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The map label for this gene is rfaB [C]

Identifier: 150006408

GI number: 150006408

Start: 4837396

End: 4838349

Strand: Reverse

Name: rfaB [C]

Synonym: BVU_3927

Alternate gene names: 150006408

Gene position: 4838349-4837396 (Counterclockwise)

Preceding gene: 150006409

Following gene: 150006407

Centisome position: 93.71

GC content: 29.14

Gene sequence:

>954_bases
ATGAATTTTATAAAGGAAAAACATATTGAAATTGTGCTAAACCAGACTTGCTTAAATCCTAAATTATCAGTGTTTTTACC
TGTTATAAAAAAAACAGGAGTTCAACTTATTTCAGTATTTCATAGTCAGCCGTATGGTATGTACGGGATAAAAGCATTTC
CTAAAATTTGTAATGTTTTTGGTGTTGACAAGGTAGGAAATTTAGTGGATGTACTTATACATTTTGCATTTAAGTTGAAA
TATGGAAGATATTTAAAAAGAATGCTTCAATATAGTGATAAACTAGTGATGCTTTCAGATAAATTTATAAATGAATTTTT
ATATTTTTCGGGGAAAAAATATGCTGAAAAGATGTTGTCTATTTCTAATCCTGTAACTATTAATGGGGGAGGGAGTGAAA
AAAAAGAAAAAATAGTTCTTTTTGTGGGAAGGATCAGCCAAGAAAAAGGTGTAGATAAAATTTTAGAAGTATGGCGTGGA
ATCTGTCATGAAGAAAAGTATAAAGAGTGGCGGTTGGTGATTGTAGGTGATGGTGAAAAAAGAAAACAAATGGAAAAGTA
TGCAATGGATATGGAACTTATTAACTATTCATTTGAAGGATTTCAAAAGCCTGATGGATATTATGATAAAGCAAAGATTT
TTTGTATGGCTTCAGCATTTGAAGGGTTTGGATTAGTTTTGGTGGAAGCAATGTCGTATGGTGTAGTGCCAATGGCATTT
AATAGTTTTTCTAATTGTTCGGATATTATAGATGATGATAAGAATGGGATTTTAGTTACTCCTTTTTCAATCAATGAATA
TAGAAAAAAAATAATAGAGCTTATTGAAAATGATGAAAAATGGATGAAAATGTCCACTTGTTCTATAAATAAAAGTAAAG
AATATTCTATAGAATGCATAGGTGCTAAATGGTTGGATTTATTTTATTCTCTTTTAAATAATAAAGTTACTTGA

Upstream 100 bases:

>100_bases
TATTATTTCTATTAATCGAACTTCAGATTATTTAGATGATATTCAAATCTATTTGCCAGATCAAAAACGAAATGATAGTG
ATGCAAATAAACAATTTCTT

Downstream 100 bases:

>100_bases
GATAAACCATATACAGACTTGGCAACTTCATTAGTCTGAAATAGGTAAAGTTGCTATATATATAGTGAAATCGATAGGGT
ATGACGAGCAAATAGAAAAA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MNFIKEKHIEIVLNQTCLNPKLSVFLPVIKKTGVQLISVFHSQPYGMYGIKAFPKICNVFGVDKVGNLVDVLIHFAFKLK
YGRYLKRMLQYSDKLVMLSDKFINEFLYFSGKKYAEKMLSISNPVTINGGGSEKKEKIVLFVGRISQEKGVDKILEVWRG
ICHEEKYKEWRLVIVGDGEKRKQMEKYAMDMELINYSFEGFQKPDGYYDKAKIFCMASAFEGFGLVLVEAMSYGVVPMAF
NSFSNCSDIIDDDKNGILVTPFSINEYRKKIIELIENDEKWMKMSTCSINKSKEYSIECIGAKWLDLFYSLLNNKVT

Sequences:

>Translated_317_residues
MNFIKEKHIEIVLNQTCLNPKLSVFLPVIKKTGVQLISVFHSQPYGMYGIKAFPKICNVFGVDKVGNLVDVLIHFAFKLK
YGRYLKRMLQYSDKLVMLSDKFINEFLYFSGKKYAEKMLSISNPVTINGGGSEKKEKIVLFVGRISQEKGVDKILEVWRG
ICHEEKYKEWRLVIVGDGEKRKQMEKYAMDMELINYSFEGFQKPDGYYDKAKIFCMASAFEGFGLVLVEAMSYGVVPMAF
NSFSNCSDIIDDDKNGILVTPFSINEYRKKIIELIENDEKWMKMSTCSINKSKEYSIECIGAKWLDLFYSLLNNKVT
>Mature_317_residues
MNFIKEKHIEIVLNQTCLNPKLSVFLPVIKKTGVQLISVFHSQPYGMYGIKAFPKICNVFGVDKVGNLVDVLIHFAFKLK
YGRYLKRMLQYSDKLVMLSDKFINEFLYFSGKKYAEKMLSISNPVTINGGGSEKKEKIVLFVGRISQEKGVDKILEVWRG
ICHEEKYKEWRLVIVGDGEKRKQMEKYAMDMELINYSFEGFQKPDGYYDKAKIFCMASAFEGFGLVLVEAMSYGVVPMAF
NSFSNCSDIIDDDKNGILVTPFSINEYRKKIIELIENDEKWMKMSTCSINKSKEYSIECIGAKWLDLFYSLLNNKVT

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 36545; Mature: 36545

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFIKEKHIEIVLNQTCLNPKLSVFLPVIKKTGVQLISVFHSQPYGMYGIKAFPKICNVF
CCCCHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
GVDKVGNLVDVLIHFAFKLKYGRYLKRMLQYSDKLVMLSDKFINEFLYFSGKKYAEKMLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCHHHHHHHHH
ISNPVTINGGGSEKKEKIVLFVGRISQEKGVDKILEVWRGICHEEKYKEWRLVIVGDGEK
CCCCEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCHH
RKQMEKYAMDMELINYSFEGFQKPDGYYDKAKIFCMASAFEGFGLVLVEAMSYGVVPMAF
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHHHCCCHHHHH
NSFSNCSDIIDDDKNGILVTPFSINEYRKKIIELIENDEKWMKMSTCSINKSKEYSIECI
CCCCCCHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCHHHEEEHHCCCCCCCCCEEEEE
GAKWLDLFYSLLNNKVT
CHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNFIKEKHIEIVLNQTCLNPKLSVFLPVIKKTGVQLISVFHSQPYGMYGIKAFPKICNVF
CCCCHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
GVDKVGNLVDVLIHFAFKLKYGRYLKRMLQYSDKLVMLSDKFINEFLYFSGKKYAEKMLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCHHHHHHHHH
ISNPVTINGGGSEKKEKIVLFVGRISQEKGVDKILEVWRGICHEEKYKEWRLVIVGDGEK
CCCCEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCHH
RKQMEKYAMDMELINYSFEGFQKPDGYYDKAKIFCMASAFEGFGLVLVEAMSYGVVPMAF
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHHHCCCHHHHH
NSFSNCSDIIDDDKNGILVTPFSINEYRKKIIELIENDEKWMKMSTCSINKSKEYSIECI
CCCCCCHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCHHHEEEHHCCCCCCCCCEEEEE
GAKWLDLFYSLLNNKVT
CHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]