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The map label for this gene is xylB [H]

Identifier: 150006435

GI number: 150006435

Start: 4871025

End: 4872518

Strand: Reverse

Name: xylB [H]

Synonym: BVU_3954

Alternate gene names: 150006435

Gene position: 4872518-4871025 (Counterclockwise)

Preceding gene: 150006436

Following gene: 150006434

Centisome position: 94.37

GC content: 49.26

Gene sequence:

>1494_bases
ATGTACCTATTAGGTTATGATATTGGCAGTTCGTCGGTAAAGGCGAGTTTGGTAAATGCAGAGACCGGAAAGTGTGTTTC
TTCTGCATTCTTCCCTAAAACAGAGGCTGCTATTATGGCTGCCCGCCCCGGATGGGCTGAGCAGGATCCGCAAAATTGGT
GGGAAAATCTGAAATTGTCAACTCAGGCTGTCATGGCCGGGAGTGGGATCGGTCCGGATGGAATTGCCGCTATCGGTATC
TCTTATCAGATGCACGGACTGGTTTGTGTGGATAAAGGGCAAAATGTATTACGTCCGGCTATTATATGGTGTGACTCACG
GGCGGTTCCATACGGGCAGAAAGCGTTTGAGGCATTGGGGGAAACGCAATGTCTTTCTCATCTGCTGAACTCTCCGGGGA
ATTTTACCGCTTCCAAACTGGCATGGATTAAAGAGAATGAGCCTGCTGTGTACGAACGTATTTATAAAATAATGCTGCCA
GGCGATTATATCGCTATGAAACTGACGGGGGATATTTGTACCACGGTGTCCGGTTTGTCCGAAGGGATGTTCTGGGATTT
TCAGGCAAATGATGTCGCGGGCTTCCTGATGGATTATTATGGATTCGACCGTTCGCTGATAGCTGATATCAAACCGACTT
TTGGCGAGCAGGGACGTGTAAATGCATGGGCTGCCAAAGAATTGGGCCTGAGAGAGGGAATTCCTGTAACCTATCGCGCC
GGAGACCAGCCTAATAATGCTTTGTCGCTCAATGTGTTCAATCCGGGAGAGATTGCTTCTACGGCAGGAACATCGGGAGT
GGTATATGGCGTGAACGGTGAGGTGAATTATGATCCGAAATCCCGGGTGAATACTTTTGCCCATGTAAATCATACTGCCG
AGCAGACCCGTCTGGGAGTGTTGTTGTGCATCAATGGTACCGGTATATTGAATTCGTGGGTGAAACGTAATGTGGCTCCC
GAAGGTATTTCTTACAGTGATATGAACAGGCTGGCGGCACAGGCTCCTGTCGGCAGTGCCGGAGTAAGTATTCTTCCTTT
TGGCAACGGGGCGGAGCGTATGCTGGAAAATAAAGAGACAGGATGCTCTATATGTGGAGTTAATTTTAACCTGCATGGAA
AGCAGCATATTGTTCGTGCCGCACAGGAAGGGATCGTGTTCTCGTTTAAATACGGCATTGATATCATGGAGCAGATGGGT
ATCCCTGTACAGAAGATTCATGCCGGACATGCCAATATGTTTCTCAGTCCTATCTTCCGCGAAACGTTGGCGGGAGTGAC
AGGGGCTGTAATCGAACTGTATGACACGGATGGATCGGTGGGCGCCGCCAAGGGGGCCGGCATAGGCGCGGGTGTTTATA
AAGATAACAACGAGGCATTTGCCACATTGGAAAAACTGGAGGTGATAGAGCCTGATGTGGCACAGCGCACTGCTTACGAT
GATGCGTATGCCCGCTGGAAATCCAATCTGGAGAGAGCGATGGCTGCCTTTTAA

Upstream 100 bases:

>100_bases
TATATGTTTTGGGATTCTTCACCGGCCTTTCCTTGGAAGGATAATGCTGATAAGCATCGGGACAGAGACTATTATTTTAA
AATTCTTAATTTTCAATTAA

Downstream 100 bases:

>100_bases
GGACCTTCGGATAAAGAAATGGCTATCCGCCTGCGTGTTGAAAAAAAATAGTAGATAAATTAGAACAAGTTATTAAAATA
AGTAAAGAATTATGGCTACA

Product: xylulose kinase

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MYLLGYDIGSSSVKASLVNAETGKCVSSAFFPKTEAAIMAARPGWAEQDPQNWWENLKLSTQAVMAGSGIGPDGIAAIGI
SYQMHGLVCVDKGQNVLRPAIIWCDSRAVPYGQKAFEALGETQCLSHLLNSPGNFTASKLAWIKENEPAVYERIYKIMLP
GDYIAMKLTGDICTTVSGLSEGMFWDFQANDVAGFLMDYYGFDRSLIADIKPTFGEQGRVNAWAAKELGLREGIPVTYRA
GDQPNNALSLNVFNPGEIASTAGTSGVVYGVNGEVNYDPKSRVNTFAHVNHTAEQTRLGVLLCINGTGILNSWVKRNVAP
EGISYSDMNRLAAQAPVGSAGVSILPFGNGAERMLENKETGCSICGVNFNLHGKQHIVRAAQEGIVFSFKYGIDIMEQMG
IPVQKIHAGHANMFLSPIFRETLAGVTGAVIELYDTDGSVGAAKGAGIGAGVYKDNNEAFATLEKLEVIEPDVAQRTAYD
DAYARWKSNLERAMAAF

Sequences:

>Translated_497_residues
MYLLGYDIGSSSVKASLVNAETGKCVSSAFFPKTEAAIMAARPGWAEQDPQNWWENLKLSTQAVMAGSGIGPDGIAAIGI
SYQMHGLVCVDKGQNVLRPAIIWCDSRAVPYGQKAFEALGETQCLSHLLNSPGNFTASKLAWIKENEPAVYERIYKIMLP
GDYIAMKLTGDICTTVSGLSEGMFWDFQANDVAGFLMDYYGFDRSLIADIKPTFGEQGRVNAWAAKELGLREGIPVTYRA
GDQPNNALSLNVFNPGEIASTAGTSGVVYGVNGEVNYDPKSRVNTFAHVNHTAEQTRLGVLLCINGTGILNSWVKRNVAP
EGISYSDMNRLAAQAPVGSAGVSILPFGNGAERMLENKETGCSICGVNFNLHGKQHIVRAAQEGIVFSFKYGIDIMEQMG
IPVQKIHAGHANMFLSPIFRETLAGVTGAVIELYDTDGSVGAAKGAGIGAGVYKDNNEAFATLEKLEVIEPDVAQRTAYD
DAYARWKSNLERAMAAF
>Mature_497_residues
MYLLGYDIGSSSVKASLVNAETGKCVSSAFFPKTEAAIMAARPGWAEQDPQNWWENLKLSTQAVMAGSGIGPDGIAAIGI
SYQMHGLVCVDKGQNVLRPAIIWCDSRAVPYGQKAFEALGETQCLSHLLNSPGNFTASKLAWIKENEPAVYERIYKIMLP
GDYIAMKLTGDICTTVSGLSEGMFWDFQANDVAGFLMDYYGFDRSLIADIKPTFGEQGRVNAWAAKELGLREGIPVTYRA
GDQPNNALSLNVFNPGEIASTAGTSGVVYGVNGEVNYDPKSRVNTFAHVNHTAEQTRLGVLLCINGTGILNSWVKRNVAP
EGISYSDMNRLAAQAPVGSAGVSILPFGNGAERMLENKETGCSICGVNFNLHGKQHIVRAAQEGIVFSFKYGIDIMEQMG
IPVQKIHAGHANMFLSPIFRETLAGVTGAVIELYDTDGSVGAAKGAGIGAGVYKDNNEAFATLEKLEVIEPDVAQRTAYD
DAYARWKSNLERAMAAF

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI42794763, Length=433, Percent_Identity=22.6327944572748, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI189409120, Length=433, Percent_Identity=22.8637413394919, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI4504007, Length=433, Percent_Identity=22.8637413394919, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI1789987, Length=493, Percent_Identity=28.8032454361055, Blast_Score=157, Evalue=2e-39,
Organism=Escherichia coli, GI1790005, Length=516, Percent_Identity=27.906976744186, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI1787789, Length=520, Percent_Identity=22.6923076923077, Blast_Score=85, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17535599, Length=452, Percent_Identity=22.3451327433628, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI17864214, Length=515, Percent_Identity=22.5242718446602, Blast_Score=73, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 53487; Mature: 53487

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLLGYDIGSSSVKASLVNAETGKCVSSAFFPKTEAAIMAARPGWAEQDPQNWWENLKLS
CEEEEEECCCCCCEEEEEECCCCCHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHCCCCC
TQAVMAGSGIGPDGIAAIGISYQMHGLVCVDKGQNVLRPAIIWCDSRAVPYGQKAFEALG
HHEEEECCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHC
ETQCLSHLLNSPGNFTASKLAWIKENEPAVYERIYKIMLPGDYIAMKLTGDICTTVSGLS
HHHHHHHHHCCCCCCCHHHEEEEECCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCC
EGMFWDFQANDVAGFLMDYYGFDRSLIADIKPTFGEQGRVNAWAAKELGLREGIPVTYRA
CCCEEEECCCHHHHHHHHHHCCCCHHEECCCCCCCCCCCCEEEHHHHCCHHCCCCEEEEC
GDQPNNALSLNVFNPGEIASTAGTSGVVYGVNGEVNYDPKSRVNTFAHVNHTAEQTRLGV
CCCCCCEEEEEECCCCCHHHCCCCCCEEEECCCEECCCCHHHHHHHHHCCCCHHHCCEEE
LLCINGTGILNSWVKRNVAPEGISYSDMNRLAAQAPVGSAGVSILPFGNGAERMLENKET
EEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCC
GCSICGVNFNLHGKQHIVRAAQEGIVFSFKYGIDIMEQMGIPVQKIHAGHANMFLSPIFR
CCEEEEEEEECCCHHHHHHHHHCCEEEEEECCCHHHHHCCCCHHHHCCCCHHHHHHHHHH
ETLAGVTGAVIELYDTDGSVGAAKGAGIGAGVYKDNNEAFATLEKLEVIEPDVAQRTAYD
HHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHH
DAYARWKSNLERAMAAF
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYLLGYDIGSSSVKASLVNAETGKCVSSAFFPKTEAAIMAARPGWAEQDPQNWWENLKLS
CEEEEEECCCCCCEEEEEECCCCCHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHCCCCC
TQAVMAGSGIGPDGIAAIGISYQMHGLVCVDKGQNVLRPAIIWCDSRAVPYGQKAFEALG
HHEEEECCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHC
ETQCLSHLLNSPGNFTASKLAWIKENEPAVYERIYKIMLPGDYIAMKLTGDICTTVSGLS
HHHHHHHHHCCCCCCCHHHEEEEECCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCC
EGMFWDFQANDVAGFLMDYYGFDRSLIADIKPTFGEQGRVNAWAAKELGLREGIPVTYRA
CCCEEEECCCHHHHHHHHHHCCCCHHEECCCCCCCCCCCCEEEHHHHCCHHCCCCEEEEC
GDQPNNALSLNVFNPGEIASTAGTSGVVYGVNGEVNYDPKSRVNTFAHVNHTAEQTRLGV
CCCCCCEEEEEECCCCCHHHCCCCCCEEEECCCEECCCCHHHHHHHHHCCCCHHHCCEEE
LLCINGTGILNSWVKRNVAPEGISYSDMNRLAAQAPVGSAGVSILPFGNGAERMLENKET
EEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCC
GCSICGVNFNLHGKQHIVRAAQEGIVFSFKYGIDIMEQMGIPVQKIHAGHANMFLSPIFR
CCEEEEEEEECCCHHHHHHHHHCCEEEEEECCCHHHHHCCCCHHHHCCCCHHHHHHHHHH
ETLAGVTGAVIELYDTDGSVGAAKGAGIGAGVYKDNNEAFATLEKLEVIEPDVAQRTAYD
HHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHH
DAYARWKSNLERAMAAF
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 2994009 [H]