| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006502
Identifier: 150006502
GI number: 150006502
Start: 4955338
End: 4956312
Strand: Reverse
Name: 150006502
Synonym: BVU_4022
Alternate gene names: NA
Gene position: 4956312-4955338 (Counterclockwise)
Preceding gene: 150006503
Following gene: 150006501
Centisome position: 95.99
GC content: 41.64
Gene sequence:
>975_bases GTGACTTTTGGTCTTCTTCACCGATGGCTGACAGATATGGGCATGACCATTTCTAAAAATACGTTGCGCAACTGGCTTAC GAAGGACAAGACATACCTGGACGAACTGGTCTGTGTATTGAAGTCTATAGCTTTGGAAAAAGACTCGATAGTGAACTGCG ATGAGACCTGGTGTAAAGTGCGTAAATATGATCACTATAAGAAGTGCTACATTGGGGTTCTAGTCAACAAGGCTCGGAAA ACAGCCATTTTCTTCTATGAGAATGGCTCGTGTGGTCGTGATGTACTTACAGACTTTTTGGGCGATGCAGAATTGAAGAG TATTATGTCCGACGGATACAATGCTTATGTATTTATCGGCAATGAGCTGAAATTAGGCCGGTTTAAAGATACTGTACACC AAGTTTGTATGTCTCATGCCAAAAACAAGTTTGTCAAGGCTTCCAATCAGGGTGGTGAACCGACTGCAGAACGCTTTTCC GAAATTTTAAAGGAGTTCTTTATGAGGGATCGTGAATACGATGATGCCGGATTAACTCCAAAAGAAAGGTTTCAAGAAAG GCAAAGCTTGGAAACTAAGGAACTCCTGATAGAGCTGCGTAGTTTGTTAGATAGTGAACAGTCAAAGGATTCAGAATTTA GAAGCCGGTATTATAAAGAAGCTCTCAATTATCTGAACCGGTTCAGGAAAGAGATCTTTGCTTACTTGGATGATGGTGAA TTACCGATAGACAACAACCTGGCTGAGCGAACCATTCGAAAGCTGACCACTCAACGCAACAATTCACTTCATTATGGTAG TGATGCCGGTGCAGAGATGGCAGCAACTTATCACAGTGTGATAGGAACGGTAAAGCTTCTTGGCAGTTCTATCTGGAACT TCATCGGAACTTTTTTCAAAAATATCTTTAACGGATGCAGGGATTATGTTAACATGGTTCCTGACAAAATCACTTTGGCT ACCAGCCAATGTTAA
Upstream 100 bases:
>100_bases CCCTTCTGAAGGCCATCCTGAGGTGATGACTAGATTCGAGGGTACTAAAGCCACTCCTGAATTTCTGTAGGCTATTGCCT ACGAAGTTTATGTAAAGAAT
Downstream 100 bases:
>100_bases ATTCAAGACTAATTAATTAACAAAACTCGGTTTAGGGCACTGAAAAGTGCCCTTTCGAAGGGGGATGCCCTAAATTGAGT GCTTACAACAAGTCATAAAA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTFGLLHRWLTDMGMTISKNTLRNWLTKDKTYLDELVCVLKSIALEKDSIVNCDETWCKVRKYDHYKKCYIGVLVNKARK TAIFFYENGSCGRDVLTDFLGDAELKSIMSDGYNAYVFIGNELKLGRFKDTVHQVCMSHAKNKFVKASNQGGEPTAERFS EILKEFFMRDREYDDAGLTPKERFQERQSLETKELLIELRSLLDSEQSKDSEFRSRYYKEALNYLNRFRKEIFAYLDDGE LPIDNNLAERTIRKLTTQRNNSLHYGSDAGAEMAATYHSVIGTVKLLGSSIWNFIGTFFKNIFNGCRDYVNMVPDKITLA TSQC
Sequences:
>Translated_324_residues MTFGLLHRWLTDMGMTISKNTLRNWLTKDKTYLDELVCVLKSIALEKDSIVNCDETWCKVRKYDHYKKCYIGVLVNKARK TAIFFYENGSCGRDVLTDFLGDAELKSIMSDGYNAYVFIGNELKLGRFKDTVHQVCMSHAKNKFVKASNQGGEPTAERFS EILKEFFMRDREYDDAGLTPKERFQERQSLETKELLIELRSLLDSEQSKDSEFRSRYYKEALNYLNRFRKEIFAYLDDGE LPIDNNLAERTIRKLTTQRNNSLHYGSDAGAEMAATYHSVIGTVKLLGSSIWNFIGTFFKNIFNGCRDYVNMVPDKITLA TSQC >Mature_323_residues TFGLLHRWLTDMGMTISKNTLRNWLTKDKTYLDELVCVLKSIALEKDSIVNCDETWCKVRKYDHYKKCYIGVLVNKARKT AIFFYENGSCGRDVLTDFLGDAELKSIMSDGYNAYVFIGNELKLGRFKDTVHQVCMSHAKNKFVKASNQGGEPTAERFSE ILKEFFMRDREYDDAGLTPKERFQERQSLETKELLIELRSLLDSEQSKDSEFRSRYYKEALNYLNRFRKEIFAYLDDGEL PIDNNLAERTIRKLTTQRNNSLHYGSDAGAEMAATYHSVIGTVKLLGSSIWNFIGTFFKNIFNGCRDYVNMVPDKITLAT SQC
Specific function: Unknown
COG id: COG3436
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004291 [H]
Pfam domain/function: PF03050 Transposase_25 [H]
EC number: NA
Molecular weight: Translated: 37486; Mature: 37355
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFGLLHRWLTDMGMTISKNTLRNWLTKDKTYLDELVCVLKSIALEKDSIVNCDETWCKV CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH RKYDHYKKCYIGVLVNKARKTAIFFYENGSCGRDVLTDFLGDAELKSIMSDGYNAYVFIG HHHHHHHHHHHHHHHHHCHHEEEEEEECCCCCHHHHHHHHCHHHHHHHHHCCCEEEEEEC NELKLGRFKDTVHQVCMSHAKNKFVKASNQGGEPTAERFSEILKEFFMRDREYDDAGLTP CCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCH KERFQERQSLETKELLIELRSLLDSEQSKDSEFRSRYYKEALNYLNRFRKEIFAYLDDGE HHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LPIDNNLAERTIRKLTTQRNNSLHYGSDAGAEMAATYHSVIGTVKLLGSSIWNFIGTFFK CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIFNGCRDYVNMVPDKITLATSQC HHHHHHHHHHHHCCCCEEECCCCC >Mature Secondary Structure TFGLLHRWLTDMGMTISKNTLRNWLTKDKTYLDELVCVLKSIALEKDSIVNCDETWCKV CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH RKYDHYKKCYIGVLVNKARKTAIFFYENGSCGRDVLTDFLGDAELKSIMSDGYNAYVFIG HHHHHHHHHHHHHHHHHCHHEEEEEEECCCCCHHHHHHHHCHHHHHHHHHCCCEEEEEEC NELKLGRFKDTVHQVCMSHAKNKFVKASNQGGEPTAERFSEILKEFFMRDREYDDAGLTP CCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCH KERFQERQSLETKELLIELRSLLDSEQSKDSEFRSRYYKEALNYLNRFRKEIFAYLDDGE HHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LPIDNNLAERTIRKLTTQRNNSLHYGSDAGAEMAATYHSVIGTVKLLGSSIWNFIGTFFK CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIFNGCRDYVNMVPDKITLATSQC HHHHHHHHHHHHCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]