| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006288
Identifier: 150006288
GI number: 150006288
Start: 4693218
End: 4694906
Strand: Reverse
Name: 150006288
Synonym: BVU_3799
Alternate gene names: NA
Gene position: 4694906-4693218 (Counterclockwise)
Preceding gene: 150006289
Following gene: 150006287
Centisome position: 90.93
GC content: 37.66
Gene sequence:
>1689_bases ATGAATGAAGTAAAAAAAGTAATATTGTTTTTATTATGCTGTGCTATACCTTTTAGTTTTTATGCACAGAAGGCGCGCCA AAATGCTGTAACAAAGAAATGGGGATATGAGCAGACCGAAAATAAAGGATGGTGGGAAAATTCAAAATATAGGGGTAATT CTATGTTTGGTGGATGGGATGCGGCTTTAGTAAATCAGGATTATGAGATAAATTGGTTGATTTCTCCACAATATGAAGGG GTGACCAAGAGATTTACAGAAAAGTTGGCAGGAGTAGTTTTAGGAGGAAAAGTAGGTTTTATAGACATACACAATCGTTT TATAATTAAACCGCAGTTTGAAAATGCAGATGATATTCATGGATTTAATTTAGGACTGTCTGCGGTAAAGAAGAATGGCA AGTTTGGCTTTATAAATAAAAAAGGAGAATTTGTCATTGAACCTCAATTTGATTACGCTGATAATTTTAGAGATAACATG TTGGCTACAATCAAGCAAGATGGTAAGTTCGGGGCTATTAATTTAAGGGGAGAAATCGTTGTCCCATGTAAATATATTCT AGAAGAAGCAATGATAAGCGTTCCTATATCCAATAAGGTATATCGCCAGAAACAAGAAGAAGTGAAAAATGCGAAAGGGA ACGGTGATTTTGATGATTTGCTTGATAAAATCGCTGAATGTAGCAGAGAGGTCAATGAAAAAATTAATAATCCTGGAGCA GAAGTTATAACCGATTCTCTCAGAATAAGGGAAGATAATGGTAAAATGGGCCTTGTAGTGGGAGGACAAACTGTAATTCC TACAGAATATGAGGAACTTATAATAGCAGAAGATGGATTTGTTCTTGCTTGCAAGCAGGATAAATGGGGGGCTTTGGATA TATATGGGCGTACTATATTGCCTTGTGTTTATCAATGGGTATATTATGATGTATCGGCAAAGGTCTGGATTGCCAAAAGT CTTGCAATGGGGCTATATAATAGTCAAGGTGCTTTATTACTACCGGGAAGGATTGATTATATAGGTAGTTTTGTGGATGG CAAAGCACCTGTTTGGCTGAATTCCGTACTCGGTTGGATAGATACGAAGGGACAACTCTCTGATGGCTTTGCAGAGGATG TGACAGAATCCTTTTTGAAAGAAGAAAAAAAGGGAGTGGCAGGTGCTTGGGGTATGTTTAATTTATTGACAGATTTGATT CCGGACTATGCCATGGCCCACTATTATATGGGAAAAGGGCAAGTGACTGATGGCATTTATTCTAAAGGAATGGAGCATCT GAAGATAGCGGCAGAATTGGATCCGGATAATGGAGAAGTAGCGTTAGCGCTGAAGCAAGCCAAAAAGGACAAGAAGAAAA GAACGTTGAATACGATTGGTTACATTGCAAGTGTGCATAATGATTTGGAATCTACAAACTCTAATTCTTTTAAAGATGAA AGCAGAAATCAAAATAAGCCTTCATCCGGAATTAATCTGGGAGTTTCTATGGATGAGGTAGATGCCCTTGGTGGGTCTAC AGCTACTGCTATAGCAGGAGGTAGTAATCATTGTGGTTTTTTGAAATATGTGTTAGAAGATCTTGAAGAAAAGATTCAGA AGAATACGGGCGAATTGATGGGAGAGTATTATCGGAAAGTGAAGGATGAATATTTGCAGTTTGCCGGTAAAGAAGGGTGT GAACAATAA
Upstream 100 bases:
>100_bases TTGTTAGGCTGTTTGATACTTTCTCTTGGTTTTGTGAATTTGTAAAATGACGTTAATTGTTTTTCTTTGAAGCCGCATAA GGTTAAAAAAAGACATGTAT
Downstream 100 bases:
>100_bases TATATAATTAAAGAATAGAATTATGAGAGTAATGAATGTGAAATTTGTCGGTAGAATCATTATGACGGTTCTTTTTGTAT TCATCTGTATTGGAGCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MNEVKKVILFLLCCAIPFSFYAQKARQNAVTKKWGYEQTENKGWWENSKYRGNSMFGGWDAALVNQDYEINWLISPQYEG VTKRFTEKLAGVVLGGKVGFIDIHNRFIIKPQFENADDIHGFNLGLSAVKKNGKFGFINKKGEFVIEPQFDYADNFRDNM LATIKQDGKFGAINLRGEIVVPCKYILEEAMISVPISNKVYRQKQEEVKNAKGNGDFDDLLDKIAECSREVNEKINNPGA EVITDSLRIREDNGKMGLVVGGQTVIPTEYEELIIAEDGFVLACKQDKWGALDIYGRTILPCVYQWVYYDVSAKVWIAKS LAMGLYNSQGALLLPGRIDYIGSFVDGKAPVWLNSVLGWIDTKGQLSDGFAEDVTESFLKEEKKGVAGAWGMFNLLTDLI PDYAMAHYYMGKGQVTDGIYSKGMEHLKIAAELDPDNGEVALALKQAKKDKKKRTLNTIGYIASVHNDLESTNSNSFKDE SRNQNKPSSGINLGVSMDEVDALGGSTATAIAGGSNHCGFLKYVLEDLEEKIQKNTGELMGEYYRKVKDEYLQFAGKEGC EQ
Sequences:
>Translated_562_residues MNEVKKVILFLLCCAIPFSFYAQKARQNAVTKKWGYEQTENKGWWENSKYRGNSMFGGWDAALVNQDYEINWLISPQYEG VTKRFTEKLAGVVLGGKVGFIDIHNRFIIKPQFENADDIHGFNLGLSAVKKNGKFGFINKKGEFVIEPQFDYADNFRDNM LATIKQDGKFGAINLRGEIVVPCKYILEEAMISVPISNKVYRQKQEEVKNAKGNGDFDDLLDKIAECSREVNEKINNPGA EVITDSLRIREDNGKMGLVVGGQTVIPTEYEELIIAEDGFVLACKQDKWGALDIYGRTILPCVYQWVYYDVSAKVWIAKS LAMGLYNSQGALLLPGRIDYIGSFVDGKAPVWLNSVLGWIDTKGQLSDGFAEDVTESFLKEEKKGVAGAWGMFNLLTDLI PDYAMAHYYMGKGQVTDGIYSKGMEHLKIAAELDPDNGEVALALKQAKKDKKKRTLNTIGYIASVHNDLESTNSNSFKDE SRNQNKPSSGINLGVSMDEVDALGGSTATAIAGGSNHCGFLKYVLEDLEEKIQKNTGELMGEYYRKVKDEYLQFAGKEGC EQ >Mature_562_residues MNEVKKVILFLLCCAIPFSFYAQKARQNAVTKKWGYEQTENKGWWENSKYRGNSMFGGWDAALVNQDYEINWLISPQYEG VTKRFTEKLAGVVLGGKVGFIDIHNRFIIKPQFENADDIHGFNLGLSAVKKNGKFGFINKKGEFVIEPQFDYADNFRDNM LATIKQDGKFGAINLRGEIVVPCKYILEEAMISVPISNKVYRQKQEEVKNAKGNGDFDDLLDKIAECSREVNEKINNPGA EVITDSLRIREDNGKMGLVVGGQTVIPTEYEELIIAEDGFVLACKQDKWGALDIYGRTILPCVYQWVYYDVSAKVWIAKS LAMGLYNSQGALLLPGRIDYIGSFVDGKAPVWLNSVLGWIDTKGQLSDGFAEDVTESFLKEEKKGVAGAWGMFNLLTDLI PDYAMAHYYMGKGQVTDGIYSKGMEHLKIAAELDPDNGEVALALKQAKKDKKKRTLNTIGYIASVHNDLESTNSNSFKDE SRNQNKPSSGINLGVSMDEVDALGGSTATAIAGGSNHCGFLKYVLEDLEEKIQKNTGELMGEYYRKVKDEYLQFAGKEGC EQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62726; Mature: 62726
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS50005 TPR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEVKKVILFLLCCAIPFSFYAQKARQNAVTKKWGYEQTENKGWWENSKYRGNSMFGGWD CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC AALVNQDYEINWLISPQYEGVTKRFTEKLAGVVLGGKVGFIDIHNRFIIKPQFENADDIH HHHCCCCEEEEEEECCCCCHHHHHHHHHHHCEEECCEEEEEEECCEEEEEECCCCCCCCC GFNLGLSAVKKNGKFGFINKKGEFVIEPQFDYADNFRDNMLATIKQDGKFGAINLRGEIV CCCCCHHHHHCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHEECCCCEEEEEECCCEE VPCKYILEEAMISVPISNKVYRQKQEEVKNAKGNGDFDDLLDKIAECSREVNEKINNPGA ECHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH EVITDSLRIREDNGKMGLVVGGQTVIPTEYEELIIAEDGFVLACKQDKWGALDIYGRTIL HHEECCEEEEECCCCEEEEECCCEECCCCCCCEEEECCCEEEEECCCCCCEEEECCCHHH PCVYQWVYYDVSAKVWIAKSLAMGLYNSQGALLLPGRIDYIGSFVDGKAPVWLNSVLGWI HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCCCCCHHHHHHHHHH DTKGQLSDGFAEDVTESFLKEEKKGVAGAWGMFNLLTDLIPDYAMAHYYMGKGQVTDGIY CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHH SKGMEHLKIAAELDPDNGEVALALKQAKKDKKKRTLNTIGYIASVHNDLESTNSNSFKDE HCCHHHEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SRNQNKPSSGINLGVSMDEVDALGGSTATAIAGGSNHCGFLKYVLEDLEEKIQKNTGELM CCCCCCCCCCCEECCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH GEYYRKVKDEYLQFAGKEGCEQ HHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNEVKKVILFLLCCAIPFSFYAQKARQNAVTKKWGYEQTENKGWWENSKYRGNSMFGGWD CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC AALVNQDYEINWLISPQYEGVTKRFTEKLAGVVLGGKVGFIDIHNRFIIKPQFENADDIH HHHCCCCEEEEEEECCCCCHHHHHHHHHHHCEEECCEEEEEEECCEEEEEECCCCCCCCC GFNLGLSAVKKNGKFGFINKKGEFVIEPQFDYADNFRDNMLATIKQDGKFGAINLRGEIV CCCCCHHHHHCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHEECCCCEEEEEECCCEE VPCKYILEEAMISVPISNKVYRQKQEEVKNAKGNGDFDDLLDKIAECSREVNEKINNPGA ECHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH EVITDSLRIREDNGKMGLVVGGQTVIPTEYEELIIAEDGFVLACKQDKWGALDIYGRTIL HHEECCEEEEECCCCEEEEECCCEECCCCCCCEEEECCCEEEEECCCCCCEEEECCCHHH PCVYQWVYYDVSAKVWIAKSLAMGLYNSQGALLLPGRIDYIGSFVDGKAPVWLNSVLGWI HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCCCCCHHHHHHHHHH DTKGQLSDGFAEDVTESFLKEEKKGVAGAWGMFNLLTDLIPDYAMAHYYMGKGQVTDGIY CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHH SKGMEHLKIAAELDPDNGEVALALKQAKKDKKKRTLNTIGYIASVHNDLESTNSNSFKDE HCCHHHEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SRNQNKPSSGINLGVSMDEVDALGGSTATAIAGGSNHCGFLKYVLEDLEEKIQKNTGELM CCCCCCCCCCCEECCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH GEYYRKVKDEYLQFAGKEGCEQ HHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA