| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006380
Identifier: 150006380
GI number: 150006380
Start: 4805953
End: 4808616
Strand: Reverse
Name: 150006380
Synonym: BVU_3899
Alternate gene names: NA
Gene position: 4808616-4805953 (Counterclockwise)
Preceding gene: 150006381
Following gene: 150006379
Centisome position: 93.13
GC content: 50.98
Gene sequence:
>2664_bases ATGAAATTATTGGCTCTGTGTGCGGCGGGGATAGGCTTGATGCTGTGTGCCTCGTGTACAAACAACAAACATTTGATCAG TGATGAGGCTGAACGTGCCGCTGTTCAGCAGGATTTTGAGGCACGGCGTGATACGCTGGCCCAAGGTGACCTCTTCCAGG TATTCGAACAACCCATGAGCGATGAGCAGAAGGAGGCGATGACTTTCCTTTACGCCTATATGCCTTTGGCGGATATAGCG GATCATCCCGGTGAATTCTATCTGGAAAACGTGGATTACGCTTTCAAGGCGCGTGAGGAGATGCCGTGGGGAAAAGTGGT TCCCGAACGCGAGTTCCGCCACTTTGTACTGCCCATCCGCGTAAACAACGAGAATCTGGACGACAGCCGTAAGGTATTCT ACGAGGAACTGAAGGACAGAGTGAAAAACCTTTCTTTATATGATGCCGTGCTGGAAGTGAACCACTGGTGTCATGAGAAG GTGATTTATACTCCCTCTGATGCCCGTACCAGTAGTCCGCTGGCTTCCGTAAAGACAGCCTACGGACGTTGCGGCGAGGA ATCTACGTTCACGGTAGCCGCCTTGCGTTCGGTAGGCATCCCTGCCCGCCAGGTATATACGCCGCGTTGGGCACATACCG ATGATAATCATGCCTGGGTGGAAGCCTGGGTGGATGGCAAATGGTACTTCCTGGGTGCTTGCGAACCCGAACCGGTACTG AATCTGGGTTGGTTCAACGCTCCCGCTTCACGGGGTATGCTGATGCACACCAAGGTGTTCGGACGTTATAACGGACCGGA AGAAGTGATGTACCGCACTCCCCGGTATACGGAAATCAATGTGATTGACAACTATGCCCCTACGGCAAAAGCCGATGTGG CCATCGTGGATGCGGATGGCAAACCGGTGGCTGATGCCAAAGTGGAATTCAAGGTGTATAACTATGCCGAATTTTATACC GTAGCTTCCAAACAGACGGATGCGGACGGCAAGACGTTCCTGACAGCCGGAAAAGGGGATATGCTGGTATGGGCTTCCAA AGATGGAAAATTCGGTTACTCCAAACTGTCTTTCGGAAAAGACAATGCCTTGACCGTGAAACTGGACAAGACGGCCGGCG AGGCTTATACACTGGATATGGATATCATTCCTCCGGTGGAAGGCGCCAATATGCCCGAAGTGACTCCCGAACAACGTGCG GAGAACAATCGCCGCATGGCCTTGGAGGACTCTATCCGCAATGCCTACGTGGCTACGTTCATGACGGATGAATCGGCCCG TCATTTCGCTAAAGAGTATCAGTTGGACGAGGATGTTGTTGCCAAATTGCTGGTGGCATCACGTGGTAACCACGAAACCA TCCGTGACTTTATGGCCCGTCTCCGTTCGGACAAGTCAAAGAAGGGCGGCATTGACCTGCTTCAGCAGATTTCCGCCAAA GACCTTCGCGATGTAAGTTCCGAAGTGTTGATAGACCACATGATGAATTCACATCTGTGCGCCAATGCCGATTATTTCCG CAGATTTGTGCGTAATCCGCGTGTGAGCAACGAAATGATTACTCCGTACAAAGGATTCTTTGAGAAAGCAGTGCCCGAAC AGGAGCGTGAGGCTTACCTTGCCGATCCGATGAAGCTGGTTGCATGGGTTGCCGAAAATATCCGTGTGGACAAGGATTGC AATCTGGGCGGTTCTCCGATTACTCCGGAAGGGGTGTGGAAGGCCCGTACAGCCGATGCGCACAGCCGTGATATCTTCTT TGTTTCCATGGCACGCAGCATGGGTATTCCTGCACGTATAGACGAAGTGACCGGAAAAGTGCAGTTGATGGGTGATGAAG GTGCTGTTGATGTGAACTTTGAGGCGATGGAACAGGCCAGTGCGCCTACCGGCAAGTTTATTGCCAGATATACGCCGATC AAGTCTTTGGCCGACCCGAAGTATTATTCTCATTTCTCTATTTCCAGACTGACTCCTGCCGGAACCTTGAAATTGCTGAA TTATGATGAAGGCGATATTGATATGGGTGGCGGTGCTACTTGGGCTAATCTGTTGAAGAACGGAACGGCACTGGATGCCG GCAATTATGTGATGGTGACCGGTACTCGTCTGGCCAACGGCGGCGTATTGTCCCAGCTGACTTTCTTTACCATCAAGCCG GGGGAAACGACTACGGTGGACTTGGTGATGCGTGAAAGTAAGGATGATATTCAGGTGATCGGTAACTTCAACTCGGAATC TACTTATAAACCGATAGATAGCGATGAACTGAAGTCTATTCTTGCCACTACAGGACGTGGTTACTACATTGTAGCCGTAC TGGGTGCCGGACAAGAACCTACGAACCATGCCTTGCGTGATATTGCGGCATTGGGTAAGGAGTTTGATGAATGGGGCAGA GGAATCGTGCTGTTGTTCCCCAACGAGGAGCAGTACAAGAAGTTCCGCCCGCAGGAATTCCCCGGATTACCGGCTACCAT TACTTACGGTATTGATGTGGACGGTTCCATCCAGAAGCAGATTGCAGAAGGCATGAAGTTGTCTAACAAGACTATCCTGC CTATGTTTATCATTGGGGATACCTTTAACCGGGTGGTATTCGTGTCACAAGGATATACCATCGGACTGGGTGAGCAGCTG ATGAAGGTGATACATAAGCTGTAG
Upstream 100 bases:
>100_bases GCCGGCGGATACTAAATAATAGCTTGAACTTCGTCAAAAATAAGAAAAAAGTCTTATCTTCGTAGCCAATAACAAATTGC TAACCTAAATAAACAACAAG
Downstream 100 bases:
>100_bases GATTCAGTATAAACAAAAAGTAACGCGGATATTCAAGTTTGCAAACTGAATATCCGCGTTAAATAGGGACATTCATTAAA TATTACAAAATCAGCCAACT
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase Domain Protein; Transglutaminase Domain-Containing Protein; Transglutaminase-Like Protein; Transglutaminase-Family Protein; Polyhydroxyalkanoate Depolymerase
Number of amino acids: Translated: 887; Mature: 887
Protein sequence:
>887_residues MKLLALCAAGIGLMLCASCTNNKHLISDEAERAAVQQDFEARRDTLAQGDLFQVFEQPMSDEQKEAMTFLYAYMPLADIA DHPGEFYLENVDYAFKAREEMPWGKVVPEREFRHFVLPIRVNNENLDDSRKVFYEELKDRVKNLSLYDAVLEVNHWCHEK VIYTPSDARTSSPLASVKTAYGRCGEESTFTVAALRSVGIPARQVYTPRWAHTDDNHAWVEAWVDGKWYFLGACEPEPVL NLGWFNAPASRGMLMHTKVFGRYNGPEEVMYRTPRYTEINVIDNYAPTAKADVAIVDADGKPVADAKVEFKVYNYAEFYT VASKQTDADGKTFLTAGKGDMLVWASKDGKFGYSKLSFGKDNALTVKLDKTAGEAYTLDMDIIPPVEGANMPEVTPEQRA ENNRRMALEDSIRNAYVATFMTDESARHFAKEYQLDEDVVAKLLVASRGNHETIRDFMARLRSDKSKKGGIDLLQQISAK DLRDVSSEVLIDHMMNSHLCANADYFRRFVRNPRVSNEMITPYKGFFEKAVPEQEREAYLADPMKLVAWVAENIRVDKDC NLGGSPITPEGVWKARTADAHSRDIFFVSMARSMGIPARIDEVTGKVQLMGDEGAVDVNFEAMEQASAPTGKFIARYTPI KSLADPKYYSHFSISRLTPAGTLKLLNYDEGDIDMGGGATWANLLKNGTALDAGNYVMVTGTRLANGGVLSQLTFFTIKP GETTTVDLVMRESKDDIQVIGNFNSESTYKPIDSDELKSILATTGRGYYIVAVLGAGQEPTNHALRDIAALGKEFDEWGR GIVLLFPNEEQYKKFRPQEFPGLPATITYGIDVDGSIQKQIAEGMKLSNKTILPMFIIGDTFNRVVFVSQGYTIGLGEQL MKVIHKL
Sequences:
>Translated_887_residues MKLLALCAAGIGLMLCASCTNNKHLISDEAERAAVQQDFEARRDTLAQGDLFQVFEQPMSDEQKEAMTFLYAYMPLADIA DHPGEFYLENVDYAFKAREEMPWGKVVPEREFRHFVLPIRVNNENLDDSRKVFYEELKDRVKNLSLYDAVLEVNHWCHEK VIYTPSDARTSSPLASVKTAYGRCGEESTFTVAALRSVGIPARQVYTPRWAHTDDNHAWVEAWVDGKWYFLGACEPEPVL NLGWFNAPASRGMLMHTKVFGRYNGPEEVMYRTPRYTEINVIDNYAPTAKADVAIVDADGKPVADAKVEFKVYNYAEFYT VASKQTDADGKTFLTAGKGDMLVWASKDGKFGYSKLSFGKDNALTVKLDKTAGEAYTLDMDIIPPVEGANMPEVTPEQRA ENNRRMALEDSIRNAYVATFMTDESARHFAKEYQLDEDVVAKLLVASRGNHETIRDFMARLRSDKSKKGGIDLLQQISAK DLRDVSSEVLIDHMMNSHLCANADYFRRFVRNPRVSNEMITPYKGFFEKAVPEQEREAYLADPMKLVAWVAENIRVDKDC NLGGSPITPEGVWKARTADAHSRDIFFVSMARSMGIPARIDEVTGKVQLMGDEGAVDVNFEAMEQASAPTGKFIARYTPI KSLADPKYYSHFSISRLTPAGTLKLLNYDEGDIDMGGGATWANLLKNGTALDAGNYVMVTGTRLANGGVLSQLTFFTIKP GETTTVDLVMRESKDDIQVIGNFNSESTYKPIDSDELKSILATTGRGYYIVAVLGAGQEPTNHALRDIAALGKEFDEWGR GIVLLFPNEEQYKKFRPQEFPGLPATITYGIDVDGSIQKQIAEGMKLSNKTILPMFIIGDTFNRVVFVSQGYTIGLGEQL MKVIHKL >Mature_887_residues MKLLALCAAGIGLMLCASCTNNKHLISDEAERAAVQQDFEARRDTLAQGDLFQVFEQPMSDEQKEAMTFLYAYMPLADIA DHPGEFYLENVDYAFKAREEMPWGKVVPEREFRHFVLPIRVNNENLDDSRKVFYEELKDRVKNLSLYDAVLEVNHWCHEK VIYTPSDARTSSPLASVKTAYGRCGEESTFTVAALRSVGIPARQVYTPRWAHTDDNHAWVEAWVDGKWYFLGACEPEPVL NLGWFNAPASRGMLMHTKVFGRYNGPEEVMYRTPRYTEINVIDNYAPTAKADVAIVDADGKPVADAKVEFKVYNYAEFYT VASKQTDADGKTFLTAGKGDMLVWASKDGKFGYSKLSFGKDNALTVKLDKTAGEAYTLDMDIIPPVEGANMPEVTPEQRA ENNRRMALEDSIRNAYVATFMTDESARHFAKEYQLDEDVVAKLLVASRGNHETIRDFMARLRSDKSKKGGIDLLQQISAK DLRDVSSEVLIDHMMNSHLCANADYFRRFVRNPRVSNEMITPYKGFFEKAVPEQEREAYLADPMKLVAWVAENIRVDKDC NLGGSPITPEGVWKARTADAHSRDIFFVSMARSMGIPARIDEVTGKVQLMGDEGAVDVNFEAMEQASAPTGKFIARYTPI KSLADPKYYSHFSISRLTPAGTLKLLNYDEGDIDMGGGATWANLLKNGTALDAGNYVMVTGTRLANGGVLSQLTFFTIKP GETTTVDLVMRESKDDIQVIGNFNSESTYKPIDSDELKSILATTGRGYYIVAVLGAGQEPTNHALRDIAALGKEFDEWGR GIVLLFPNEEQYKKFRPQEFPGLPATITYGIDVDGSIQKQIAEGMKLSNKTILPMFIIGDTFNRVVFVSQGYTIGLGEQL MKVIHKL
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99146; Mature: 99146
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLALCAAGIGLMLCASCTNNKHLISDEAERAAVQQDFEARRDTLAQGDLFQVFEQPMS CHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC DEQKEAMTFLYAYMPLADIADHPGEFYLENVDYAFKAREEMPWGKVVPEREFRHFVLPIR CHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCCCEEEEEEE VNNENLDDSRKVFYEELKDRVKNLSLYDAVLEVNHWCHEKVIYTPSDARTSSPLASVKTA ECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHH YGRCGEESTFTVAALRSVGIPARQVYTPRWAHTDDNHAWVEAWVDGKWYFLGACEPEPVL HHCCCCCCCEEHHHHHHCCCCHHHCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCCCCE NLGWFNAPASRGMLMHTKVFGRYNGPEEVMYRTPRYTEINVIDNYAPTAKADVAIVDADG EECCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCEEEEECCC KPVADAKVEFKVYNYAEFYTVASKQTDADGKTFLTAGKGDMLVWASKDGKFGYSKLSFGK CCCCCCEEEEEEEEEEEEEEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCCCEECCCC DNALTVKLDKTAGEAYTLDMDIIPPVEGANMPEVTPEQRAENNRRMALEDSIRNAYVATF CCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHCCCCCEEHHHHHCCEEEEEE MTDESARHFAKEYQLDEDVVAKLLVASRGNHETIRDFMARLRSDKSKKGGIDLLQQISAK EECHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH DLRDVSSEVLIDHMMNSHLCANADYFRRFVRNPRVSNEMITPYKGFFEKAVPEQEREAYL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH ADPMKLVAWVAENIRVDKDCNLGGSPITPEGVWKARTADAHSRDIFFVSMARSMGIPARI HCHHHHHHHHHHHCEECCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEHHHCCCCCEE DEVTGKVQLMGDEGAVDVNFEAMEQASAPTGKFIARYTPIKSLADPKYYSHFSISRLTPA CCCCCEEEEECCCCCEEECHHHHHHCCCCCCCEEEEECCHHHHCCCCHHCCEEEEECCCC GTLKLLNYDEGDIDMGGGATWANLLKNGTALDAGNYVMVTGTRLANGGVLSQLTFFTIKP CEEEEEECCCCCEECCCCHHHHHHHCCCCEECCCCEEEEECCEECCCCCEEEEEEEEECC GETTTVDLVMRESKDDIQVIGNFNSESTYKPIDSDELKSILATTGRGYYIVAVLGAGQEP CCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCC TNHALRDIAALGKEFDEWGRGIVLLFPNEEQYKKFRPQEFPGLPATITYGIDVDGSIQKQ HHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHCCCCCCCCCCEEEEEECCCCCHHHHH IAEGMKLSNKTILPMFIIGDTFNRVVFVSQGYTIGLGEQLMKVIHKL HHHCCCCCCCEEEEEEEECCCCCEEEEEECCCEECHHHHHHHHHHCC >Mature Secondary Structure MKLLALCAAGIGLMLCASCTNNKHLISDEAERAAVQQDFEARRDTLAQGDLFQVFEQPMS CHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC DEQKEAMTFLYAYMPLADIADHPGEFYLENVDYAFKAREEMPWGKVVPEREFRHFVLPIR CHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCCCCCCCCCCCCCEEEEEEE VNNENLDDSRKVFYEELKDRVKNLSLYDAVLEVNHWCHEKVIYTPSDARTSSPLASVKTA ECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHH YGRCGEESTFTVAALRSVGIPARQVYTPRWAHTDDNHAWVEAWVDGKWYFLGACEPEPVL HHCCCCCCCEEHHHHHHCCCCHHHCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCCCCE NLGWFNAPASRGMLMHTKVFGRYNGPEEVMYRTPRYTEINVIDNYAPTAKADVAIVDADG EECCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCEEEEECCC KPVADAKVEFKVYNYAEFYTVASKQTDADGKTFLTAGKGDMLVWASKDGKFGYSKLSFGK CCCCCCEEEEEEEEEEEEEEEECCCCCCCCCEEEEECCCCEEEEECCCCCCCCCEECCCC DNALTVKLDKTAGEAYTLDMDIIPPVEGANMPEVTPEQRAENNRRMALEDSIRNAYVATF CCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHCCCCCEEHHHHHCCEEEEEE MTDESARHFAKEYQLDEDVVAKLLVASRGNHETIRDFMARLRSDKSKKGGIDLLQQISAK EECHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH DLRDVSSEVLIDHMMNSHLCANADYFRRFVRNPRVSNEMITPYKGFFEKAVPEQEREAYL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH ADPMKLVAWVAENIRVDKDCNLGGSPITPEGVWKARTADAHSRDIFFVSMARSMGIPARI HCHHHHHHHHHHHCEECCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEHHHCCCCCEE DEVTGKVQLMGDEGAVDVNFEAMEQASAPTGKFIARYTPIKSLADPKYYSHFSISRLTPA CCCCCEEEEECCCCCEEECHHHHHHCCCCCCCEEEEECCHHHHCCCCHHCCEEEEECCCC GTLKLLNYDEGDIDMGGGATWANLLKNGTALDAGNYVMVTGTRLANGGVLSQLTFFTIKP CEEEEEECCCCCEECCCCHHHHHHHCCCCEECCCCEEEEECCEECCCCCEEEEEEEEECC GETTTVDLVMRESKDDIQVIGNFNSESTYKPIDSDELKSILATTGRGYYIVAVLGAGQEP CCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCC TNHALRDIAALGKEFDEWGRGIVLLFPNEEQYKKFRPQEFPGLPATITYGIDVDGSIQKQ HHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHCCCCCCCCCCEEEEEECCCCCHHHHH IAEGMKLSNKTILPMFIIGDTFNRVVFVSQGYTIGLGEQLMKVIHKL HHHCCCCCCCEEEEEEEECCCCCEEEEEECCCEECHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA