTACATTATTATACAGTGATGGGATGGAGTGGAAG
CAAAGGATCGGCTACACAGTTCACTGATGATGATTATTATTGGACTATGGGCAAATGTCTGGAAATAGAACCGGTGCTGA
AGAAGCATATGGCAATTATGGATAAATATGATCCGAAGAAGCAAATCGGTTTGATGGTGGACGAGTGGGGAACCTGGTGG
GATGAAGAGCCGGGAACTGTCCGTGGACATCTGTATCAGCAGAACACGTTGCGCGATGCTTTCGTGGCCTCTTTGACACT
GGATGTTTTCCATAAATATACGGATCGCATCAAGATGACAAACATTGCCCAGATTGCCAATGTGCTTCAGTCTATGATTT
TGACAAAGGACGACAAGATGGTTCTGACACCGACTTACCATGTCTTTGAAATGTATAAAGTGCATCAGGATGCTACTTAT
CTTCCTTTGGAACTGAACTGTGAACGCAAGATTGTACGCGACGACCGTATTGTCCCGATGGTAAGTGCTACAGCTTCACG
GGATGCAAACGGTTTGATTCATATTTCCTTGTCTAATGTGGATTTGCAGGAATCGCAGGAAATAGAGTTGAACTTGGGTG
AGGTAAAGGCCAAGAGTGTTACCGGCCGTATTCTGACTGCTAACAATATAGGTGATTACAATAGTTTCGAGAAACCGAAT
GTGGTTGCCCCGAAAGAATTTACCGGAGCAAAGGTCAATAAAGGAAGCTTGAAAGTGACTCTTCCTGCCAAGTCTATCGT
AGTGCTGGAAGTGAAATAA

Upstream 100 bases:

>100_bases
ACAATTTTGTCCACTATCCGGTTGATGTAAAATGTGTAAATTTGACCAAACGAAAAACGAGAACGCAAATATAGTATAAT
TAATTATTTTATTTTTAATC

Downstream 100 bases:

>100_bases
AACCCGTACGTTCGTGTGCCCCCACACATACGTATGTGTGGGGGTATACATACGTATGTATCGTTTCATGCCTGCGTATG
TGTGATAGACTACGGTAATT

Product: alpha-L-arabinofuranosidase

Products: NA

Alternate protein names: Arabinosidase 2 [H]

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MKNALMGLALFAAMPVFAQQKATINVHPEQGKEIISKHIYGQFAEHLGTCIYGGLWVGEDSKIPNTQGYRNDVLQALKDL
KVPVLRWPGGCFADEYHWMDGIGPKENRPRMVNNNWGGTVEDNSFGTHEFLNLCELIGCEPYISGNVGSGSVEEMAKWVE
YMTSEQGSPMAKLRKENGREKPWKVKFFGVGNESWGCGGSMRPEYYADLYRRYSTYCRDYDGNHLFKIASGASDYDYNWT
EVLMKNVGHRMAGVSLHYYTVMGWSGSKGSATQFTDDDYYWTMGKCLEIEPVLKKHMAIMDKYDPKKQIGLMVDEWGTWW
DEEPGTVRGHLYQQNTLRDAFVASLTLDVFHKYTDRIKMTNIAQIANVLQSMILTKDDKMVLTPTYHVFEMYKVHQDATY
LPLELNCERKIVRDDRIVPMVSATASRDANGLIHISLSNVDLQESQEIELNLGEVKAKSVTGRILTANNIGDYNSFEKPN
VVAPKEFTGAKVNKGSLKVTLPAKSIVVLEVK

Sequences:

>Translated_512_residues
MKNALMGLALFAAMPVFAQQKATINVHPEQGKEIISKHIYGQFAEHLGTCIYGGLWVGEDSKIPNTQGYRNDVLQALKDL
KVPVLRWPGGCFADEYHWMDGIGPKENRPRMVNNNWGGTVEDNSFGTHEFLNLCELIGCEPYISGNVGSGSVEEMAKWVE
YMTSEQGSPMAKLRKENGREKPWKVKFFGVGNESWGCGGSMRPEYYADLYRRYSTYCRDYDGNHLFKIASGASDYDYNWT
EVLMKNVGHRMAGVSLHYYTVMGWSGSKGSATQFTDDDYYWTMGKCLEIEPVLKKHMAIMDKYDPKKQIGLMVDEWGTWW
DEEPGTVRGHLYQQNTLRDAFVASLTLDVFHKYTDRIKMTNIAQIANVLQSMILTKDDKMVLTPTYHVFEMYKVHQDATY
LPLELNCERKIVRDDRIVPMVSATASRDANGLIHISLSNVDLQESQEIELNLGEVKAKSVTGRILTANNIGDYNSFEKPN
VVAPKEFTGAKVNKGSLKVTLPAKSIVVLEVK
>Mature_512_residues
MKNALMGLALFAAMPVFAQQKATINVHPEQGKEIISKHIYGQFAEHLGTCIYGGLWVGEDSKIPNTQGYRNDVLQALKDL
KVPVLRWPGGCFADEYHWMDGIGPKENRPRMVNNNWGGTVEDNSFGTHEFLNLCELIGCEPYISGNVGSGSVEEMAKWVE
YMTSEQGSPMAKLRKENGREKPWKVKFFGVGNESWGCGGSMRPEYYADLYRRYSTYCRDYDGNHLFKIASGASDYDYNWT
EVLMKNVGHRMAGVSLHYYTVMGWSGSKGSATQFTDDDYYWTMGKCLEIEPVLKKHMAIMDKYDPKKQIGLMVDEWGTWW
DEEPGTVRGHLYQQNTLRDAFVASLTLDVFHKYTDRIKMTNIAQIANVLQSMILTKDDKMVLTPTYHVFEMYKVHQDATY
LPLELNCERKIVRDDRIVPMVSATASRDANGLIHISLSNVDLQESQEIELNLGEVKAKSVTGRILTANNIGDYNSFEKPN
VVAPKEFTGAKVNKGSLKVTLPAKSIVVLEVK

Specific function: Unknown

COG id: COG3534

COG function: function code G; Alpha-L-arabinofuranosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010720
- InterPro:   IPR013780
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF06964 Alpha-L-AF_C [H]

EC number: =3.2.1.55 [H]

Molecular weight: Translated: 57899; Mature: 57899

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNALMGLALFAAMPVFAQQKATINVHPEQGKEIISKHIYGQFAEHLGTCIYGGLWVGED
CCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC
SKIPNTQGYRNDVLQALKDLKVPVLRWPGGCFADEYHWMDGIGPKENRPRMVNNNWGGTV
CCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEE
EDNSFGTHEFLNLCELIGCEPYISGNVGSGSVEEMAKWVEYMTSEQGSPMAKLRKENGRE
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
KPWKVKFFGVGNESWGCGGSMRPEYYADLYRRYSTYCRDYDGNHLFKIASGASDYDYNWT
CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHH
EVLMKNVGHRMAGVSLHYYTVMGWSGSKGSATQFTDDDYYWTMGKCLEIEPVLKKHMAIM
HHHHHHHCCHHHCEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCEEEECHHHHHHHHHH
DKYDPKKQIGLMVDEWGTWWDEEPGTVRGHLYQQNTLRDAFVASLTLDVFHKYTDRIKMT
HCCCCHHHHCEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHEEHH
NIAQIANVLQSMILTKDDKMVLTPTYHVFEMYKVHQDATYLPLELNCERKIVRDDRIVPM
HHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCCEEEEEEECCCHHHHCCCCEEEE
VSATASRDANGLIHISLSNVDLQESQEIELNLGEVKAKSVTGRILTANNIGDYNSFEKPN
EECCCCCCCCCEEEEEECCCCCCCCCEEEEECCCEEECCCCEEEEEECCCCCCCCCCCCC
VVAPKEFTGAKVNKGSLKVTLPAKSIVVLEVK
CCCCCCCCCCEECCCEEEEEECCCEEEEEEEC
>Mature Secondary Structure
MKNALMGLALFAAMPVFAQQKATINVHPEQGKEIISKHIYGQFAEHLGTCIYGGLWVGED
CCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC
SKIPNTQGYRNDVLQALKDLKVPVLRWPGGCFADEYHWMDGIGPKENRPRMVNNNWGGTV
CCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEE
EDNSFGTHEFLNLCELIGCEPYISGNVGSGSVEEMAKWVEYMTSEQGSPMAKLRKENGRE
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
KPWKVKFFGVGNESWGCGGSMRPEYYADLYRRYSTYCRDYDGNHLFKIASGASDYDYNWT
CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHH
EVLMKNVGHRMAGVSLHYYTVMGWSGSKGSATQFTDDDYYWTMGKCLEIEPVLKKHMAIM
HHHHHHHCCHHHCEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCEEEECHHHHHHHHHH
DKYDPKKQIGLMVDEWGTWWDEEPGTVRGHLYQQNTLRDAFVASLTLDVFHKYTDRIKMT
HCCCCHHHHCEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHEEHH
NIAQIANVLQSMILTKDDKMVLTPTYHVFEMYKVHQDATYLPLELNCERKIVRDDRIVPM
HHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCCEEEEEEECCCHHHHCCCCEEEE
VSATASRDANGLIHISLSNVDLQESQEIELNLGEVKAKSVTGRILTANNIGDYNSFEKPN
EECCCCCCCCCEEEEEECCCCCCCCCEEEEECCCEEECCCCEEEEEECCCCCCCCCCCCC
VVAPKEFTGAKVNKGSLKVTLPAKSIVVLEVK
CCCCCCCCCCEECCCEEEEEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA