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The map label for this gene is 150006533

Identifier: 150006533

GI number: 150006533

Start: 4986972

End: 4987829

Strand: Direct

Name: 150006533

Synonym: BVU_4053

Alternate gene names: NA

Gene position: 4986972-4987829 (Clockwise)

Preceding gene: 150006529

Following gene: 150006535

Centisome position: 96.59

GC content: 42.77

Gene sequence:

>858_bases
ATGAGCGCAAAGAAAAAGAAACAATCCAATAGTCCCCTGAGAGTCATCATTATTTTAGTATTACTGGGACTTTTGGCATA
TAAACATCAATTGTTTGACGGGAAACTGCTTGAAAATATCCCCACTATCGAAAGCAATGAAGAAAAGCCAGAAATACTGA
CCTCGCCCCAACATGGCGGTGCATTGGAAATTCCGATGATACAATCAAGTACAGGCGGCCAGATTCTGAAACGTAAAGGA
TATACCCTGTCTTATAATGCCGATTACAAAACTCCACAATGGGTGGCGTGGGAACTTACTAAAAAAGAAACAAAAGGAAA
AGAAGGGCGAACAAATAAATTCTTGCCCGACCCGGACGTACGTGGAGCCAAAGCATATACGGGAGATTATACAAAATCAG
GATACGACCGGGGACACATGGCCCCTGCCGCCGATATGAAATGGAACAAACAAGCCATGGAAGAATCTTTTTATATGAGC
AACATTTGTCCGCAAAATCCGAATCTGAACCGCGGCGACTGGAATGACCTGGAGGAAAAGTCACGCCAATGGGCAAAAAA
ATATGGAGCCGTGTATATTGCCTGCGGACCTATATATGATACTAAACGCCCCAAAAGAATTGGCAACAATAAAGTGGCAG
TCCCCCATGCTTTCTATAAAGTCATATTGATAAATGATAAGAAAAATCCGCAAGCCATAGGATTTATTTTCCCCAACAGC
GCCGGACATAAGCCACTGAAGAAATATATGGTAACAGTAGACAGCGTAGAGAAAAGAACGGATATCGATTTCTTCCCTGC
CCTGCCGGATGAAATAGAAAACAGAATCGAAGCGGAGTTGGTACAAGAATTACCGTAG

Upstream 100 bases:

>100_bases
ATAGCATGTCAGTATTATTAAAATTTACAGCTATATAATGGACAAAGATAATGTATTTTTATATTTTATTCTATCTTTGC
ACCCCTAAAACAGAACAAAT

Downstream 100 bases:

>100_bases
TCTATCACACATACGCAGGCATGAAACGATACATACGTATGTATACCCCCACACATACGTATGTGTGGGGGCACACGAAC
GTACGGGTTTTATTTCACTT

Product: putative endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSAKKKKQSNSPLRVIIILVLLGLLAYKHQLFDGKLLENIPTIESNEEKPEILTSPQHGGALEIPMIQSSTGGQILKRKG
YTLSYNADYKTPQWVAWELTKKETKGKEGRTNKFLPDPDVRGAKAYTGDYTKSGYDRGHMAPAADMKWNKQAMEESFYMS
NICPQNPNLNRGDWNDLEEKSRQWAKKYGAVYIACGPIYDTKRPKRIGNNKVAVPHAFYKVILINDKKNPQAIGFIFPNS
AGHKPLKKYMVTVDSVEKRTDIDFFPALPDEIENRIEAELVQELP

Sequences:

>Translated_285_residues
MSAKKKKQSNSPLRVIIILVLLGLLAYKHQLFDGKLLENIPTIESNEEKPEILTSPQHGGALEIPMIQSSTGGQILKRKG
YTLSYNADYKTPQWVAWELTKKETKGKEGRTNKFLPDPDVRGAKAYTGDYTKSGYDRGHMAPAADMKWNKQAMEESFYMS
NICPQNPNLNRGDWNDLEEKSRQWAKKYGAVYIACGPIYDTKRPKRIGNNKVAVPHAFYKVILINDKKNPQAIGFIFPNS
AGHKPLKKYMVTVDSVEKRTDIDFFPALPDEIENRIEAELVQELP
>Mature_284_residues
SAKKKKQSNSPLRVIIILVLLGLLAYKHQLFDGKLLENIPTIESNEEKPEILTSPQHGGALEIPMIQSSTGGQILKRKGY
TLSYNADYKTPQWVAWELTKKETKGKEGRTNKFLPDPDVRGAKAYTGDYTKSGYDRGHMAPAADMKWNKQAMEESFYMSN
ICPQNPNLNRGDWNDLEEKSRQWAKKYGAVYIACGPIYDTKRPKRIGNNKVAVPHAFYKVILINDKKNPQAIGFIFPNSA
GHKPLKKYMVTVDSVEKRTDIDFFPALPDEIENRIEAELVQELP

Specific function: Unknown

COG id: COG1864

COG function: function code F; DNA/RNA endonuclease G, NUC1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA/RNA non-specific endonuclease family [H]

Homologues:

Organism=Homo sapiens, GI53759134, Length=208, Percent_Identity=33.1730769230769, Blast_Score=129, Evalue=3e-30,
Organism=Homo sapiens, GI224451073, Length=237, Percent_Identity=35.0210970464135, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI224451075, Length=187, Percent_Identity=38.5026737967914, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17505967, Length=205, Percent_Identity=33.6585365853659, Blast_Score=107, Evalue=8e-24,
Organism=Saccharomyces cerevisiae, GI6322253, Length=216, Percent_Identity=32.8703703703704, Blast_Score=110, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24581065, Length=207, Percent_Identity=31.4009661835749, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI20129899, Length=210, Percent_Identity=32.8571428571429, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI28571642, Length=210, Percent_Identity=25.7142857142857, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018524
- InterPro:   IPR001604
- InterPro:   IPR020821 [H]

Pfam domain/function: PF01223 Endonuclease_NS [H]

EC number: NA

Molecular weight: Translated: 32330; Mature: 32199

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS01070 NUCLEASE_NON_SPEC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKKKKQSNSPLRVIIILVLLGLLAYKHQLFDGKLLENIPTIESNEEKPEILTSPQHGG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEECCCCCCC
ALEIPMIQSSTGGQILKRKGYTLSYNADYKTPQWVAWELTKKETKGKEGRTNKFLPDPDV
EEEEEEEECCCCCHHHHHCCCEEEECCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCC
RGAKAYTGDYTKSGYDRGHMAPAADMKWNKQAMEESFYMSNICPQNPNLNRGDWNDLEEK
CCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
SRQWAKKYGAVYIACGPIYDTKRPKRIGNNKVAVPHAFYKVILINDKKNPQAIGFIFPNS
HHHHHHHHCEEEEEECCCCCCCCCHHCCCCCEECCCEEEEEEEEECCCCCCEEEEEECCC
AGHKPLKKYMVTVDSVEKRTDIDFFPALPDEIENRIEAELVQELP
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAKKKKQSNSPLRVIIILVLLGLLAYKHQLFDGKLLENIPTIESNEEKPEILTSPQHGG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEECCCCCCC
ALEIPMIQSSTGGQILKRKGYTLSYNADYKTPQWVAWELTKKETKGKEGRTNKFLPDPDV
EEEEEEEECCCCCHHHHHCCCEEEECCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCC
RGAKAYTGDYTKSGYDRGHMAPAADMKWNKQAMEESFYMSNICPQNPNLNRGDWNDLEEK
CCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
SRQWAKKYGAVYIACGPIYDTKRPKRIGNNKVAVPHAFYKVILINDKKNPQAIGFIFPNS
HHHHHHHHCEEEEEECCCCCCCCCHHCCCCCEECCCEEEEEEEEECCCCCCEEEEEECCC
AGHKPLKKYMVTVDSVEKRTDIDFFPALPDEIENRIEAELVQELP
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]