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The map label for this gene is nusB [H]

Identifier: 150006310

GI number: 150006310

Start: 4719907

End: 4720833

Strand: Reverse

Name: nusB [H]

Synonym: BVU_3821

Alternate gene names: 150006310

Gene position: 4720833-4719907 (Counterclockwise)

Preceding gene: 150006315

Following gene: 150006309

Centisome position: 91.43

GC content: 38.3

Gene sequence:

>927_bases
ATGATAAATAGAGTTCTTATTCGTCTTAAGATAGTTCAGATAGTCTATGCTTATTATCAGAACGGAGGCAAAAACTTGGA
TACAGCGGAAAAAGAGTTATTTTTCAGCCTTTCTAAAGCGTATGACTTATACAACTATCTGCTGCTTTTAATGGTAGAGG
TAACTAAACAGGCTAACAAACGACTGAATGCTGCGAAAAACAAACTGGTCCCTACTAAGGAAGAATTGTTTCCCAACACC
AAATTTGTGGAAAACCGCTTTATTGCACAGCTGGAGGTAAACAAACAGCTGCTGGAGTTTTCGAACAATCAGAAGAAAAC
TTGGGAGAATGAAGCTGATTTCGTAAAGACTTTATGTGATAAAATCTTAGAAAGCGATATATATAAGGAATATATGGCCA
GTGAGACTTCTTCGTATGAGGAAGACCGTGAATTGTGGCGCAAGCTATATAAAAATATTATTTTCAATAATATCGAACTG
GATCAGGTTTTGGAGGACCAAAGTTTGTATTGGAATGATGATAAGGAAATCGTGGATACCTTTGTGTTGAAGACCATCAA
GCGTTTCGATGAGAAGAATGGTGCAAAACAGGAATTGTTGCCGGAATTTAAAGATGAGGAGGATCAAGACTTCGCGCGCC
GTTTGTTCCGTCGTACTATCTTGAATGCCGATTATTATCGTCATCTGATTAGCGAAAATACAAAGAACTGGGATTTAGAC
CGTGTGGCTTTCATGGATGTGGTCATTATGCAGATCGCTTTGGCTGAAATCCTGAGTTTTCCCAATATCCCGGTCAGCGT
TTCACTGAATGAGTACGTGGAAATAGCCAAACTGTACAGCACTCCGAAAAGCGGTGGCTTTATTAACGGTACTTTGGATG
GAATCGTTAATTCATTAAAAAAAGAGAATAAGCTAACAAAAAATTAA

Upstream 100 bases:

>100_bases
GATAGCTCTATGTAAATTTTACATTAAAAAATGTAATTATGTTATGTAAAATCAATGAAAATACCTACTTTTGCAACTCC
TTAATAATTTTATGTGAATT

Downstream 100 bases:

>100_bases
TATCTTTGTTTGTTATTGAAGAATAACGGTATTATAAACTAAAAAACATAGAAAGTATGAACTTATTATTTGTATTTCTG
CAGGCAGGGGGTGGAGGAGA

Product: putative N utilization substance protein

Products: NA

Alternate protein names: Protein nusB [H]

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MINRVLIRLKIVQIVYAYYQNGGKNLDTAEKELFFSLSKAYDLYNYLLLLMVEVTKQANKRLNAAKNKLVPTKEELFPNT
KFVENRFIAQLEVNKQLLEFSNNQKKTWENEADFVKTLCDKILESDIYKEYMASETSSYEEDRELWRKLYKNIIFNNIEL
DQVLEDQSLYWNDDKEIVDTFVLKTIKRFDEKNGAKQELLPEFKDEEDQDFARRLFRRTILNADYYRHLISENTKNWDLD
RVAFMDVVIMQIALAEILSFPNIPVSVSLNEYVEIAKLYSTPKSGGFINGTLDGIVNSLKKENKLTKN

Sequences:

>Translated_308_residues
MINRVLIRLKIVQIVYAYYQNGGKNLDTAEKELFFSLSKAYDLYNYLLLLMVEVTKQANKRLNAAKNKLVPTKEELFPNT
KFVENRFIAQLEVNKQLLEFSNNQKKTWENEADFVKTLCDKILESDIYKEYMASETSSYEEDRELWRKLYKNIIFNNIEL
DQVLEDQSLYWNDDKEIVDTFVLKTIKRFDEKNGAKQELLPEFKDEEDQDFARRLFRRTILNADYYRHLISENTKNWDLD
RVAFMDVVIMQIALAEILSFPNIPVSVSLNEYVEIAKLYSTPKSGGFINGTLDGIVNSLKKENKLTKN
>Mature_308_residues
MINRVLIRLKIVQIVYAYYQNGGKNLDTAEKELFFSLSKAYDLYNYLLLLMVEVTKQANKRLNAAKNKLVPTKEELFPNT
KFVENRFIAQLEVNKQLLEFSNNQKKTWENEADFVKTLCDKILESDIYKEYMASETSSYEEDRELWRKLYKNIIFNNIEL
DQVLEDQSLYWNDDKEIVDTFVLKTIKRFDEKNGAKQELLPEFKDEEDQDFARRLFRRTILNADYYRHLISENTKNWDLD
RVAFMDVVIMQIALAEILSFPNIPVSVSLNEYVEIAKLYSTPKSGGFINGTLDGIVNSLKKENKLTKN

Specific function: Involved in the transcription termination process [H]

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011605
- InterPro:   IPR006027 [H]

Pfam domain/function: PF01029 NusB [H]

EC number: NA

Molecular weight: Translated: 36290; Mature: 36290

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINRVLIRLKIVQIVYAYYQNGGKNLDTAEKELFFSLSKAYDLYNYLLLLMVEVTKQANK
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLNAAKNKLVPTKEELFPNTKFVENRFIAQLEVNKQLLEFSNNQKKTWENEADFVKTLCD
HHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
KILESDIYKEYMASETSSYEEDRELWRKLYKNIIFNNIELDQVLEDQSLYWNDDKEIVDT
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHH
FVLKTIKRFDEKNGAKQELLPEFKDEEDQDFARRLFRRTILNADYYRHLISENTKNWDLD
HHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHH
RVAFMDVVIMQIALAEILSFPNIPVSVSLNEYVEIAKLYSTPKSGGFINGTLDGIVNSLK
HHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
KENKLTKN
HHCCCCCC
>Mature Secondary Structure
MINRVLIRLKIVQIVYAYYQNGGKNLDTAEKELFFSLSKAYDLYNYLLLLMVEVTKQANK
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLNAAKNKLVPTKEELFPNTKFVENRFIAQLEVNKQLLEFSNNQKKTWENEADFVKTLCD
HHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
KILESDIYKEYMASETSSYEEDRELWRKLYKNIIFNNIELDQVLEDQSLYWNDDKEIVDT
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHH
FVLKTIKRFDEKNGAKQELLPEFKDEEDQDFARRLFRRTILNADYYRHLISENTKNWDLD
HHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHH
RVAFMDVVIMQIALAEILSFPNIPVSVSLNEYVEIAKLYSTPKSGGFINGTLDGIVNSLK
HHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
KENKLTKN
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA