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The map label for this gene is rfaB [C]

Identifier: 150006459

GI number: 150006459

Start: 4896721

End: 4897920

Strand: Direct

Name: rfaB [C]

Synonym: BVU_3978

Alternate gene names: 150006459

Gene position: 4896721-4897920 (Clockwise)

Preceding gene: 150006458

Following gene: 150006460

Centisome position: 94.84

GC content: 41.08

Gene sequence:

>1200_bases
ATGGAAAGAACAGATGATGAAAGTAATAAACAACCTGTAATACTCCCGCCTATGATCCGAATCGCCTATTGTACCCCCTC
TCTCCATATCCCCGGAGGAGTGGAAAGGGTACTGACCACCAAAGCCAATTATCTGGCAGAGAATGGTAATTATGACATAT
ATATTTTGCTGACTGACGGAAAAGGCAAGCCTCCCTGCTATACTTTATCGCCTAAAGTAAAAATCATCCAACTGGATATA
GATTTTGAAGAATTATGGGAACTCCCTCTTTGGAAAAAAGTGCCGGTTTATCTGAAAAAACAAAGAATATACCGACGCAA
GCTCTCTGCCGCCTTGTCTCACCTCAAACCGGACATCACAGTTTCTTTGTTACGACGGGAAATAAACTTTATCACTTCCC
TCAAAGATGGAAGCAAAAAGATAGGGGAGCTACATGTAAACCGGAAAAACTATCGTAACTTTGAAAAGAACGAAAGCAAC
TTCATCAAGGAACTTTTTGCCAAATTATGGATGAAAAGTCTGGTGAGGCATTTAAAAAAGCTGGACAAGTTCGTTGTACT
GAGTGAGGAAGACAGAGCCAACTGGCCCGAACTGCAAAATGTAAAAGTTATCAGCAACCCTCTACCCTTTCAATCCGGAA
CATTCAGCGACTTGAACAATAAACGGATAACCGCAGCCGGAAGATATACTTATCAAAAAGGATTCGATTTGTTACTGGAA
GCATGGAGCAAAATCTGTAACCGGCATCCGGACTGGGAATTACATATATATGGCAAAGGAAACAAGACTACATATCAAGT
ACTGGCCGGAAAATGGAAATTAAAGAACCTTTTTCTTGAAAATGCAACCCCGGATATGCTCTGTAAATACCATGAAAGTT
CTATCTTTGTATCAAGTTCCAGATTTGAGGGATTCGGAATGGTCATAGCGGAAGCAATGGCGTGCGGAGTACCTGCCGTG
TCATTCGCCTGTCCGTGCGGACCTAAAGACATCATCCGGGACGGGGAAGACGGACTATTGGTCGAAAATGGAAAAACAGA
AGAACTGGCCGAAAAAATAAATTATCTGATTGAGAACGAACAAATAAGAAAAGAAATGGGGAAAAAAGCCCGCATCAATG
TACAACGTTTTGCTGAAGATGTAATAATGCAACAATGGATTCAGCTATTCAACAACTTATTAAACGGAACAAAACAATGA

Upstream 100 bases:

>100_bases
CGGCCGACGAAAGTCCCATAGATATCCACCGGCTTATCCGGTTCTATATGGAACTGGATCTGTCTCCTCGTAAAATAAGG
GATTCCATTAAAAACCTGTC

Downstream 100 bases:

>100_bases
AAACAGATTCCCCCTACGACAGAGGAGACATCCATATAAATAAAAACGACAAAGTGCTGGAGATAGGTCCGGGCCATAAT
CCGACATATCGCTCCAACGT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MERTDDESNKQPVILPPMIRIAYCTPSLHIPGGVERVLTTKANYLAENGNYDIYILLTDGKGKPPCYTLSPKVKIIQLDI
DFEELWELPLWKKVPVYLKKQRIYRRKLSAALSHLKPDITVSLLRREINFITSLKDGSKKIGELHVNRKNYRNFEKNESN
FIKELFAKLWMKSLVRHLKKLDKFVVLSEEDRANWPELQNVKVISNPLPFQSGTFSDLNNKRITAAGRYTYQKGFDLLLE
AWSKICNRHPDWELHIYGKGNKTTYQVLAGKWKLKNLFLENATPDMLCKYHESSIFVSSSRFEGFGMVIAEAMACGVPAV
SFACPCGPKDIIRDGEDGLLVENGKTEELAEKINYLIENEQIRKEMGKKARINVQRFAEDVIMQQWIQLFNNLLNGTKQ

Sequences:

>Translated_399_residues
MERTDDESNKQPVILPPMIRIAYCTPSLHIPGGVERVLTTKANYLAENGNYDIYILLTDGKGKPPCYTLSPKVKIIQLDI
DFEELWELPLWKKVPVYLKKQRIYRRKLSAALSHLKPDITVSLLRREINFITSLKDGSKKIGELHVNRKNYRNFEKNESN
FIKELFAKLWMKSLVRHLKKLDKFVVLSEEDRANWPELQNVKVISNPLPFQSGTFSDLNNKRITAAGRYTYQKGFDLLLE
AWSKICNRHPDWELHIYGKGNKTTYQVLAGKWKLKNLFLENATPDMLCKYHESSIFVSSSRFEGFGMVIAEAMACGVPAV
SFACPCGPKDIIRDGEDGLLVENGKTEELAEKINYLIENEQIRKEMGKKARINVQRFAEDVIMQQWIQLFNNLLNGTKQ
>Mature_399_residues
MERTDDESNKQPVILPPMIRIAYCTPSLHIPGGVERVLTTKANYLAENGNYDIYILLTDGKGKPPCYTLSPKVKIIQLDI
DFEELWELPLWKKVPVYLKKQRIYRRKLSAALSHLKPDITVSLLRREINFITSLKDGSKKIGELHVNRKNYRNFEKNESN
FIKELFAKLWMKSLVRHLKKLDKFVVLSEEDRANWPELQNVKVISNPLPFQSGTFSDLNNKRITAAGRYTYQKGFDLLLE
AWSKICNRHPDWELHIYGKGNKTTYQVLAGKWKLKNLFLENATPDMLCKYHESSIFVSSSRFEGFGMVIAEAMACGVPAV
SFACPCGPKDIIRDGEDGLLVENGKTEELAEKINYLIENEQIRKEMGKKARINVQRFAEDVIMQQWIQLFNNLLNGTKQ

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 46018; Mature: 46018

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERTDDESNKQPVILPPMIRIAYCTPSLHIPGGVERVLTTKANYLAENGNYDIYILLTDG
CCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECC
KGKPPCYTLSPKVKIIQLDIDFEELWELPLWKKVPVYLKKQRIYRRKLSAALSHLKPDIT
CCCCCEEEECCCEEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
VSLLRREINFITSLKDGSKKIGELHVNRKNYRNFEKNESNFIKELFAKLWMKSLVRHLKK
HHHHHHHHHHHHHCCCCCHHHHHEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LDKFVVLSEEDRANWPELQNVKVISNPLPFQSGTFSDLNNKRITAAGRYTYQKGFDLLLE
HHHEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH
AWSKICNRHPDWELHIYGKGNKTTYQVLAGKWKLKNLFLENATPDMLCKYHESSIFVSSS
HHHHHHCCCCCEEEEEEECCCCEEEEEEECCHHHHHHHHCCCCHHHHHHHCCCEEEEECC
RFEGFGMVIAEAMACGVPAVSFACPCGPKDIIRDGEDGLLVENGKTEELAEKINYLIENE
CCCCHHHHHHHHHHCCCCHHHEECCCCCHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCH
QIRKEMGKKARINVQRFAEDVIMQQWIQLFNNLLNGTKQ
HHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MERTDDESNKQPVILPPMIRIAYCTPSLHIPGGVERVLTTKANYLAENGNYDIYILLTDG
CCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECC
KGKPPCYTLSPKVKIIQLDIDFEELWELPLWKKVPVYLKKQRIYRRKLSAALSHLKPDIT
CCCCCEEEECCCEEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
VSLLRREINFITSLKDGSKKIGELHVNRKNYRNFEKNESNFIKELFAKLWMKSLVRHLKK
HHHHHHHHHHHHHCCCCCHHHHHEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LDKFVVLSEEDRANWPELQNVKVISNPLPFQSGTFSDLNNKRITAAGRYTYQKGFDLLLE
HHHEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH
AWSKICNRHPDWELHIYGKGNKTTYQVLAGKWKLKNLFLENATPDMLCKYHESSIFVSSS
HHHHHHCCCCCEEEEEEECCCCEEEEEEECCHHHHHHHHCCCCHHHHHHHCCCEEEEECC
RFEGFGMVIAEAMACGVPAVSFACPCGPKDIIRDGEDGLLVENGKTEELAEKINYLIENE
CCCCHHHHHHHHHHCCCCHHHEECCCCCHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCH
QIRKEMGKKARINVQRFAEDVIMQQWIQLFNNLLNGTKQ
HHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]